EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000002577 (Gene tree)
Gene ID: 106954576
Gene Symbol: si:ch211-212k18.5
Alias: -
Full Name: spalt like transcription factor 2
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 5272 bases
Position: chrKQ545979.1:211047-216318
Accession: 106954576
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000001509	zf-C2H2	PF00096.26	4.3e-18	1	2
ENSPLAP00000001509	zf-C2H2	PF00096.26	4.3e-18	2	2
ENSPLAP00000001509	zf-met	PF12874.7	1.2e-10	1	2
ENSPLAP00000001509	zf-met	PF12874.7	1.2e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000014626	-	3633	XM_015044194	ENSPLAP00000001509	1210 (aa)	XP_014899680	UPI00072E9DFB

Gene Model

Click here to download ENSPLAG00000002577's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000002577's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000002577	si:ch211-212k18.5	54	46.854	ENSPLAG00000018320	sall2	58	47.027

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000002577	si:ch211-212k18.5	72	64.865	ENSAPOG00000015347	sall2	53	47.299	Acanthochromis_polyacanthus
ENSPLAG00000002577	si:ch211-212k18.5	99	74.125	ENSAPOG00000013387	si:ch211-212k18.5	99	73.874	Acanthochromis_polyacanthus
ENSPLAG00000002577	si:ch211-212k18.5	80	80.309	ENSACIG00000019922	si:ch211-212k18.5	99	81.321	Amphilophus_citrinellus
ENSPLAG00000002577	si:ch211-212k18.5	99	71.893	ENSAOCG00000010737	si:ch211-212k18.5	99	72.118	Amphiprion_ocellaris
ENSPLAG00000002577	si:ch211-212k18.5	72	64.865	ENSAOCG00000016559	sall2	53	47.113	Amphiprion_ocellaris
ENSPLAG00000002577	si:ch211-212k18.5	99	72.136	ENSAPEG00000006751	si:ch211-212k18.5	99	72.363	Amphiprion_percula
ENSPLAG00000002577	si:ch211-212k18.5	54	45.902	ENSAPEG00000020215	sall2	84	47.051	Amphiprion_percula
ENSPLAG00000002577	si:ch211-212k18.5	79	81.395	ENSATEG00000001254	si:ch211-212k18.5	99	81.744	Anabas_testudineus
ENSPLAG00000002577	si:ch211-212k18.5	99	72.496	ENSACLG00000009709	si:ch211-212k18.5	99	72.795	Astatotilapia_calliptera
ENSPLAG00000002577	si:ch211-212k18.5	95	56.181	ENSAMXG00000010979	si:ch211-212k18.5	99	55.455	Astyanax_mexicanus
ENSPLAG00000002577	si:ch211-212k18.5	54	48.927	ENSAMXG00000020956	sall2	58	48.196	Astyanax_mexicanus
ENSPLAG00000002577	si:ch211-212k18.5	80	39.153	ENSCSEG00000021148	sall2	79	38.919	Cynoglossus_semilaevis
ENSPLAG00000002577	si:ch211-212k18.5	99	68.123	ENSCSEG00000004426	si:ch211-212k18.5	99	68.078	Cynoglossus_semilaevis
ENSPLAG00000002577	si:ch211-212k18.5	65	47.889	ENSCVAG00000006032	sall2	69	44.650	Cyprinodon_variegatus
ENSPLAG00000002577	si:ch211-212k18.5	99	87.262	ENSCVAG00000007475	si:ch211-212k18.5	99	87.427	Cyprinodon_variegatus
ENSPLAG00000002577	si:ch211-212k18.5	99	53.577	ENSDARG00000103316	si:ch211-212k18.5	95	54.359	Danio_rerio
