EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000002932 (Gene tree)
Gene ID: 106945965
Gene Symbol: SRL (1 of many)
Alias: -
Full Name: sarcalumenin-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 21264 bases
Position: chrKQ545484.1:291954-313217
Accession: 106945965
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000020190	MMR_HSR1	PF01926.23	2.6e-08	1	1
ENSPLAP00000020204	MMR_HSR1	PF01926.23	5.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000014141	SRL (1 of many)-201	4296	XM_015029992	ENSPLAP00000020204	765 (aa)	XP_014885478	UPI00072ED235
ENSPLAT00000014159	SRL (1 of many)-202	1341	-	ENSPLAP00000020190	446 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000002932's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000002932's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000002932	SRL	89	31.407	ENSPLAG00000003565	ehd4	70	31.407
ENSPLAG00000002932	SRL	92	30.024	ENSPLAG00000023296	ehd1a	75	30.024
ENSPLAG00000002932	SRL	86	31.429	ENSPLAG00000000301	-	68	31.429
ENSPLAG00000002932	SRL	80	33.611	ENSPLAG00000020534	ehd2b	65	34.153
ENSPLAG00000002932	SRL	99	77.232	ENSPLAG00000008017	srl	97	77.232
ENSPLAG00000002932	SRL	84	32.447	ENSPLAG00000001005	ehd3	70	32.216

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000002932	SRL	98	74.661	ENSG00000185739	SRL	99	76.047	Homo_sapiens
ENSPLAG00000002932	SRL	99	88.764	ENSAPOG00000012432	SRL	99	88.764	Acanthochromis_polyacanthus
ENSPLAG00000002932	SRL	100	75.724	ENSAPOG00000018093	srl	99	76.190	Acanthochromis_polyacanthus
ENSPLAG00000002932	SRL	98	74.434	ENSAMEG00000010862	SRL	50	75.566	Ailuropoda_melanoleuca
ENSPLAG00000002932	SRL	99	88.989	ENSACIG00000015419	SRL	99	88.989	Amphilophus_citrinellus
ENSPLAG00000002932	SRL	100	76.615	ENSACIG00000015799	srl	99	76.615	Amphilophus_citrinellus
ENSPLAG00000002932	SRL	97	76.728	ENSAOCG00000007574	srl	100	76.728	Amphiprion_ocellaris
ENSPLAG00000002932	SRL	99	87.082	ENSAOCG00000017049	SRL	98	87.528	Amphiprion_ocellaris
ENSPLAG00000002932	SRL	100	75.947	ENSAPEG00000006911	srl	95	75.947	Amphiprion_percula
ENSPLAG00000002932	SRL	99	82.697	ENSAPEG00000006533	SRL	98	83.519	Amphiprion_percula
ENSPLAG00000002932	SRL	99	77.027	ENSATEG00000024315	srl	95	76.392	Anabas_testudineus
ENSPLAG00000002932	SRL	99	84.165	ENSATEG00000009643	SRL	97	75.333	Anabas_testudineus
ENSPLAG00000002932	SRL	98	74.172	ENSACAG00000016380	SRL	85	73.377	Anolis_carolinensis
ENSPLAG00000002932	SRL	100	76.837	ENSACLG00000027685	srl	98	77.009	Astatotilapia_calliptera
ENSPLAG00000002932	SRL	99	84.816	ENSACLG00000024674	SRL	99	65.304	Astatotilapia_calliptera
