EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000002600 (Gene tree)
Gene ID: 106938065
Gene Symbol: RAB29
Alias: -
Full Name: RAB29%2C member RAS oncogene family
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 5534 bases
Position: chrKQ547799.1:52938-58471
Accession: 106938065
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000001524	MMR_HSR1	PF01926.23	3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000014598	RAB29-201	642	XM_015019894	ENSPLAP00000001524	213 (aa)	XP_014875380	-

Gene Model

Click here to download ENSPLAG00000002600's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000002600's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000002600	RAB29	95	31.863	ENSPLAG00000018655	rab1ba	97	31.863
ENSPLAG00000002600	RAB29	86	34.054	ENSPLAG00000014243	rab11ba	81	34.054
ENSPLAG00000002600	RAB29	73	37.267	ENSPLAG00000016172	-	65	37.267
ENSPLAG00000002600	RAB29	84	33.702	ENSPLAG00000014563	rab4a	82	33.702
ENSPLAG00000002600	RAB29	95	34.483	ENSPLAG00000006777	-	88	34.483
ENSPLAG00000002600	RAB29	93	33.333	ENSPLAG00000001598	rab11bb	87	33.333
ENSPLAG00000002600	RAB29	94	36.190	ENSPLAG00000006354	rab15	96	36.190
ENSPLAG00000002600	RAB29	95	32.353	ENSPLAG00000020989	rab35b	97	32.353
ENSPLAG00000002600	RAB29	71	33.117	ENSPLAG00000020627	zgc:101559	64	33.117
ENSPLAG00000002600	RAB29	94	31.034	ENSPLAG00000016333	-	89	31.034
ENSPLAG00000002600	RAB29	80	32.558	ENSPLAG00000022260	rab6ba	80	32.558
ENSPLAG00000002600	RAB29	86	34.054	ENSPLAG00000014207	-	81	34.054
ENSPLAG00000002600	RAB29	53	32.174	ENSPLAG00000011855	si:ch73-116o1.2	77	31.138
ENSPLAG00000002600	RAB29	78	33.533	ENSPLAG00000017838	rab5aa	75	33.533
ENSPLAG00000002600	RAB29	95	32.195	ENSPLAG00000015592	-	97	32.195
ENSPLAG00000002600	RAB29	82	32.203	ENSPLAG00000017232	rab22a	93	32.203
ENSPLAG00000002600	RAB29	77	31.707	ENSPLAG00000019688	si:dkey-13a21.4	79	31.707
ENSPLAG00000002600	RAB29	78	32.738	ENSPLAG00000018718	rab22a	83	32.738
ENSPLAG00000002600	RAB29	83	34.078	ENSPLAG00000015383	rab30	85	34.078
ENSPLAG00000002600	RAB29	58	31.452	ENSPLAG00000007941	-	62	31.452
ENSPLAG00000002600	RAB29	88	31.383	ENSPLAG00000019707	rab6bb	83	31.383
ENSPLAG00000002600	RAB29	77	31.288	ENSPLAG00000015685	rabl2	70	31.288
ENSPLAG00000002600	RAB29	83	31.844	ENSPLAG00000004551	-	80	31.844
ENSPLAG00000002600	RAB29	79	36.095	ENSPLAG00000003181	-	82	36.095
ENSPLAG00000002600	RAB29	89	31.980	ENSPLAG00000002799	RAB7A	95	31.980
ENSPLAG00000002600	RAB29	85	36.111	ENSPLAG00000022926	rab9a	89	36.111
ENSPLAG00000002600	RAB29	82	34.286	ENSPLAG00000018322	-	80	34.286
ENSPLAG00000002600	RAB29	96	33.816	ENSPLAG00000011175	rab11a	94	33.816
ENSPLAG00000002600	RAB29	79	37.278	ENSPLAG00000013594	rab12	71	36.464
ENSPLAG00000002600	RAB29	79	35.294	ENSPLAG00000006520	rab1ab	80	35.294
ENSPLAG00000002600	RAB29	83	32.402	ENSPLAG00000022515	-	80	32.402
ENSPLAG00000002600	RAB29	79	37.059	ENSPLAG00000005628	rab42a	76	37.059
ENSPLAG00000002600	RAB29	83	33.898	ENSPLAG00000007237	RAB39B	81	33.898
ENSPLAG00000002600	RAB29	81	33.333	ENSPLAG00000007986	rab11al	78	33.333
ENSPLAG00000002600	RAB29	94	32.178	ENSPLAG00000000376	rab41	91	32.178
ENSPLAG00000002600	RAB29	80	34.302	ENSPLAG00000021278	rab33ba	69	34.302
ENSPLAG00000002600	RAB29	78	33.533	ENSPLAG00000004790	rab5c	89	30.952
ENSPLAG00000002600	RAB29	57	33.607	ENSPLAG00000004167	arl8a	61	33.607
ENSPLAG00000002600	RAB29	82	35.632	ENSPLAG00000011866	rab9b	78	35.632
ENSPLAG00000002600	RAB29	78	34.731	ENSPLAG00000010104	rab18a	79	34.731
ENSPLAG00000002600	RAB29	77	36.095	ENSPLAG00000021043	si:dkey-16l2.16	78	36.095
ENSPLAG00000002600	RAB29	94	33.000	ENSPLAG00000019136	rab18b	93	33.000
ENSPLAG00000002600	RAB29	89	32.990	ENSPLAG00000005189	rab33a	84	32.990
ENSPLAG00000002600	RAB29	82	31.694	ENSPLAG00000011697	rab23	92	32.308
