EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000002871 (Gene tree)
Gene ID: 106955205
Gene Symbol: LARP4B
Alias: -
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 36941 bases
Position: chrKQ546030.1:56742-93682
Accession: 106955205
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000001735	La	PF05383.17	1.2e-13	1	1
ENSPLAP00000020162	La	PF05383.17	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000014235	LARP4B-202	2097	-	ENSPLAP00000001735	698 (aa)	-	-
ENSPLAT00000014226	LARP4B-201	6620	XM_015045243	ENSPLAP00000020162	770 (aa)	XP_014900729	UPI00072EB2B5

Gene Model

Click here to download ENSPLAG00000002871's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000002871's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000002871	LARP4B	73	40.201	ENSPLAG00000013626	larp4aa	63	42.884
ENSPLAG00000002871	LARP4B	85	37.032	ENSPLAG00000008502	larp4ab	72	39.367

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000002871	LARP4B	100	55.990	ENSG00000107929	LARP4B	100	55.729	Homo_sapiens
ENSPLAG00000002871	LARP4B	100	77.731	ENSAPOG00000020531	LARP4B	95	85.900	Acanthochromis_polyacanthus
ENSPLAG00000002871	LARP4B	91	56.553	ENSAMEG00000001810	LARP4B	100	54.628	Ailuropoda_melanoleuca
ENSPLAG00000002871	LARP4B	98	73.796	ENSAOCG00000007887	-	99	78.768	Amphiprion_ocellaris
ENSPLAG00000002871	LARP4B	94	83.541	ENSAPEG00000002512	LARP4B	96	81.660	Amphiprion_percula
ENSPLAG00000002871	LARP4B	100	81.888	ENSATEG00000012614	LARP4B	100	81.888	Anabas_testudineus
ENSPLAG00000002871	LARP4B	100	58.505	ENSAPLG00000003813	LARP4B	98	58.763	Anas_platyrhynchos
ENSPLAG00000002871	LARP4B	100	59.311	ENSACAG00000002858	LARP4B	100	58.808	Anolis_carolinensis
ENSPLAG00000002871	LARP4B	100	55.404	ENSANAG00000007531	-	100	55.007	Aotus_nancymaae
ENSPLAG00000002871	LARP4B	100	82.864	ENSACLG00000026356	LARP4B	100	83.780	Astatotilapia_calliptera
ENSPLAG00000002871	LARP4B	94	52.270	ENSAMXG00000003335	larp4b	96	51.802	Astyanax_mexicanus
ENSPLAG00000002871	LARP4B	100	57.220	ENSBTAG00000013899	LARP4B	100	56.005	Bos_taurus
ENSPLAG00000002871	LARP4B	100	55.417	ENSCJAG00000018434	LARP4B	100	54.759	Callithrix_jacchus
ENSPLAG00000002871	LARP4B	88	63.658	ENSCAFG00020004209	LARP4B	100	63.658	Canis_lupus_dingo
ENSPLAG00000002871	LARP4B	97	55.855	ENSCHIG00000013543	LARP4B	98	55.121	Capra_hircus
ENSPLAG00000002871	LARP4B	86	61.353	ENSTSYG00000002568	LARP4B	99	60.386	Carlito_syrichta
ENSPLAG00000002871	LARP4B	90	54.490	ENSCAPG00000009725	LARP4B	76	68.137	Cavia_aperea
ENSPLAG00000002871	LARP4B	100	55.744	ENSCPOG00000009375	LARP4B	100	55.352	Cavia_porcellus
ENSPLAG00000002871	LARP4B	100	55.195	ENSCCAG00000024869	LARP4B	100	54.876	Cebus_capucinus