ENSPLAG00000002932	SRL	99	75.446	ENSAMXG00000018789	srl	88	75.446	Astyanax_mexicanus
ENSPLAG00000002932	SRL	93	79.616	ENSAMXG00000038693	SRL	100	76.159	Astyanax_mexicanus
ENSPLAG00000002932	SRL	98	74.150	ENSBTAG00000001078	SRL	56	75.283	Bos_taurus
ENSPLAG00000002932	SRL	98	74.887	ENSCJAG00000019750	SRL	93	76.018	Callithrix_jacchus
ENSPLAG00000002932	SRL	98	74.434	ENSCAFG00000019233	SRL	82	75.566	Canis_familiaris
ENSPLAG00000002932	SRL	98	74.434	ENSCAFG00020025024	SRL	64	66.292	Canis_lupus_dingo
ENSPLAG00000002932	SRL	98	74.150	ENSCHIG00000017927	SRL	55	75.283	Capra_hircus
ENSPLAG00000002932	SRL	98	74.661	ENSTSYG00000007919	SRL	99	76.279	Carlito_syrichta
ENSPLAG00000002932	SRL	98	74.887	ENSCPOG00000012643	SRL	94	76.018	Cavia_porcellus
ENSPLAG00000002932	SRL	98	70.588	ENSCCAG00000032646	SRL	100	77.836	Cebus_capucinus
ENSPLAG00000002932	SRL	98	74.830	ENSCATG00000032227	-	93	75.792	Cercocebus_atys
ENSPLAG00000002932	SRL	98	74.887	ENSCLAG00000016242	SRL	94	76.018	Chinchilla_lanigera
ENSPLAG00000002932	SRL	86	77.662	ENSCHOG00000001618	SRL	52	78.961	Choloepus_hoffmanni
ENSPLAG00000002932	SRL	98	78.182	ENSCPBG00000026371	SRL	93	73.673	Chrysemys_picta_bellii
ENSPLAG00000002932	SRL	94	55.582	ENSCING00000005231	-	94	55.582	Ciona_intestinalis
ENSPLAG00000002932	SRL	98	74.661	ENSCANG00000035872	SRL	99	76.047	Colobus_angolensis_palliatus
ENSPLAG00000002932	SRL	98	75.283	ENSCGRG00001016630	Srl	94	76.244	Cricetulus_griseus_chok1gshd
ENSPLAG00000002932	SRL	98	75.283	ENSCGRG00000005458	Srl	94	76.244	Cricetulus_griseus_crigri
ENSPLAG00000002932	SRL	100	75.947	ENSCSEG00000016151	srl	96	75.947	Cynoglossus_semilaevis
ENSPLAG00000002932	SRL	100	82.667	ENSCSEG00000011866	SRL	90	83.111	Cynoglossus_semilaevis
ENSPLAG00000002932	SRL	99	91.266	ENSCVAG00000022465	SRL	97	76.228	Cyprinodon_variegatus
ENSPLAG00000002932	SRL	99	76.667	ENSCVAG00000003513	srl	97	76.667	Cyprinodon_variegatus
ENSPLAG00000002932	SRL	99	76.734	ENSDARG00000104587	srl	95	76.734	Danio_rerio
ENSPLAG00000002932	SRL	84	80.208	ENSDARG00000112959	CABZ01072309.1	100	80.208	Danio_rerio
ENSPLAG00000002932	SRL	98	74.208	ENSDNOG00000011643	SRL	53	75.339	Dasypus_novemcinctus
ENSPLAG00000002932	SRL	98	75.113	ENSDORG00000014807	Srl	94	76.244	Dipodomys_ordii
ENSPLAG00000002932	SRL	83	62.331	ENSEBUG00000015937	srl	93	62.331	Eptatretus_burgeri
ENSPLAG00000002932	SRL	98	74.603	ENSEASG00005000942	SRL	53	75.737	Equus_asinus_asinus
ENSPLAG00000002932	SRL	98	74.603	ENSECAG00000024219	SRL	93	75.737	Equus_caballus
ENSPLAG00000002932	SRL	98	74.342	ENSELUG00000015616	srl	96	72.385	Esox_lucius
