EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000003161 (Gene tree)
Gene ID: 106938035
Gene Symbol: pop4
Alias: -
Full Name: POP4 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 8446 bases
Position: chrKQ547790.1:28896-37341
Accession: 106938035
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000020345	UPF0086	PF01868.16	3.5e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000013826	-	2278	XM_015019863	ENSPLAP00000020345	222 (aa)	XP_014875349	UPI00072E0A6C

Gene Model

Click here to download ENSPLAG00000003161's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000003161's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000003161	pop4	91	60.099	ENSG00000105171	POP4	100	73.958	Homo_sapiens
ENSPLAG00000003161	pop4	98	55.760	ENSAMEG00000018329	-	98	55.760	Ailuropoda_melanoleuca
ENSPLAG00000003161	pop4	93	51.675	ENSAMEG00000003172	-	94	51.675	Ailuropoda_melanoleuca
ENSPLAG00000003161	pop4	99	71.364	ENSACIG00000008358	pop4	99	71.364	Amphilophus_citrinellus
ENSPLAG00000003161	pop4	91	74.752	ENSAOCG00000010116	pop4	98	74.752	Amphiprion_ocellaris
ENSPLAG00000003161	pop4	99	72.851	ENSAPEG00000002829	pop4	93	72.851	Amphiprion_percula
ENSPLAG00000003161	pop4	99	73.756	ENSATEG00000013028	pop4	99	73.756	Anabas_testudineus
ENSPLAG00000003161	pop4	91	56.650	ENSAPLG00000014051	POP4	98	57.143	Anas_platyrhynchos
ENSPLAG00000003161	pop4	99	56.364	ENSANAG00000020295	POP4	99	57.014	Aotus_nancymaae
ENSPLAG00000003161	pop4	100	71.622	ENSACLG00000000526	pop4	100	71.622	Astatotilapia_calliptera
ENSPLAG00000003161	pop4	100	63.229	ENSAMXG00000002899	pop4	100	63.229	Astyanax_mexicanus
ENSPLAG00000003161	pop4	98	56.682	ENSBTAG00000002223	POP4	98	56.682	Bos_taurus
ENSPLAG00000003161	pop4	99	55.909	ENSCJAG00000046750	POP4	95	66.667	Callithrix_jacchus
ENSPLAG00000003161	pop4	77	64.912	ENSCAFG00000007630	POP4	93	64.912	Canis_familiaris
ENSPLAG00000003161	pop4	94	58.173	ENSCHIG00000016743	POP4	92	58.173	Capra_hircus
ENSPLAG00000003161	pop4	92	58.049	ENSTSYG00000003488	POP4	93	58.049	Carlito_syrichta
ENSPLAG00000003161	pop4	98	38.249	ENSCAPG00000011105	POP4	99	38.991	Cavia_aperea
ENSPLAG00000003161	pop4	88	59.184	ENSCPOG00000002992	POP4	89	59.898	Cavia_porcellus
ENSPLAG00000003161	pop4	64	61.702	ENSCCAG00000034244	-	91	51.442	Cebus_capucinus
ENSPLAG00000003161	pop4	99	55.909	ENSCCAG00000020285	-	99	55.909	Cebus_capucinus
ENSPLAG00000003161	pop4	91	60.784	ENSCATG00000036022	POP4	100	73.958	Cercocebus_atys
ENSPLAG00000003161	pop4	94	58.173	ENSCLAG00000013162	POP4	92	58.852	Chinchilla_lanigera
ENSPLAG00000003161	pop4	91	60.099	ENSCSAG00000004868	POP4	93	60.784	Chlorocebus_sabaeus
ENSPLAG00000003161	pop4	98	39.631	ENSCHOG00000002071	POP4	99	39.631	Choloepus_hoffmanni
ENSPLAG00000003161	pop4	99	56.818	ENSCPBG00000016132	POP4	99	56.818	Chrysemys_picta_bellii
ENSPLAG00000003161	pop4	55	36.066	ENSCING00000023871	-	96	30.412	Ciona_intestinalis
ENSPLAG00000003161	pop4	91	59.606	ENSCANG00000005924	POP4	100	60.294	Colobus_angolensis_palliatus