ENSPLAG00000002600	RAB29	58	30.645	ENSPLAG00000020975	arl8ba	62	30.645
ENSPLAG00000002600	RAB29	95	30.876	ENSPLAG00000023374	rab2a	98	30.876
ENSPLAG00000002600	RAB29	89	31.980	ENSPLAG00000001065	-	95	31.980
ENSPLAG00000002600	RAB29	79	36.095	ENSPLAG00000005832	RAB13	91	35.393
ENSPLAG00000002600	RAB29	79	34.911	ENSPLAG00000005869	zgc:171927	76	34.911
ENSPLAG00000002600	RAB29	78	30.233	ENSPLAG00000008845	dnajc27	61	30.233
ENSPLAG00000002600	RAB29	57	31.148	ENSPLAG00000019120	-	61	31.148
ENSPLAG00000002600	RAB29	83	36.158	ENSPLAG00000007015	rab9a	83	36.158
ENSPLAG00000002600	RAB29	94	30.846	ENSPLAG00000019570	rab6a	94	30.846
ENSPLAG00000002600	RAB29	95	32.212	ENSPLAG00000023128	RAB15	96	32.212
ENSPLAG00000002600	RAB29	58	30.000	ENSPLAG00000002398	rasl11b	51	30.000
ENSPLAG00000002600	RAB29	80	32.203	ENSPLAG00000007773	si:dkey-34d22.5	78	32.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000002600	RAB29	95	67.488	ENSATEG00000024739	RAB29	99	67.488	Anabas_testudineus
ENSPLAG00000002600	RAB29	76	77.160	ENSACLG00000008602	RAB29	98	77.160	Astatotilapia_calliptera
ENSPLAG00000002600	RAB29	95	75.862	ENSCVAG00000014038	RAB29	99	75.862	Cyprinodon_variegatus
ENSPLAG00000002600	RAB29	95	49.010	ENSEBUG00000002259	RAB29	96	49.010	Eptatretus_burgeri
ENSPLAG00000002600	RAB29	88	67.368	ENSFHEG00000015993	RAB29	93	67.368	Fundulus_heteroclitus
ENSPLAG00000002600	RAB29	76	68.944	ENSGMOG00000018475	RAB29	97	68.944	Gadus_morhua
ENSPLAG00000002600	RAB29	97	83.981	ENSGAFG00000000629	RAB29	100	83.981	Gambusia_affinis
ENSPLAG00000002600	RAB29	95	64.532	ENSGACG00000010473	RAB29	97	64.532	Gasterosteus_aculeatus
ENSPLAG00000002600	RAB29	95	70.098	ENSHBUG00000012594	RAB29	99	70.098	Haplochromis_burtoni
ENSPLAG00000002600	RAB29	92	68.367	ENSKMAG00000017150	-	88	68.367	Kryptolebias_marmoratus
ENSPLAG00000002600	RAB29	95	67.980	ENSLBEG00000006152	-	99	67.980	Labrus_bergylta
ENSPLAG00000002600	RAB29	95	67.980	ENSLBEG00000018812	RAB29	99	67.980	Labrus_bergylta
ENSPLAG00000002600	RAB29	81	58.960	ENSLACG00000002523	RAB29	84	58.960	Latimeria_chalumnae
ENSPLAG00000002600	RAB29	95	66.829	ENSMAMG00000006963	RAB29	99	66.829	Mastacembelus_armatus
ENSPLAG00000002600	RAB29	95	69.118	ENSMZEG00005026799	RAB29	99	69.118	Maylandia_zebra
ENSPLAG00000002600	RAB29	95	68.473	ENSMALG00000018436	RAB29	89	68.473	Monopterus_albus
ENSPLAG00000002600	RAB29	90	68.063	ENSNBRG00000008714	RAB29	80	68.063	Neolamprologus_brichardi
ENSPLAG00000002600	RAB29	95	69.608	ENSONIG00000014892	RAB29	99	69.608	Oreochromis_niloticus
ENSPLAG00000002600	RAB29	95	66.010	ENSORLG00000027892	RAB29	99	66.010	Oryzias_latipes
ENSPLAG00000002600	RAB29	95	64.532	ENSORLG00020005240	RAB29	99	64.532	Oryzias_latipes_hni
ENSPLAG00000002600	RAB29	95	65.025	ENSORLG00015020441	-	99	65.025	Oryzias_latipes_hsok
ENSPLAG00000002600	RAB29	95	66.502	ENSOMEG00000000336	RAB29	99	66.502	Oryzias_melastigma
ENSPLAG00000002600	RAB29	97	63.107	ENSPMGG00000008290	-	100	63.107	Periophthalmus_magnuspinnatus
ENSPLAG00000002600	RAB29	97	95.146	ENSPFOG00000013066	RAB29	99	95.146	Poecilia_formosa
ENSPLAG00000002600	RAB29	97	93.204	ENSPMEG00000021807	RAB29	100	93.204	Poecilia_mexicana
ENSPLAG00000002600	RAB29	97	87.864	ENSPREG00000020276	RAB29	100	87.864	Poecilia_reticulata
ENSPLAG00000002600	RAB29	95	69.118	ENSPNYG00000015355	RAB29	99	69.118	Pundamilia_nyererei
ENSPLAG00000002600	RAB29	95	66.176	ENSSDUG00000006543	RAB29	98	66.176	Seriola_dumerili
ENSPLAG00000002600	RAB29	80	56.471	ENSSPUG00000015007	RAB29	83	56.471	Sphenodon_punctatus
ENSPLAG00000002600	RAB29	95	69.458	ENSSPAG00000002062	RAB29	99	69.458	Stegastes_partitus
ENSPLAG00000002600	RAB29	97	82.524	ENSXCOG00000016370	RAB29	100	82.524	Xiphophorus_couchianus
ENSPLAG00000002600	RAB29	97	83.495	ENSXMAG00000029823	RAB29	100	83.495	Xiphophorus_maculatus