ENSPLAG00000002932	SRL	99	78.761	ENSELUG00000022266	SRL	53	73.400	Esox_lucius
ENSPLAG00000002932	SRL	98	74.887	ENSFCAG00000022075	SRL	97	71.489	Felis_catus
ENSPLAG00000002932	SRL	98	75.227	ENSFALG00000004328	SRL	63	75.227	Ficedula_albicollis
ENSPLAG00000002932	SRL	98	75.113	ENSFDAG00000006199	SRL	94	76.244	Fukomys_damarensis
ENSPLAG00000002932	SRL	99	76.562	ENSFHEG00000011239	srl	97	76.562	Fundulus_heteroclitus
ENSPLAG00000002932	SRL	99	91.011	ENSFHEG00000011854	SRL	99	92.135	Fundulus_heteroclitus
ENSPLAG00000002932	SRL	98	75.110	ENSGMOG00000014954	srl	100	75.110	Gadus_morhua
ENSPLAG00000002932	SRL	98	75.455	ENSGALG00000038884	SRL	93	75.455	Gallus_gallus
ENSPLAG00000002932	SRL	100	97.534	ENSGAFG00000016984	SRL	100	97.534	Gambusia_affinis
ENSPLAG00000002932	SRL	99	77.009	ENSGAFG00000000010	srl	97	77.009	Gambusia_affinis
ENSPLAG00000002932	SRL	99	75.165	ENSGACG00000011332	srl	100	75.165	Gasterosteus_aculeatus
ENSPLAG00000002932	SRL	98	75.455	ENSGAGG00000015590	SRL	51	66.794	Gopherus_agassizii
ENSPLAG00000002932	SRL	98	74.830	ENSGGOG00000011312	-	93	75.792	Gorilla_gorilla
ENSPLAG00000002932	SRL	100	76.837	ENSHBUG00000007581	srl	98	77.009	Haplochromis_burtoni
ENSPLAG00000002932	SRL	99	85.249	ENSHBUG00000015710	SRL	99	65.446	Haplochromis_burtoni
ENSPLAG00000002932	SRL	98	74.887	ENSHGLG00000015271	SRL	94	76.018	Heterocephalus_glaber_female
ENSPLAG00000002932	SRL	98	74.887	ENSHGLG00100019378	SRL	94	76.018	Heterocephalus_glaber_male
ENSPLAG00000002932	SRL	100	76.392	ENSHCOG00000008687	srl	99	76.392	Hippocampus_comes
ENSPLAG00000002932	SRL	99	83.772	ENSHCOG00000001012	SRL	69	72.978	Hippocampus_comes
ENSPLAG00000002932	SRL	98	70.087	ENSIPUG00000011609	SRL	100	70.306	Ictalurus_punctatus
ENSPLAG00000002932	SRL	100	74.165	ENSIPUG00000012513	srl	96	74.165	Ictalurus_punctatus
ENSPLAG00000002932	SRL	98	75.113	ENSSTOG00000021151	-	94	76.244	Ictidomys_tridecemlineatus
ENSPLAG00000002932	SRL	98	75.113	ENSJJAG00000016400	Srl	94	76.244	Jaculus_jaculus
ENSPLAG00000002932	SRL	98	90.183	ENSKMAG00000019537	SRL	100	90.183	Kryptolebias_marmoratus
ENSPLAG00000002932	SRL	98	77.701	ENSKMAG00000014115	srl	99	74.889	Kryptolebias_marmoratus
ENSPLAG00000002932	SRL	99	76.854	ENSLBEG00000026643	srl	97	74.145	Labrus_bergylta
ENSPLAG00000002932	SRL	99	84.821	ENSLBEG00000013811	SRL	97	85.268	Labrus_bergylta
ENSPLAG00000002932	SRL	98	73.077	ENSLACG00000002825	SRL	98	73.077	Latimeria_chalumnae
ENSPLAG00000002932	SRL	98	76.697	ENSLOCG00000002644	srl	94	76.697	Lepisosteus_oculatus
