EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000002692 (Gene tree)
Gene ID: 106940417
Gene Symbol: -
Alias: -
Full Name: tRNA pseudouridine synthase A%2C mitochondrial-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 2823 bases
Position: chrKQ548485.1:5903-8725
Accession: 106940417
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000001604	PseudoU_synth_1	PF01416.20	3.5e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000014459	-	1709	XM_015023160	ENSPLAP00000001604	417 (aa)	XP_014878646	UPI00072E7E9F

Gene Model

Click here to download ENSPLAG00000002692's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000002692's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000002692	-	100	100.000	ENSPLAG00000007185	pus1	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000002692	-	89	66.667	ENSG00000177192	PUS1	91	69.231	Homo_sapiens
ENSPLAG00000002692	-	100	83.610	ENSAPOG00000007254	pus1	100	83.610	Acanthochromis_polyacanthus
ENSPLAG00000002692	-	90	65.867	ENSAMEG00000013715	PUS1	90	65.867	Ailuropoda_melanoleuca
ENSPLAG00000002692	-	100	78.759	ENSACIG00000009169	pus1	100	78.759	Amphilophus_citrinellus
ENSPLAG00000002692	-	100	84.798	ENSAOCG00000022207	pus1	100	84.798	Amphiprion_ocellaris
ENSPLAG00000002692	-	100	84.561	ENSAPEG00000006039	pus1	99	85.678	Amphiprion_percula
ENSPLAG00000002692	-	93	83.376	ENSATEG00000020688	pus1	100	83.376	Anabas_testudineus
ENSPLAG00000002692	-	82	71.637	ENSACAG00000007367	PUS1	91	71.637	Anolis_carolinensis
ENSPLAG00000002692	-	72	72.517	ENSANAG00000036192	PUS1	92	72.517	Aotus_nancymaae
ENSPLAG00000002692	-	100	83.135	ENSACLG00000020868	pus1	100	84.399	Astatotilapia_calliptera
ENSPLAG00000002692	-	99	69.194	ENSAMXG00000008710	pus1	97	69.194	Astyanax_mexicanus
ENSPLAG00000002692	-	91	64.116	ENSBTAG00000012990	PUS1	94	64.116	Bos_taurus
ENSPLAG00000002692	-	82	38.547	WBGene00004248	pus-1	85	38.547	Caenorhabditis_elegans
ENSPLAG00000002692	-	61	68.504	ENSCJAG00000003720	PUS1	70	68.482	Callithrix_jacchus
ENSPLAG00000002692	-	88	66.486	ENSCAFG00000006429	PUS1	87	69.628	Canis_familiaris
ENSPLAG00000002692	-	83	69.628	ENSCAFG00020010737	PUS1	81	69.628	Canis_lupus_dingo
ENSPLAG00000002692	-	90	65.160	ENSCHIG00000000487	PUS1	93	65.160	Capra_hircus
ENSPLAG00000002692	-	82	70.468	ENSTSYG00000032605	PUS1	99	67.935	Carlito_syrichta
ENSPLAG00000002692	-	72	71.572	ENSCAPG00000006421	PUS1	96	69.775	Cavia_aperea
ENSPLAG00000002692	-	82	68.713	ENSCPOG00000001027	PUS1	81	68.497	Cavia_porcellus
ENSPLAG00000002692	-	84	66.852	ENSCCAG00000015879	PUS1	84	71.711	Cebus_capucinus
ENSPLAG00000002692	-	83	69.075	ENSCATG00000032870	PUS1	83	72.039	Cercocebus_atys