ENSPLAG00000002871	LARP4B	100	56.047	ENSCATG00000019750	LARP4B	100	55.787	Cercocebus_atys
ENSPLAG00000002871	LARP4B	100	57.677	ENSCLAG00000011570	LARP4B	100	56.876	Chinchilla_lanigera
ENSPLAG00000002871	LARP4B	61	78.788	ENSCHOG00000007831	-	56	78.788	Choloepus_hoffmanni
ENSPLAG00000002871	LARP4B	100	60.053	ENSCPBG00000017063	LARP4B	100	59.788	Chrysemys_picta_bellii
ENSPLAG00000002871	LARP4B	100	54.096	ENSCANG00000038021	LARP4B	100	53.836	Colobus_angolensis_palliatus
ENSPLAG00000002871	LARP4B	100	54.805	ENSCGRG00001022930	Larp4b	100	60.000	Cricetulus_griseus_chok1gshd
ENSPLAG00000002871	LARP4B	100	54.805	ENSCGRG00000006022	Larp4b	100	60.000	Cricetulus_griseus_crigri
ENSPLAG00000002871	LARP4B	100	75.710	ENSCSEG00000007342	LARP4B	100	74.893	Cynoglossus_semilaevis
ENSPLAG00000002871	LARP4B	100	87.500	ENSCVAG00000008910	LARP4B	100	88.144	Cyprinodon_variegatus
ENSPLAG00000002871	LARP4B	95	53.086	ENSDARG00000062146	larp4b	99	52.610	Danio_rerio
ENSPLAG00000002871	LARP4B	96	56.250	ENSDNOG00000045543	-	100	62.055	Dasypus_novemcinctus
ENSPLAG00000002871	LARP4B	100	53.264	ENSDORG00000009328	Larp4b	100	58.549	Dipodomys_ordii
ENSPLAG00000002871	LARP4B	88	57.910	ENSETEG00000011249	LARP4B	89	57.584	Echinops_telfairi
ENSPLAG00000002871	LARP4B	91	57.000	ENSEASG00005019068	-	100	54.700	Equus_asinus_asinus
ENSPLAG00000002871	LARP4B	91	57.511	ENSECAG00000024040	LARP4B	100	54.902	Equus_caballus
ENSPLAG00000002871	LARP4B	92	55.915	ENSEEUG00000008391	LARP4B	98	53.377	Erinaceus_europaeus
ENSPLAG00000002871	LARP4B	87	44.212	ENSELUG00000001417	-	94	43.891	Esox_lucius
ENSPLAG00000002871	LARP4B	100	72.152	ENSELUG00000008626	LARP4B	100	72.152	Esox_lucius
ENSPLAG00000002871	LARP4B	98	54.809	ENSFCAG00000000721	-	100	55.267	Felis_catus
ENSPLAG00000002871	LARP4B	100	59.495	ENSFALG00000006961	LARP4B	100	60.080	Ficedula_albicollis
ENSPLAG00000002871	LARP4B	100	56.584	ENSFDAG00000006158	LARP4B	97	55.671	Fukomys_damarensis
ENSPLAG00000002871	LARP4B	100	75.923	ENSFHEG00000013037	LARP4B	100	76.060	Fundulus_heteroclitus
ENSPLAG00000002871	LARP4B	79	75.000	ENSGMOG00000010818	-	88	85.366	Gadus_morhua
ENSPLAG00000002871	LARP4B	100	59.894	ENSGALG00000006672	LARP4B	100	59.499	Gallus_gallus
ENSPLAG00000002871	LARP4B	100	73.833	ENSGACG00000017535	LARP4B	98	73.006	Gasterosteus_aculeatus
ENSPLAG00000002871	LARP4B	96	58.274	ENSGAGG00000008598	LARP4B	100	56.815	Gopherus_agassizii
ENSPLAG00000002871	LARP4B	100	55.859	ENSGGOG00000003572	LARP4B	100	55.599	Gorilla_gorilla
ENSPLAG00000002871	LARP4B	100	83.484	ENSHBUG00000007535	LARP4B	100	84.149	Haplochromis_burtoni
ENSPLAG00000002871	LARP4B	100	56.152	ENSHGLG00000012936	LARP4B	100	60.484	Heterocephalus_glaber_female
