EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000002862 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 23342 bases
Position: chrKQ547796.1:3222-26563
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000001744	RRM_1	PF00076.22	4.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000014219	-	483	-	ENSPLAP00000001744	160 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000002862's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000002862's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000002862	-	58	36.170	ENSPLAG00000001547	elavl3	66	36.170
ENSPLAG00000002862	-	59	33.784	ENSPLAG00000020810	ELAVL1	71	33.784
ENSPLAG00000002862	-	72	34.146	ENSPLAG00000008085	elavl4	61	36.170
ENSPLAG00000002862	-	58	37.234	ENSPLAG00000005203	ELAVL2	63	37.234
ENSPLAG00000002862	-	52	93.976	ENSPLAG00000005161	-	59	85.149

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000002862	-	50	97.500	ENSCAFG00020024980	RBMS3	69	82.524	Canis_lupus_dingo
ENSPLAG00000002862	-	73	75.214	ENSCVAG00000022814	-	58	84.848	Cyprinodon_variegatus
ENSPLAG00000002862	-	60	84.375	ENSDARG00000044574	rbms3	78	75.214	Danio_rerio
ENSPLAG00000002862	-	52	93.976	ENSFHEG00000016746	-	71	85.149	Fundulus_heteroclitus
ENSPLAG00000002862	-	60	81.250	MGP_CAROLIEiJ_G0032783	Rbms3	54	72.650	Mus_caroli
ENSPLAG00000002862	-	60	82.292	ENSMUSG00000039607	Rbms3	54	73.504	Mus_musculus
ENSPLAG00000002862	-	60	82.292	MGP_PahariEiJ_G0015650	Rbms3	54	73.504	Mus_pahari
ENSPLAG00000002862	-	60	82.292	MGP_SPRETEiJ_G0033930	Rbms3	54	73.504	Mus_spretus
ENSPLAG00000002862	-	73	97.436	ENSPMEG00000013853	-	95	97.436	Poecilia_mexicana
ENSPLAG00000002862	-	73	74.359	ENSPNAG00000026763	-	50	74.359	Pygocentrus_nattereri
ENSPLAG00000002862	-	60	82.292	ENSVVUG00000004660	RBMS3	53	73.504	Vulpes_vulpes