ENSPLAG00000002692	-	82	68.421	ENSCLAG00000011689	PUS1	87	64.865	Chinchilla_lanigera
ENSPLAG00000002692	-	89	65.957	ENSCSAG00000001879	PUS1	87	65.957	Chlorocebus_sabaeus
ENSPLAG00000002692	-	75	71.338	ENSCPBG00000024715	PUS1	92	69.444	Chrysemys_picta_bellii
ENSPLAG00000002692	-	78	46.177	ENSCING00000009426	-	87	46.177	Ciona_intestinalis
ENSPLAG00000002692	-	76	44.828	ENSCSAVG00000003751	-	66	44.828	Ciona_savignyi
ENSPLAG00000002692	-	88	59.946	ENSCANG00000035561	PUS1	89	62.614	Colobus_angolensis_palliatus
ENSPLAG00000002692	-	86	67.500	ENSCGRG00001019592	Pus1	85	67.500	Cricetulus_griseus_chok1gshd
ENSPLAG00000002692	-	86	67.500	ENSCGRG00000004048	Pus1	87	69.883	Cricetulus_griseus_crigri
ENSPLAG00000002692	-	100	74.347	ENSCSEG00000003629	pus1	100	74.347	Cynoglossus_semilaevis
ENSPLAG00000002692	-	100	87.050	ENSCVAG00000001265	pus1	100	87.050	Cyprinodon_variegatus
ENSPLAG00000002692	-	92	67.277	ENSDARG00000045562	pus1	97	75.000	Danio_rerio
ENSPLAG00000002692	-	83	66.859	ENSDNOG00000045576	PUS1	99	66.871	Dasypus_novemcinctus
ENSPLAG00000002692	-	78	68.519	ENSDORG00000011455	Pus1	99	68.519	Dipodomys_ordii
ENSPLAG00000002692	-	82	47.143	FBgn0038811	PUS1	84	47.143	Drosophila_melanogaster
ENSPLAG00000002692	-	82	69.591	ENSETEG00000019160	PUS1	84	69.679	Echinops_telfairi
ENSPLAG00000002692	-	82	44.628	ENSEBUG00000000368	-	68	44.536	Eptatretus_burgeri
ENSPLAG00000002692	-	83	68.876	ENSEASG00005016535	PUS1	80	68.876	Equus_asinus_asinus
ENSPLAG00000002692	-	83	69.075	ENSECAG00000006965	PUS1	87	68.876	Equus_caballus
ENSPLAG00000002692	-	93	74.936	ENSELUG00000010424	pus1	99	74.936	Esox_lucius
ENSPLAG00000002692	-	83	68.497	ENSFCAG00000010780	PUS1	81	68.497	Felis_catus
ENSPLAG00000002692	-	94	63.457	ENSFALG00000008273	PUS1	95	63.457	Ficedula_albicollis
ENSPLAG00000002692	-	84	68.169	ENSFDAG00000012518	PUS1	88	67.218	Fukomys_damarensis
ENSPLAG00000002692	-	100	88.995	ENSFHEG00000010504	pus1	100	88.995	Fundulus_heteroclitus
ENSPLAG00000002692	-	94	74.425	ENSGMOG00000008143	pus1	99	74.425	Gadus_morhua
ENSPLAG00000002692	-	90	66.841	ENSGALG00000002354	PUS1	93	66.841	Gallus_gallus
ENSPLAG00000002692	-	100	95.923	ENSGAFG00000006578	pus1	100	95.923	Gambusia_affinis
ENSPLAG00000002692	-	100	81.710	ENSGACG00000017566	pus1	99	83.376	Gasterosteus_aculeatus
ENSPLAG00000002692	-	79	68.085	ENSGAGG00000016730	-	94	68.085	Gopherus_agassizii
ENSPLAG00000002692	-	92	65.365	ENSGGOG00000009178	PUS1	87	69.018	Gorilla_gorilla
ENSPLAG00000002692	-	100	83.610	ENSHBUG00000001316	pus1	100	84.910	Haplochromis_burtoni
ENSPLAG00000002692	-	68	30.284	ENSHGLG00000015753	-	80	30.284	Heterocephalus_glaber_female