ENSPLAG00000002932	SRL	98	74.376	ENSLAFG00000006329	SRL	50	75.339	Loxodonta_africana
ENSPLAG00000002932	SRL	96	74.884	ENSMFAG00000037383	SRL	99	76.047	Macaca_fascicularis
ENSPLAG00000002932	SRL	98	74.830	ENSMNEG00000019236	-	93	75.792	Macaca_nemestrina
ENSPLAG00000002932	SRL	98	68.552	ENSMLEG00000032156	SRL	93	69.683	Mandrillus_leucophaeus
ENSPLAG00000002932	SRL	99	76.577	ENSMAMG00000023322	srl	95	75.947	Mastacembelus_armatus
ENSPLAG00000002932	SRL	99	84.783	ENSMAMG00000013756	SRL	77	79.228	Mastacembelus_armatus
ENSPLAG00000002932	SRL	100	76.837	ENSMZEG00005004548	srl	98	77.009	Maylandia_zebra
ENSPLAG00000002932	SRL	99	85.033	ENSMZEG00005004010	SRL	97	66.582	Maylandia_zebra
ENSPLAG00000002932	SRL	98	75.455	ENSMGAG00000009342	SRL	92	80.000	Meleagris_gallopavo
ENSPLAG00000002932	SRL	98	75.113	ENSMICG00000032307	SRL	93	76.244	Microcebus_murinus
ENSPLAG00000002932	SRL	98	74.887	ENSMOCG00000008208	Srl	94	76.018	Microtus_ochrogaster
ENSPLAG00000002932	SRL	98	83.921	ENSMMOG00000021572	SRL	99	83.921	Mola_mola
ENSPLAG00000002932	SRL	99	76.577	ENSMMOG00000013970	srl	99	76.577	Mola_mola
ENSPLAG00000002932	SRL	98	77.098	ENSMODG00000016380	-	50	77.098	Monodelphis_domestica
ENSPLAG00000002932	SRL	100	75.501	ENSMALG00000005039	srl	99	75.501	Monopterus_albus
ENSPLAG00000002932	SRL	93	86.779	ENSMALG00000000670	SRL	98	86.779	Monopterus_albus
ENSPLAG00000002932	SRL	98	76.244	MGP_CAROLIEiJ_G0020400	Srl	94	76.244	Mus_caroli
ENSPLAG00000002932	SRL	98	76.417	ENSMUSG00000022519	Srl	94	76.244	Mus_musculus
ENSPLAG00000002932	SRL	98	76.244	MGP_SPRETEiJ_G0021294	Srl	94	76.244	Mus_spretus
ENSPLAG00000002932	SRL	98	74.434	ENSMPUG00000015025	SRL	54	75.566	Mustela_putorius_furo
ENSPLAG00000002932	SRL	98	75.113	ENSMLUG00000030733	SRL	56	76.244	Myotis_lucifugus
ENSPLAG00000002932	SRL	98	75.339	ENSNGAG00000019741	Srl	94	76.471	Nannospalax_galili
ENSPLAG00000002932	SRL	100	76.837	ENSNBRG00000023775	srl	96	76.837	Neolamprologus_brichardi
ENSPLAG00000002932	SRL	99	84.382	ENSNBRG00000002422	SRL	99	64.828	Neolamprologus_brichardi
ENSPLAG00000002932	SRL	98	69.910	ENSNLEG00000029051	SRL	93	71.041	Nomascus_leucogenys
ENSPLAG00000002932	SRL	98	69.910	ENSOPRG00000000477	-	52	71.041	Ochotona_princeps
ENSPLAG00000002932	SRL	98	75.566	ENSODEG00000013256	SRL	94	76.697	Octodon_degus
ENSPLAG00000002932	SRL	100	76.615	ENSONIG00000005192	srl	95	76.615	Oreochromis_niloticus
ENSPLAG00000002932	SRL	98	74.434	ENSOCUG00000025140	SRL	54	68.031	Oryctolagus_cuniculus
ENSPLAG00000002932	SRL	99	88.989	ENSORLG00000015064	SRL	98	88.989	Oryzias_latipes
ENSPLAG00000002932	SRL	99	77.027	ENSORLG00000008291	srl	91	79.275	Oryzias_latipes