ENSPLAG00000002577	si:ch211-212k18.5	59	59.184	ENSDARG00000075116	sall2	64	59.184	Danio_rerio
ENSPLAG00000002577	si:ch211-212k18.5	99	55.868	ENSELUG00000024534	si:ch211-212k18.5	99	56.064	Esox_lucius
ENSPLAG00000002577	si:ch211-212k18.5	70	48.346	ENSELUG00000004389	sall2	73	46.770	Esox_lucius
ENSPLAG00000002577	si:ch211-212k18.5	99	87.593	ENSFHEG00000017264	si:ch211-212k18.5	99	87.677	Fundulus_heteroclitus
ENSPLAG00000002577	si:ch211-212k18.5	54	46.789	ENSFHEG00000017550	sall2	59	46.296	Fundulus_heteroclitus
ENSPLAG00000002577	si:ch211-212k18.5	54	47.733	ENSGAFG00000015194	sall2	58	46.748	Gambusia_affinis
ENSPLAG00000002577	si:ch211-212k18.5	100	94.959	ENSGAFG00000003746	si:ch211-212k18.5	99	94.255	Gambusia_affinis
ENSPLAG00000002577	si:ch211-212k18.5	99	72.660	ENSHBUG00000019672	si:ch211-212k18.5	100	72.868	Haplochromis_burtoni
ENSPLAG00000002577	si:ch211-212k18.5	98	59.030	ENSHCOG00000002842	si:ch211-212k18.5	99	57.789	Hippocampus_comes
ENSPLAG00000002577	si:ch211-212k18.5	99	51.875	ENSIPUG00000002559	sall2	99	51.404	Ictalurus_punctatus
ENSPLAG00000002577	si:ch211-212k18.5	100	74.572	ENSKMAG00000019657	si:ch211-212k18.5	99	75.268	Kryptolebias_marmoratus
ENSPLAG00000002577	si:ch211-212k18.5	56	69.697	ENSKMAG00000020172	sall2	62	55.102	Kryptolebias_marmoratus
ENSPLAG00000002577	si:ch211-212k18.5	100	69.519	ENSLBEG00000020887	si:ch211-212k18.5	99	69.250	Labrus_bergylta
ENSPLAG00000002577	si:ch211-212k18.5	70	84.813	ENSMAMG00000015887	si:ch211-212k18.5	99	84.112	Mastacembelus_armatus
ENSPLAG00000002577	si:ch211-212k18.5	59	55.769	ENSMAMG00000016229	sall2	63	55.769	Mastacembelus_armatus
ENSPLAG00000002577	si:ch211-212k18.5	99	72.578	ENSMZEG00005021214	si:ch211-212k18.5	99	72.877	Maylandia_zebra
ENSPLAG00000002577	si:ch211-212k18.5	95	80.787	ENSMMOG00000012726	si:ch211-212k18.5	99	79.888	Mola_mola
ENSPLAG00000002577	si:ch211-212k18.5	92	73.890	ENSMALG00000000979	si:ch211-212k18.5	97	73.542	Monopterus_albus
ENSPLAG00000002577	si:ch211-212k18.5	94	69.224	ENSNBRG00000023948	si:ch211-212k18.5	96	68.750	Neolamprologus_brichardi
ENSPLAG00000002577	si:ch211-212k18.5	55	45.478	ENSORLG00000026871	sall2	59	47.020	Oryzias_latipes
ENSPLAG00000002577	si:ch211-212k18.5	99	69.619	ENSORLG00000030429	si:ch211-212k18.5	99	69.123	Oryzias_latipes
ENSPLAG00000002577	si:ch211-212k18.5	55	45.478	ENSORLG00020007873	sall2	59	46.447	Oryzias_latipes_hni
ENSPLAG00000002577	si:ch211-212k18.5	99	69.428	ENSORLG00020008145	si:ch211-212k18.5	99	69.536	Oryzias_latipes_hni
ENSPLAG00000002577	si:ch211-212k18.5	55	45.085	ENSORLG00015002422	sall2	59	46.623	Oryzias_latipes_hsok
ENSPLAG00000002577	si:ch211-212k18.5	99	68.683	ENSORLG00015004982	si:ch211-212k18.5	99	69.205	Oryzias_latipes_hsok
ENSPLAG00000002577	si:ch211-212k18.5	56	45.133	ENSOMEG00000012904	sall2	65	54.348	Oryzias_melastigma