ENSPLAG00000002692	-	88	63.836	ENSHGLG00000016086	PUS1	93	63.836	Heterocephalus_glaber_female
ENSPLAG00000002692	-	88	63.562	ENSHGLG00100019362	PUS1	93	63.562	Heterocephalus_glaber_male
ENSPLAG00000002692	-	100	74.940	ENSHCOG00000014288	pus1	96	74.940	Hippocampus_comes
ENSPLAG00000002692	-	93	74.677	ENSIPUG00000010387	pus1	91	77.534	Ictalurus_punctatus
ENSPLAG00000002692	-	84	67.324	ENSSTOG00000011245	PUS1	86	65.676	Ictidomys_tridecemlineatus
ENSPLAG00000002692	-	61	30.314	ENSSTOG00000003721	PUS3	54	30.314	Ictidomys_tridecemlineatus
ENSPLAG00000002692	-	81	69.912	ENSJJAG00000000088	Pus1	80	69.912	Jaculus_jaculus
ENSPLAG00000002692	-	100	77.857	ENSKMAG00000012702	pus1	100	77.857	Kryptolebias_marmoratus
ENSPLAG00000002692	-	95	81.658	ENSLBEG00000002845	pus1	98	81.658	Labrus_bergylta
ENSPLAG00000002692	-	78	57.407	ENSLACG00000016044	-	98	57.407	Latimeria_chalumnae
ENSPLAG00000002692	-	86	68.232	ENSLACG00000018598	PUS1	94	66.491	Latimeria_chalumnae
ENSPLAG00000002692	-	91	68.571	ENSLOCG00000006127	pus1	97	68.571	Lepisosteus_oculatus
ENSPLAG00000002692	-	88	66.033	ENSLAFG00000028731	PUS1	99	66.033	Loxodonta_africana
ENSPLAG00000002692	-	84	69.628	ENSMFAG00000041194	PUS1	83	72.368	Macaca_fascicularis
ENSPLAG00000002692	-	83	69.364	ENSMMUG00000031463	PUS1	87	72.368	Macaca_mulatta
ENSPLAG00000002692	-	83	69.364	ENSMNEG00000002814	PUS1	83	72.368	Macaca_nemestrina
ENSPLAG00000002692	-	73	72.368	ENSMLEG00000043560	PUS1	92	72.517	Mandrillus_leucophaeus
ENSPLAG00000002692	-	100	81.948	ENSMAMG00000007371	pus1	100	81.948	Mastacembelus_armatus
ENSPLAG00000002692	-	100	83.135	ENSMZEG00005017746	pus1	100	83.135	Maylandia_zebra
ENSPLAG00000002692	-	78	71.166	ENSMGAG00000001958	PUS1	99	71.166	Meleagris_gallopavo
ENSPLAG00000002692	-	84	69.914	ENSMAUG00000001482	Pus1	82	69.914	Mesocricetus_auratus
ENSPLAG00000002692	-	88	67.120	ENSMICG00000030980	PUS1	90	67.120	Microcebus_murinus
ENSPLAG00000002692	-	89	66.310	ENSMOCG00000022311	Pus1	88	66.310	Microtus_ochrogaster
ENSPLAG00000002692	-	93	77.892	ENSMMOG00000021022	pus1	99	77.892	Mola_mola
ENSPLAG00000002692	-	82	69.275	ENSMODG00000015551	PUS1	82	67.120	Monodelphis_domestica
ENSPLAG00000002692	-	99	80.238	ENSMALG00000013202	pus1	99	80.238	Monopterus_albus
ENSPLAG00000002692	-	88	67.575	MGP_CAROLIEiJ_G0027551	Pus1	93	67.575	Mus_caroli
ENSPLAG00000002692	-	88	67.575	ENSMUSG00000029507	Pus1	93	67.575	Mus_musculus
ENSPLAG00000002692	-	87	68.132	MGP_PahariEiJ_G0024133	Pus1	92	68.132	Mus_pahari
ENSPLAG00000002692	-	88	67.575	MGP_SPRETEiJ_G0028549	Pus1	93	67.575	Mus_spretus
ENSPLAG00000002692	-	84	68.768	ENSMPUG00000002314	PUS1	88	68.768	Mustela_putorius_furo
ENSPLAG00000002692	-	87	65.289	ENSMLUG00000015790	PUS1	99	65.289	Myotis_lucifugus