ENSPLAG00000002932	SRL	99	77.477	ENSORLG00020019784	srl	79	79.793	Oryzias_latipes_hni
ENSPLAG00000002932	SRL	99	89.213	ENSORLG00020018173	SRL	98	89.213	Oryzias_latipes_hni
ENSPLAG00000002932	SRL	99	89.213	ENSORLG00015019063	SRL	98	89.213	Oryzias_latipes_hsok
ENSPLAG00000002932	SRL	99	77.252	ENSORLG00015009342	srl	94	74.786	Oryzias_latipes_hsok
ENSPLAG00000002932	SRL	99	85.683	ENSOMEG00000005682	SRL	81	75.973	Oryzias_melastigma
ENSPLAG00000002932	SRL	99	77.703	ENSOMEG00000010006	srl	98	77.727	Oryzias_melastigma
ENSPLAG00000002932	SRL	98	74.434	ENSOGAG00000029266	SRL	54	75.566	Otolemur_garnettii
ENSPLAG00000002932	SRL	98	74.150	ENSOARG00000003074	SRL	55	75.283	Ovis_aries
ENSPLAG00000002932	SRL	98	74.830	ENSPPAG00000024919	-	99	76.047	Pan_paniscus
ENSPLAG00000002932	SRL	98	74.887	ENSPPRG00000010274	SRL	99	75.349	Panthera_pardus
ENSPLAG00000002932	SRL	98	74.887	ENSPTIG00000015162	SRL	99	75.349	Panthera_tigris_altaica
ENSPLAG00000002932	SRL	98	74.830	ENSPTRG00000007712	SRL	99	76.047	Pan_troglodytes
ENSPLAG00000002932	SRL	98	74.661	ENSPANG00000013804	SRL	95	75.792	Papio_anubis
ENSPLAG00000002932	SRL	99	77.009	ENSPKIG00000006405	srl	95	77.009	Paramormyrops_kingsleyae
ENSPLAG00000002932	SRL	99	74.664	ENSPKIG00000024974	SRL	88	74.664	Paramormyrops_kingsleyae
ENSPLAG00000002932	SRL	98	84.738	ENSPMGG00000023505	-	99	84.738	Periophthalmus_magnuspinnatus
ENSPLAG00000002932	SRL	98	77.376	ENSPMGG00000021081	srl	95	77.376	Periophthalmus_magnuspinnatus
ENSPLAG00000002932	SRL	98	75.113	ENSPEMG00000015842	Srl	94	76.244	Peromyscus_maniculatus_bairdii
ENSPLAG00000002932	SRL	93	64.450	ENSPMAG00000004786	srl	99	64.450	Petromyzon_marinus
ENSPLAG00000002932	SRL	98	76.871	ENSPCIG00000012128	SRL	96	76.871	Phascolarctos_cinereus
ENSPLAG00000002932	SRL	99	75.435	ENSPFOG00000011408	srl	95	75.435	Poecilia_formosa
ENSPLAG00000002932	SRL	100	98.693	ENSPMEG00000005890	SRL	100	98.693	Poecilia_mexicana
ENSPLAG00000002932	SRL	99	77.232	ENSPMEG00000006745	srl	97	77.232	Poecilia_mexicana
ENSPLAG00000002932	SRL	100	98.655	ENSPREG00000000315	SRL	100	98.655	Poecilia_reticulata
ENSPLAG00000002932	SRL	99	77.009	ENSPREG00000007751	srl	99	77.009	Poecilia_reticulata
ENSPLAG00000002932	SRL	96	74.419	ENSPPYG00000007053	SRL	100	75.581	Pongo_abelii
ENSPLAG00000002932	SRL	98	75.057	ENSPCAG00000003378	-	50	76.190	Procavia_capensis
ENSPLAG00000002932	SRL	98	74.661	ENSPCOG00000023135	SRL	99	76.279	Propithecus_coquereli
ENSPLAG00000002932	SRL	98	75.113	ENSPVAG00000006586	SRL	54	76.244	Pteropus_vampyrus
