EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000002827 (Gene tree)
Gene ID: -
Gene Symbol: ppargc1a
Alias: -
Full Name: PPARG coactivator 1 alpha
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 43693 bases
Position: chrKQ545512.1:574808-618500
Accession: 106946582
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000001710	RRM_1	PF00076.22	8.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000014278	-	2346	XM_015031005	ENSPLAP00000001710	781 (aa)	XP_014886491	-

Gene Model

Click here to download ENSPLAG00000002827's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000002827's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000002827	ppargc1a	99	96.311	ENSAPOG00000018632	ppargc1a	100	79.604	Acanthochromis_polyacanthus
ENSPLAG00000002827	ppargc1a	100	73.640	ENSACIG00000009732	ppargc1a	100	74.419	Amphilophus_citrinellus
ENSPLAG00000002827	ppargc1a	99	96.311	ENSAOCG00000006754	ppargc1a	100	80.075	Amphiprion_ocellaris
ENSPLAG00000002827	ppargc1a	100	79.146	ENSAPEG00000022574	ppargc1a	100	79.222	Amphiprion_percula
ENSPLAG00000002827	ppargc1a	95	95.082	ENSATEG00000016702	ppargc1a	100	77.122	Anabas_testudineus
ENSPLAG00000002827	ppargc1a	93	94.760	ENSACLG00000001002	ppargc1a	100	78.003	Astatotilapia_calliptera
ENSPLAG00000002827	ppargc1a	57	96.053	ENSAMXG00000002461	ppargc1a	50	66.307	Astyanax_mexicanus
ENSPLAG00000002827	ppargc1a	71	50.493	ENSCLAG00000002058	PPARGC1A	67	49.308	Chinchilla_lanigera
ENSPLAG00000002827	ppargc1a	71	50.825	ENSCGRG00001015534	Ppargc1a	67	49.481	Cricetulus_griseus_chok1gshd
ENSPLAG00000002827	ppargc1a	71	50.825	ENSCGRG00000000200	Ppargc1a	67	49.481	Cricetulus_griseus_crigri
ENSPLAG00000002827	ppargc1a	95	95.082	ENSCSEG00000006884	ppargc1a	100	74.969	Cynoglossus_semilaevis
ENSPLAG00000002827	ppargc1a	99	81.557	ENSCVAG00000016547	ppargc1a	100	66.993	Cyprinodon_variegatus
ENSPLAG00000002827	ppargc1a	72	86.747	ENSDARG00000067829	ppargc1a	68	86.747	Danio_rerio
ENSPLAG00000002827	ppargc1a	100	52.074	ENSDNOG00000041106	PPARGC1A	67	49.310	Dasypus_novemcinctus
ENSPLAG00000002827	ppargc1a	71	49.836	ENSECAG00000009164	PPARGC1A	64	48.448	Equus_caballus
ENSPLAG00000002827	ppargc1a	96	73.502	ENSELUG00000017027	ppargc1a	69	89.759	Esox_lucius
ENSPLAG00000002827	ppargc1a	71	50.164	ENSFDAG00000005659	PPARGC1A	67	48.966	Fukomys_damarensis
ENSPLAG00000002827	ppargc1a	98	98.340	ENSFHEG00000021990	ppargc1a	100	86.768	Fundulus_heteroclitus
ENSPLAG00000002827	ppargc1a	98	98.340	ENSGAFG00000015514	ppargc1a	100	88.579	Gambusia_affinis
ENSPLAG00000002827	ppargc1a	100	79.172	ENSHBUG00000005269	ppargc1a	100	78.868	Haplochromis_burtoni
ENSPLAG00000002827	ppargc1a	71	49.836	ENSHGLG00100000133	PPARGC1A	67	48.621	Heterocephalus_glaber_male
ENSPLAG00000002827	ppargc1a	97	91.803	ENSHCOG00000014886	ppargc1a	81	91.803	Hippocampus_comes
ENSPLAG00000002827	ppargc1a	99	95.082	ENSKMAG00000005390	ppargc1a	100	80.451	Kryptolebias_marmoratus
ENSPLAG00000002827	ppargc1a	95	95.436	ENSLBEG00000019562	ppargc1a	91	87.961	Labrus_bergylta
ENSPLAG00000002827	ppargc1a	89	84.337	ENSLACG00000014054	PPARGC1A	88	84.337	Latimeria_chalumnae
ENSPLAG00000002827	ppargc1a	89	91.566	ENSLOCG00000012350	ppargc1a	87	91.566	Lepisosteus_oculatus
ENSPLAG00000002827	ppargc1a	94	95.902	ENSMAMG00000005531	ppargc1a	80	95.902	Mastacembelus_armatus
ENSPLAG00000002827	ppargc1a	95	95.082	ENSMZEG00005001739	ppargc1a	59	95.082	Maylandia_zebra
ENSPLAG00000002827	ppargc1a	71	49.331	ENSMGAG00000012485	PPARGC1A	68	47.368	Meleagris_gallopavo
ENSPLAG00000002827	ppargc1a	71	50.660	ENSMAUG00000011811	Ppargc1a	67	49.654	Mesocricetus_auratus