ENSPLAG00000002871	LARP4B	100	56.732	ENSHGLG00100016220	-	100	55.628	Heterocephalus_glaber_male
ENSPLAG00000002871	LARP4B	85	52.998	ENSHGLG00100017261	-	100	52.358	Heterocephalus_glaber_male
ENSPLAG00000002871	LARP4B	91	91.071	ENSHCOG00000011581	LARP4B	89	71.146	Hippocampus_comes
ENSPLAG00000002871	LARP4B	94	52.330	ENSIPUG00000009705	larp4b	98	52.247	Ictalurus_punctatus
ENSPLAG00000002871	LARP4B	100	57.483	ENSSTOG00000000587	LARP4B	100	57.523	Ictidomys_tridecemlineatus
ENSPLAG00000002871	LARP4B	100	56.186	ENSJJAG00000020847	Larp4b	100	55.917	Jaculus_jaculus
ENSPLAG00000002871	LARP4B	100	84.903	ENSKMAG00000021674	LARP4B	100	85.032	Kryptolebias_marmoratus
ENSPLAG00000002871	LARP4B	76	87.248	ENSLBEG00000025293	-	82	87.416	Labrus_bergylta
ENSPLAG00000002871	LARP4B	94	57.395	ENSLACG00000009492	LARP4B	100	57.201	Latimeria_chalumnae
ENSPLAG00000002871	LARP4B	100	63.694	ENSLOCG00000012290	larp4b	100	63.452	Lepisosteus_oculatus
ENSPLAG00000002871	LARP4B	100	55.901	ENSLAFG00000015334	LARP4B	100	55.642	Loxodonta_africana
ENSPLAG00000002871	LARP4B	100	56.047	ENSMFAG00000001766	LARP4B	100	53.836	Macaca_fascicularis
ENSPLAG00000002871	LARP4B	100	56.047	ENSMMUG00000005279	LARP4B	100	55.787	Macaca_mulatta
ENSPLAG00000002871	LARP4B	100	55.917	ENSMNEG00000014019	LARP4B	100	53.706	Macaca_nemestrina
ENSPLAG00000002871	LARP4B	100	56.104	ENSMLEG00000035198	LARP4B	100	55.844	Mandrillus_leucophaeus
ENSPLAG00000002871	LARP4B	100	81.900	ENSMAMG00000013742	LARP4B	100	81.538	Mastacembelus_armatus
ENSPLAG00000002871	LARP4B	100	76.346	ENSMZEG00005006498	-	95	89.527	Maylandia_zebra
ENSPLAG00000002871	LARP4B	94	82.603	ENSMZEG00005014594	-	100	83.584	Maylandia_zebra
ENSPLAG00000002871	LARP4B	100	57.766	ENSMGAG00000005472	LARP4B	100	57.895	Meleagris_gallopavo
ENSPLAG00000002871	LARP4B	100	55.397	ENSMAUG00000021657	Larp4b	100	59.612	Mesocricetus_auratus
ENSPLAG00000002871	LARP4B	100	57.008	ENSMICG00000001301	LARP4B	100	56.658	Microcebus_murinus
ENSPLAG00000002871	LARP4B	100	52.597	ENSMOCG00000021452	Larp4b	100	60.345	Microtus_ochrogaster
ENSPLAG00000002871	LARP4B	86	96.552	ENSMMOG00000011253	-	100	72.214	Mola_mola
ENSPLAG00000002871	LARP4B	100	56.785	ENSMODG00000005957	LARP4B	100	56.992	Monodelphis_domestica
ENSPLAG00000002871	LARP4B	100	70.328	ENSMALG00000012432	LARP4B	100	70.798	Monopterus_albus
ENSPLAG00000002871	LARP4B	100	55.527	MGP_CAROLIEiJ_G0018216	Larp4b	100	55.195	Mus_caroli
ENSPLAG00000002871	LARP4B	100	56.047	ENSMUSG00000033499	Larp4b	100	60.000	Mus_musculus
ENSPLAG00000002871	LARP4B	100	56.567	MGP_PahariEiJ_G0019266	Larp4b	100	60.032	Mus_pahari
ENSPLAG00000002871	LARP4B	100	55.917	MGP_SPRETEiJ_G0019074	Larp4b	100	60.161	Mus_spretus