ENSPLAG00000002692	-	86	68.333	ENSNGAG00000012976	Pus1	85	68.333	Nannospalax_galili
ENSPLAG00000002692	-	61	30.314	ENSNGAG00000013868	Pus3	54	30.314	Nannospalax_galili
ENSPLAG00000002692	-	93	85.166	ENSNBRG00000020502	pus1	99	86.364	Neolamprologus_brichardi
ENSPLAG00000002692	-	83	67.826	ENSNLEG00000008505	PUS1	92	72.696	Nomascus_leucogenys
ENSPLAG00000002692	-	82	62.791	ENSMEUG00000002825	PUS1	92	62.791	Notamacropus_eugenii
ENSPLAG00000002692	-	83	59.942	ENSOPRG00000002701	-	91	59.942	Ochotona_princeps
ENSPLAG00000002692	-	88	66.304	ENSODEG00000008248	PUS1	91	68.786	Octodon_degus
ENSPLAG00000002692	-	94	83.627	ENSONIG00000003803	pus1	100	83.627	Oreochromis_niloticus
ENSPLAG00000002692	-	79	30.411	ENSOANG00000000406	PUS3	69	30.411	Ornithorhynchus_anatinus
ENSPLAG00000002692	-	83	68.376	ENSOANG00000010619	PUS1	93	62.162	Ornithorhynchus_anatinus
ENSPLAG00000002692	-	86	67.688	ENSOCUG00000007310	PUS1	78	67.218	Oryctolagus_cuniculus
ENSPLAG00000002692	-	100	79.524	ENSORLG00000010787	pus1	100	79.524	Oryzias_latipes
ENSPLAG00000002692	-	100	79.762	ENSORLG00020011483	pus1	100	79.762	Oryzias_latipes_hni
ENSPLAG00000002692	-	100	79.762	ENSORLG00015023012	pus1	99	82.474	Oryzias_latipes_hsok
ENSPLAG00000002692	-	98	79.218	ENSOMEG00000022655	pus1	96	79.218	Oryzias_melastigma
ENSPLAG00000002692	-	88	66.576	ENSOGAG00000008720	PUS1	95	67.391	Otolemur_garnettii
ENSPLAG00000002692	-	91	64.380	ENSOARG00000013316	PUS1	87	64.380	Ovis_aries
ENSPLAG00000002692	-	89	66.935	ENSPPAG00000040971	PUS1	87	69.325	Pan_paniscus
ENSPLAG00000002692	-	83	68.497	ENSPPRG00000015456	PUS1	87	68.497	Panthera_pardus
ENSPLAG00000002692	-	82	68.513	ENSPTIG00000004201	PUS1	89	68.696	Panthera_tigris_altaica
ENSPLAG00000002692	-	89	66.935	ENSPTRG00000005643	PUS1	87	69.325	Pan_troglodytes
ENSPLAG00000002692	-	83	69.364	ENSPANG00000000376	PUS1	83	72.368	Papio_anubis
ENSPLAG00000002692	-	95	64.878	ENSPKIG00000019369	pus1	93	64.634	Paramormyrops_kingsleyae
ENSPLAG00000002692	-	98	62.927	ENSPSIG00000016432	PUS1	96	62.864	Pelodiscus_sinensis
ENSPLAG00000002692	-	88	79.837	ENSPMGG00000004522	pus1	95	79.837	Periophthalmus_magnuspinnatus
ENSPLAG00000002692	-	86	68.333	ENSPEMG00000013448	Pus1	85	68.333	Peromyscus_maniculatus_bairdii
ENSPLAG00000002692	-	79	60.790	ENSPMAG00000004636	pus1	99	60.790	Petromyzon_marinus
ENSPLAG00000002692	-	73	61.386	ENSPCIG00000022609	-	75	59.248	Phascolarctos_cinereus
ENSPLAG00000002692	-	100	99.760	ENSPFOG00000019669	pus1	100	99.760	Poecilia_formosa
ENSPLAG00000002692	-	100	99.520	ENSPMEG00000011115	PUS1	100	99.520	Poecilia_mexicana
ENSPLAG00000002692	-	98	99.509	ENSPMEG00000006038	pus1	99	99.509	Poecilia_mexicana