ENSPLAG00000002577	si:ch211-212k18.5	99	68.684	ENSOMEG00000013949	si:ch211-212k18.5	99	69.597	Oryzias_melastigma
ENSPLAG00000002577	si:ch211-212k18.5	72	51.772	ENSPKIG00000009207	sall2	92	44.053	Paramormyrops_kingsleyae
ENSPLAG00000002577	si:ch211-212k18.5	94	64.891	ENSPMGG00000018714	si:ch211-212k18.5	99	64.685	Periophthalmus_magnuspinnatus
ENSPLAG00000002577	si:ch211-212k18.5	100	99.256	ENSPFOG00000023705	si:ch211-212k18.5	100	99.256	Poecilia_formosa
ENSPLAG00000002577	si:ch211-212k18.5	54	46.986	ENSPFOG00000016504	sall2	60	47.566	Poecilia_formosa
ENSPLAG00000002577	si:ch211-212k18.5	100	99.091	ENSPMEG00000016395	si:ch211-212k18.5	100	99.091	Poecilia_mexicana
ENSPLAG00000002577	si:ch211-212k18.5	57	66.667	ENSPMEG00000006335	sall2	58	46.955	Poecilia_mexicana
ENSPLAG00000002577	si:ch211-212k18.5	57	66.667	ENSPREG00000021908	sall2	51	46.667	Poecilia_reticulata
ENSPLAG00000002577	si:ch211-212k18.5	100	97.025	ENSPREG00000005292	si:ch211-212k18.5	100	97.025	Poecilia_reticulata
ENSPLAG00000002577	si:ch211-212k18.5	99	69.212	ENSPNYG00000021576	si:ch211-212k18.5	99	69.497	Pundamilia_nyererei
ENSPLAG00000002577	si:ch211-212k18.5	99	54.140	ENSPNAG00000006123	si:ch211-212k18.5	99	54.362	Pygocentrus_nattereri
ENSPLAG00000002577	si:ch211-212k18.5	54	48.169	ENSPNAG00000021463	sall2	58	47.721	Pygocentrus_nattereri
ENSPLAG00000002577	si:ch211-212k18.5	73	56.000	ENSSMAG00000014157	sall2	70	56.000	Scophthalmus_maximus
ENSPLAG00000002577	si:ch211-212k18.5	100	71.672	ENSSMAG00000006241	si:ch211-212k18.5	99	71.546	Scophthalmus_maximus
ENSPLAG00000002577	si:ch211-212k18.5	100	75.223	ENSSDUG00000006164	si:ch211-212k18.5	99	74.551	Seriola_dumerili
ENSPLAG00000002577	si:ch211-212k18.5	70	44.364	ENSSDUG00000012274	sall2	53	46.579	Seriola_dumerili
ENSPLAG00000002577	si:ch211-212k18.5	100	76.923	ENSSLDG00000003393	si:ch211-212k18.5	99	76.183	Seriola_lalandi_dorsalis
ENSPLAG00000002577	si:ch211-212k18.5	70	44.995	ENSSLDG00000001653	sall2	53	47.751	Seriola_lalandi_dorsalis
ENSPLAG00000002577	si:ch211-212k18.5	94	73.339	ENSSPAG00000013435	si:ch211-212k18.5	97	72.821	Stegastes_partitus
ENSPLAG00000002577	si:ch211-212k18.5	54	47.444	ENSSPAG00000023009	sall2	53	47.215	Stegastes_partitus
ENSPLAG00000002577	si:ch211-212k18.5	95	70.051	ENSTRUG00000025082	si:ch211-212k18.5	98	69.130	Takifugu_rubripes
ENSPLAG00000002577	si:ch211-212k18.5	58	45.873	ENSTRUG00000024556	sall2	58	46.008	Takifugu_rubripes
ENSPLAG00000002577	si:ch211-212k18.5	100	94.055	ENSXCOG00000000762	si:ch211-212k18.5	100	94.055	Xiphophorus_couchianus
ENSPLAG00000002577	si:ch211-212k18.5	54	46.053	ENSXMAG00000000902	sall2	58	46.237	Xiphophorus_maculatus
ENSPLAG00000002577	si:ch211-212k18.5	100	96.201	ENSXMAG00000001461	si:ch211-212k18.5	100	96.201	Xiphophorus_maculatus