ENSPLAG00000002871	LARP4B	92	56.563	ENSMPUG00000016220	LARP4B	97	55.280	Mustela_putorius_furo
ENSPLAG00000002871	LARP4B	88	55.848	ENSMLUG00000005880	LARP4B	99	54.661	Myotis_lucifugus
ENSPLAG00000002871	LARP4B	100	55.901	ENSNGAG00000001750	Larp4b	100	54.830	Nannospalax_galili
ENSPLAG00000002871	LARP4B	100	69.676	ENSNBRG00000020018	LARP4B	100	69.718	Neolamprologus_brichardi
ENSPLAG00000002871	LARP4B	100	55.859	ENSNLEG00000013442	LARP4B	100	55.599	Nomascus_leucogenys
ENSPLAG00000002871	LARP4B	84	47.148	ENSMEUG00000013114	-	83	47.148	Notamacropus_eugenii
ENSPLAG00000002871	LARP4B	100	53.558	ENSOPRG00000003300	LARP4B	100	53.109	Ochotona_princeps
ENSPLAG00000002871	LARP4B	100	52.021	ENSODEG00000001109	LARP4B	100	55.987	Octodon_degus
ENSPLAG00000002871	LARP4B	100	82.609	ENSONIG00000017705	LARP4B	100	83.248	Oreochromis_niloticus
ENSPLAG00000002871	LARP4B	100	57.124	ENSOANG00000006100	LARP4B	100	57.069	Ornithorhynchus_anatinus
ENSPLAG00000002871	LARP4B	100	54.362	ENSOCUG00000004950	LARP4B	97	53.671	Oryctolagus_cuniculus
ENSPLAG00000002871	LARP4B	100	81.995	ENSORLG00000006080	LARP4B	100	81.995	Oryzias_latipes
ENSPLAG00000002871	LARP4B	100	82.277	ENSORLG00020020940	LARP4B	100	82.277	Oryzias_latipes_hni
ENSPLAG00000002871	LARP4B	100	81.712	ENSORLG00015020608	LARP4B	100	81.712	Oryzias_latipes_hsok
ENSPLAG00000002871	LARP4B	100	79.922	ENSOMEG00000019619	LARP4B	100	85.057	Oryzias_melastigma
ENSPLAG00000002871	LARP4B	96	56.145	ENSOGAG00000011540	LARP4B	99	55.139	Otolemur_garnettii
ENSPLAG00000002871	LARP4B	100	54.830	ENSOARG00000015320	LARP4B	98	54.118	Ovis_aries
ENSPLAG00000002871	LARP4B	100	55.859	ENSPPAG00000039232	LARP4B	100	55.599	Pan_paniscus
ENSPLAG00000002871	LARP4B	98	54.557	ENSPPRG00000009489	LARP4B	100	55.280	Panthera_pardus
ENSPLAG00000002871	LARP4B	98	54.557	ENSPTIG00000008543	LARP4B	100	55.280	Panthera_tigris_altaica
ENSPLAG00000002871	LARP4B	100	55.859	ENSPTRG00000002235	LARP4B	100	55.599	Pan_troglodytes
ENSPLAG00000002871	LARP4B	100	56.047	ENSPANG00000023546	LARP4B	100	53.836	Papio_anubis
ENSPLAG00000002871	LARP4B	99	60.409	ENSPKIG00000012368	LARP4B	99	60.382	Paramormyrops_kingsleyae
ENSPLAG00000002871	LARP4B	75	68.827	ENSPSIG00000005600	LARP4B	99	68.210	Pelodiscus_sinensis
ENSPLAG00000002871	LARP4B	93	66.617	ENSPMGG00000008261	LARP4B	89	66.372	Periophthalmus_magnuspinnatus
ENSPLAG00000002871	LARP4B	100	54.771	ENSPEMG00000014052	Larp4b	100	54.379	Peromyscus_maniculatus_bairdii
ENSPLAG00000002871	LARP4B	100	99.091	ENSPFOG00000000029	LARP4B	100	99.091	Poecilia_formosa
ENSPLAG00000002871	LARP4B	100	98.444	ENSPMEG00000016361	LARP4B	100	98.444	Poecilia_mexicana