ENSPLAG00000002692	-	95	97.727	ENSPREG00000007231	pus1	99	97.772	Poecilia_reticulata
ENSPLAG00000002692	-	89	66.398	ENSPPYG00000005132	PUS1	87	66.398	Pongo_abelii
ENSPLAG00000002692	-	64	67.293	ENSPCAG00000009110	-	65	67.293	Procavia_capensis
ENSPLAG00000002692	-	83	61.739	ENSPCOG00000015595	PUS1	90	60.490	Propithecus_coquereli
ENSPLAG00000002692	-	100	83.135	ENSPNYG00000013571	pus1	100	83.135	Pundamilia_nyererei
ENSPLAG00000002692	-	99	69.471	ENSPNAG00000003938	pus1	96	69.471	Pygocentrus_nattereri
ENSPLAG00000002692	-	88	67.030	ENSRNOG00000037500	Pus1	86	67.030	Rattus_norvegicus
ENSPLAG00000002692	-	85	67.218	ENSRBIG00000043177	PUS1	91	67.218	Rhinopithecus_bieti
ENSPLAG00000002692	-	85	67.218	ENSRROG00000039744	PUS1	82	72.500	Rhinopithecus_roxellana
ENSPLAG00000002692	-	79	43.836	YPL212C	-	63	41.358	Saccharomyces_cerevisiae
ENSPLAG00000002692	-	89	64.675	ENSSBOG00000023593	PUS1	93	68.827	Saimiri_boliviensis_boliviensis
ENSPLAG00000002692	-	87	67.582	ENSSHAG00000013193	PUS1	86	67.582	Sarcophilus_harrisii
ENSPLAG00000002692	-	93	68.010	ENSSFOG00015003463	pus1	93	66.993	Scleropages_formosus
ENSPLAG00000002692	-	100	80.048	ENSSMAG00000019075	pus1	100	80.048	Scophthalmus_maximus
ENSPLAG00000002692	-	100	81.473	ENSSDUG00000007102	pus1	100	81.473	Seriola_dumerili
ENSPLAG00000002692	-	100	80.998	ENSSLDG00000022850	pus1	100	80.998	Seriola_lalandi_dorsalis
ENSPLAG00000002692	-	72	62.914	ENSSARG00000008367	PUS1	97	62.914	Sorex_araneus
ENSPLAG00000002692	-	87	68.871	ENSSPUG00000010009	PUS1	91	68.871	Sphenodon_punctatus
ENSPLAG00000002692	-	93	82.353	ENSSPAG00000006272	pus1	99	82.353	Stegastes_partitus
ENSPLAG00000002692	-	88	66.485	ENSSSCG00000009741	PUS1	91	66.485	Sus_scrofa
ENSPLAG00000002692	-	79	72.121	ENSTGUG00000008068	PUS1	99	72.121	Taeniopygia_guttata
ENSPLAG00000002692	-	86	78.947	ENSTRUG00000002198	pus1	91	79.155	Takifugu_rubripes
ENSPLAG00000002692	-	93	72.634	ENSTNIG00000003942	pus1	98	73.146	Tetraodon_nigroviridis
ENSPLAG00000002692	-	91	63.588	ENSTTRG00000000632	PUS1	89	63.588	Tursiops_truncatus
ENSPLAG00000002692	-	84	68.768	ENSUAMG00000017197	PUS1	88	68.768	Ursus_americanus
ENSPLAG00000002692	-	84	68.768	ENSUMAG00000002831	PUS1	95	72.013	Ursus_maritimus
ENSPLAG00000002692	-	83	69.741	ENSVVUG00000004199	PUS1	79	69.942	Vulpes_vulpes
ENSPLAG00000002692	-	77	48.308	ENSXETG00000033640	-	100	48.308	Xenopus_tropicalis
ENSPLAG00000002692	-	91	65.789	ENSXETG00000002030	pus1	94	65.789	Xenopus_tropicalis
ENSPLAG00000002692	-	95	96.717	ENSXCOG00000004722	pus1	98	96.717	Xiphophorus_couchianus
ENSPLAG00000002692	-	100	96.163	ENSXMAG00000000988	pus1	100	96.163	Xiphophorus_maculatus