ENSPLAG00000002932	SRL	99	85.033	ENSPNYG00000003423	SRL	99	65.483	Pundamilia_nyererei
ENSPLAG00000002932	SRL	100	76.837	ENSPNYG00000001200	srl	98	77.009	Pundamilia_nyererei
ENSPLAG00000002932	SRL	100	75.056	ENSPNAG00000023106	srl	96	75.056	Pygocentrus_nattereri
ENSPLAG00000002932	SRL	99	78.700	ENSPNAG00000007361	-	92	78.700	Pygocentrus_nattereri
ENSPLAG00000002932	SRL	98	75.057	ENSSBOG00000029273	SRL	93	76.018	Saimiri_boliviensis_boliviensis
ENSPLAG00000002932	SRL	99	76.577	ENSSFOG00015009773	srl	96	75.947	Scleropages_formosus
ENSPLAG00000002932	SRL	99	75.621	ENSSFOG00015021327	SRL	50	75.336	Scleropages_formosus
ENSPLAG00000002932	SRL	100	82.937	ENSSMAG00000002232	SRL	72	73.102	Scophthalmus_maximus
ENSPLAG00000002932	SRL	99	76.457	ENSSMAG00000016274	srl	98	76.339	Scophthalmus_maximus
ENSPLAG00000002932	SRL	99	77.354	ENSSDUG00000010808	srl	98	77.354	Seriola_dumerili
ENSPLAG00000002932	SRL	100	86.313	ENSSDUG00000009161	SRL	100	86.313	Seriola_dumerili
ENSPLAG00000002932	SRL	100	77.060	ENSSLDG00000022024	srl	97	77.232	Seriola_lalandi_dorsalis
ENSPLAG00000002932	SRL	98	85.934	ENSSLDG00000014601	SRL	99	90.110	Seriola_lalandi_dorsalis
ENSPLAG00000002932	SRL	99	73.874	ENSSPUG00000016859	SRL	98	73.874	Sphenodon_punctatus
ENSPLAG00000002932	SRL	99	87.865	ENSSPAG00000014254	SRL	99	87.865	Stegastes_partitus
ENSPLAG00000002932	SRL	98	76.923	ENSSPAG00000019105	srl	94	76.923	Stegastes_partitus
ENSPLAG00000002932	SRL	98	74.603	ENSSSCG00000007949	SRL	98	75.737	Sus_scrofa
ENSPLAG00000002932	SRL	98	75.227	ENSTGUG00000003951	-	97	75.227	Taeniopygia_guttata
ENSPLAG00000002932	SRL	80	80.618	ENSTGUG00000016121	-	98	80.618	Taeniopygia_guttata
ENSPLAG00000002932	SRL	93	85.817	ENSTRUG00000013310	SRL	97	61.316	Takifugu_rubripes
ENSPLAG00000002932	SRL	100	76.169	ENSTRUG00000006005	srl	96	76.169	Takifugu_rubripes
ENSPLAG00000002932	SRL	100	75.947	ENSTNIG00000009739	srl	96	75.947	Tetraodon_nigroviridis
ENSPLAG00000002932	SRL	98	74.434	ENSUAMG00000005701	SRL	55	75.566	Ursus_americanus
ENSPLAG00000002932	SRL	98	74.434	ENSUMAG00000002574	SRL	55	75.566	Ursus_maritimus
ENSPLAG00000002932	SRL	98	74.434	ENSVVUG00000016331	-	57	66.541	Vulpes_vulpes
ENSPLAG00000002932	SRL	98	75.113	ENSXETG00000017313	srl	98	75.113	Xenopus_tropicalis
ENSPLAG00000002932	SRL	94	78.251	ENSXCOG00000010424	srl	97	78.251	Xiphophorus_couchianus
ENSPLAG00000002932	SRL	100	97.758	ENSXCOG00000014584	SRL	99	97.758	Xiphophorus_couchianus
ENSPLAG00000002932	SRL	99	77.009	ENSXMAG00000004625	srl	91	77.009	Xiphophorus_maculatus
ENSPLAG00000002932	SRL	100	95.238	ENSXMAG00000027598	SRL	100	95.232	Xiphophorus_maculatus