ENSPLAG00000002871	LARP4B	100	55.714	ENSPPYG00000002035	LARP4B	97	55.397	Pongo_abelii
ENSPLAG00000002871	LARP4B	100	55.072	ENSPCOG00000014688	LARP4B	100	54.809	Propithecus_coquereli
ENSPLAG00000002871	LARP4B	85	56.840	ENSPVAG00000009784	LARP4B	82	56.352	Pteropus_vampyrus
ENSPLAG00000002871	LARP4B	100	82.609	ENSPNYG00000024252	LARP4B	100	83.269	Pundamilia_nyererei
ENSPLAG00000002871	LARP4B	95	53.129	ENSPNAG00000028956	larp4b	97	53.361	Pygocentrus_nattereri
ENSPLAG00000002871	LARP4B	99	55.671	ENSRNOG00000015888	Larp4b	100	55.150	Rattus_norvegicus
ENSPLAG00000002871	LARP4B	100	56.047	ENSRBIG00000033294	LARP4B	100	55.787	Rhinopithecus_bieti
ENSPLAG00000002871	LARP4B	100	56.047	ENSRROG00000033879	LARP4B	100	55.787	Rhinopithecus_roxellana
ENSPLAG00000002871	LARP4B	100	50.560	ENSSBOG00000021109	LARP4B	100	50.130	Saimiri_boliviensis_boliviensis
ENSPLAG00000002871	LARP4B	100	58.021	ENSSHAG00000013392	LARP4B	100	58.000	Sarcophilus_harrisii
ENSPLAG00000002871	LARP4B	92	61.866	ENSSFOG00015003256	LARP4B	93	59.824	Scleropages_formosus
ENSPLAG00000002871	LARP4B	88	100.000	ENSSMAG00000005982	-	99	100.000	Scophthalmus_maximus
ENSPLAG00000002871	LARP4B	100	85.180	ENSSDUG00000006704	LARP4B	100	85.052	Seriola_dumerili
ENSPLAG00000002871	LARP4B	100	76.705	ENSSLDG00000020660	LARP4B	100	76.629	Seriola_lalandi_dorsalis
ENSPLAG00000002871	LARP4B	67	83.962	ENSSARG00000001243	-	79	84.112	Sorex_araneus
ENSPLAG00000002871	LARP4B	100	62.500	ENSSPUG00000002102	-	100	63.291	Sphenodon_punctatus
ENSPLAG00000002871	LARP4B	100	58.496	ENSSPUG00000013734	-	100	63.333	Sphenodon_punctatus
ENSPLAG00000002871	LARP4B	100	77.318	ENSSPAG00000014628	LARP4B	90	93.103	Stegastes_partitus
ENSPLAG00000002871	LARP4B	100	56.827	ENSSSCG00000011162	LARP4B	100	56.447	Sus_scrofa
ENSPLAG00000002871	LARP4B	100	58.862	ENSTGUG00000000811	-	100	58.995	Taeniopygia_guttata
ENSPLAG00000002871	LARP4B	99	68.701	ENSTNIG00000007991	LARP4B	99	72.614	Tetraodon_nigroviridis
ENSPLAG00000002871	LARP4B	100	70.481	ENSTNIG00000004571	-	98	70.481	Tetraodon_nigroviridis
ENSPLAG00000002871	LARP4B	75	60.317	ENSTTRG00000011151	LARP4B	83	60.317	Tursiops_truncatus
ENSPLAG00000002871	LARP4B	86	56.772	ENSUAMG00000016461	LARP4B	95	57.012	Ursus_americanus
ENSPLAG00000002871	LARP4B	96	55.526	ENSUMAG00000016127	LARP4B	100	54.700	Ursus_maritimus
ENSPLAG00000002871	LARP4B	88	63.658	ENSVVUG00000008641	LARP4B	100	63.658	Vulpes_vulpes
ENSPLAG00000002871	LARP4B	98	59.608	ENSXETG00000016882	larp4b	98	59.864	Xenopus_tropicalis
ENSPLAG00000002871	LARP4B	100	81.536	ENSXCOG00000019952	LARP4B	100	81.536	Xiphophorus_couchianus
ENSPLAG00000002871	LARP4B	100	96.248	ENSXMAG00000021533	LARP4B	100	96.248	Xiphophorus_maculatus