ENSPLAG00000002827	ppargc1a	99	93.852	ENSMMOG00000011847	ppargc1a	81	93.852	Mola_mola
ENSPLAG00000002827	ppargc1a	71	50.165	ENSMODG00000000549	PPARGC1A	67	49.057	Monodelphis_domestica
ENSPLAG00000002827	ppargc1a	95	93.852	ENSMALG00000004625	ppargc1a	75	93.852	Monopterus_albus
ENSPLAG00000002827	ppargc1a	71	50.000	MGP_CAROLIEiJ_G0027213	Ppargc1a	67	48.789	Mus_caroli
ENSPLAG00000002827	ppargc1a	71	50.495	ENSMUSG00000029167	Ppargc1a	67	49.135	Mus_musculus
ENSPLAG00000002827	ppargc1a	71	50.000	MGP_PahariEiJ_G0016995	Ppargc1a	67	48.616	Mus_pahari
ENSPLAG00000002827	ppargc1a	71	50.083	MGP_SPRETEiJ_G0028208	Ppargc1a	67	49.047	Mus_spretus
ENSPLAG00000002827	ppargc1a	71	49.836	ENSMLUG00000016307	PPARGC1A	67	49.138	Myotis_lucifugus
ENSPLAG00000002827	ppargc1a	100	79.445	ENSNBRG00000023403	ppargc1a	100	78.508	Neolamprologus_brichardi
ENSPLAG00000002827	ppargc1a	71	49.836	ENSOPRG00000012899	PPARGC1A	67	49.138	Ochotona_princeps
ENSPLAG00000002827	ppargc1a	100	69.402	ENSONIG00000007635	ppargc1a	100	69.519	Oreochromis_niloticus
ENSPLAG00000002827	ppargc1a	92	80.000	ENSOANG00000006680	PPARGC1A	88	80.120	Ornithorhynchus_anatinus
ENSPLAG00000002827	ppargc1a	95	95.492	ENSORLG00000004788	ppargc1a	100	79.061	Oryzias_latipes
ENSPLAG00000002827	ppargc1a	95	95.492	ENSORLG00020014690	ppargc1a	100	76.277	Oryzias_latipes_hni
ENSPLAG00000002827	ppargc1a	95	95.082	ENSORLG00015012206	ppargc1a	86	97.368	Oryzias_latipes_hsok
ENSPLAG00000002827	ppargc1a	94	95.082	ENSOMEG00000000670	ppargc1a	100	77.819	Oryzias_melastigma
ENSPLAG00000002827	ppargc1a	96	72.627	ENSPMGG00000019204	ppargc1a	90	72.627	Periophthalmus_magnuspinnatus
ENSPLAG00000002827	ppargc1a	71	50.660	ENSPEMG00000010892	Ppargc1a	67	49.135	Peromyscus_maniculatus_bairdii
ENSPLAG00000002827	ppargc1a	98	100.000	ENSPFOG00000001263	ppargc1a	100	78.518	Poecilia_formosa
ENSPLAG00000002827	ppargc1a	98	99.583	ENSPMEG00000000720	ppargc1a	92	99.590	Poecilia_mexicana
ENSPLAG00000002827	ppargc1a	98	100.000	ENSPREG00000019171	ppargc1a	100	89.926	Poecilia_reticulata
ENSPLAG00000002827	ppargc1a	71	49.671	ENSPCAG00000016308	PPARGC1A	67	48.448	Procavia_capensis
ENSPLAG00000002827	ppargc1a	71	50.164	ENSPVAG00000004965	PPARGC1A	67	49.138	Pteropus_vampyrus
ENSPLAG00000002827	ppargc1a	95	95.492	ENSPNYG00000006846	ppargc1a	100	78.348	Pundamilia_nyererei
ENSPLAG00000002827	ppargc1a	97	87.234	ENSPNAG00000010393	ppargc1a	69	87.952	Pygocentrus_nattereri
ENSPLAG00000002827	ppargc1a	71	50.165	ENSRNOG00000004473	Ppargc1a	67	48.962	Rattus_norvegicus
ENSPLAG00000002827	ppargc1a	100	49.943	ENSSFOG00015018522	ppargc1a	51	59.368	Scleropages_formosus
ENSPLAG00000002827	ppargc1a	95	93.852	ENSSMAG00000011571	ppargc1a	100	73.621	Scophthalmus_maximus
ENSPLAG00000002827	ppargc1a	100	74.691	ENSSDUG00000007408	ppargc1a	100	73.929	Seriola_dumerili
ENSPLAG00000002827	ppargc1a	97	95.902	ENSSLDG00000006987	ppargc1a	89	79.039	Seriola_lalandi_dorsalis
ENSPLAG00000002827	ppargc1a	87	76.800	ENSSARG00000000575	PPARGC1A	83	76.800	Sorex_araneus
ENSPLAG00000002827	ppargc1a	92	81.098	ENSSPUG00000013556	PPARGC1A	70	81.325	Sphenodon_punctatus
ENSPLAG00000002827	ppargc1a	97	96.070	ENSSPAG00000023514	ppargc1a	100	80.556	Stegastes_partitus
ENSPLAG00000002827	ppargc1a	71	50.493	ENSSSCG00000029275	PPARGC1A	67	50.000	Sus_scrofa
ENSPLAG00000002827	ppargc1a	85	90.533	ENSTRUG00000007210	ppargc1a	82	73.926	Takifugu_rubripes
ENSPLAG00000002827	ppargc1a	100	50.775	ENSXETG00000020468	ppargc1a	59	51.411	Xenopus_tropicalis
ENSPLAG00000002827	ppargc1a	98	99.585	ENSXCOG00000004835	ppargc1a	100	80.825	Xiphophorus_couchianus
ENSPLAG00000002827	ppargc1a	98	99.167	ENSXMAG00000007748	ppargc1a	69	99.180	Xiphophorus_maculatus