ENSPLAG00000003161	pop4	94	60.096	ENSCGRG00001017185	Pop4	92	60.096	Cricetulus_griseus_chok1gshd
ENSPLAG00000003161	pop4	94	60.096	ENSCGRG00000008155	Pop4	92	60.096	Cricetulus_griseus_crigri
ENSPLAG00000003161	pop4	97	65.581	ENSCSEG00000002946	pop4	97	65.581	Cynoglossus_semilaevis
ENSPLAG00000003161	pop4	99	60.633	ENSCVAG00000018602	POP4	95	60.633	Cyprinodon_variegatus
ENSPLAG00000003161	pop4	97	60.930	ENSDARG00000101472	pop4	97	60.930	Danio_rerio
ENSPLAG00000003161	pop4	94	58.173	ENSDNOG00000047663	POP4	81	58.173	Dasypus_novemcinctus
ENSPLAG00000003161	pop4	73	53.374	ENSDORG00000008577	Pop4	91	53.374	Dipodomys_ordii
ENSPLAG00000003161	pop4	77	30.556	FBgn0035831	CG8038	87	30.556	Drosophila_melanogaster
ENSPLAG00000003161	pop4	98	47.005	ENSETEG00000003607	POP4	99	47.005	Echinops_telfairi
ENSPLAG00000003161	pop4	67	53.691	ENSEBUG00000010447	pop4	62	51.250	Eptatretus_burgeri
ENSPLAG00000003161	pop4	99	37.273	ENSEBUG00000008575	pop4	99	37.273	Eptatretus_burgeri
ENSPLAG00000003161	pop4	67	46.980	ENSEBUG00000004305	pop4	68	45.000	Eptatretus_burgeri
ENSPLAG00000003161	pop4	94	67.308	ENSECAG00000020206	POP4	84	67.308	Equus_caballus
ENSPLAG00000003161	pop4	88	42.347	ENSEEUG00000013109	POP4	98	42.347	Erinaceus_europaeus
ENSPLAG00000003161	pop4	99	60.000	ENSELUG00000019812	pop4	99	60.909	Esox_lucius
ENSPLAG00000003161	pop4	88	60.204	ENSFCAG00000001619	POP4	98	55.300	Felis_catus
ENSPLAG00000003161	pop4	98	57.798	ENSFALG00000000206	POP4	97	57.798	Ficedula_albicollis
ENSPLAG00000003161	pop4	94	58.173	ENSFDAG00000017859	POP4	92	58.173	Fukomys_damarensis
ENSPLAG00000003161	pop4	88	74.619	ENSFHEG00000012745	pop4	89	74.619	Fundulus_heteroclitus
ENSPLAG00000003161	pop4	82	67.213	ENSGMOG00000000335	pop4	87	67.213	Gadus_morhua
ENSPLAG00000003161	pop4	99	55.909	ENSGALG00000041972	POP4	92	55.909	Gallus_gallus
ENSPLAG00000003161	pop4	80	89.385	ENSGAFG00000003571	pop4	99	89.385	Gambusia_affinis
ENSPLAG00000003161	pop4	100	68.161	ENSGACG00000014510	pop4	99	75.956	Gasterosteus_aculeatus
ENSPLAG00000003161	pop4	99	58.182	ENSGAGG00000024544	POP4	79	58.182	Gopherus_agassizii
ENSPLAG00000003161	pop4	95	56.561	ENSGGOG00000038346	POP4	100	57.207	Gorilla_gorilla
ENSPLAG00000003161	pop4	100	71.171	ENSHBUG00000021821	pop4	100	71.171	Haplochromis_burtoni
ENSPLAG00000003161	pop4	94	58.173	ENSHGLG00000015798	POP4	92	58.173	Heterocephalus_glaber_female
ENSPLAG00000003161	pop4	94	58.173	ENSHGLG00100009737	POP4	92	58.173	Heterocephalus_glaber_male
ENSPLAG00000003161	pop4	100	68.919	ENSHCOG00000020937	pop4	100	68.919	Hippocampus_comes
ENSPLAG00000003161	pop4	99	60.000	ENSIPUG00000013652	pop4	99	60.000	Ictalurus_punctatus
ENSPLAG00000003161	pop4	98	56.221	ENSSTOG00000011016	POP4	98	56.221	Ictidomys_tridecemlineatus
ENSPLAG00000003161	pop4	88	60.714	ENSJJAG00000013376	Pop4	89	60.714	Jaculus_jaculus
ENSPLAG00000003161	pop4	100	73.991	ENSKMAG00000012250	pop4	100	73.991	Kryptolebias_marmoratus
ENSPLAG00000003161	pop4	100	65.919	ENSLBEG00000014139	pop4	100	68.161	Labrus_bergylta
ENSPLAG00000003161	pop4	100	65.919	ENSLBEG00000018846	-	100	68.161	Labrus_bergylta
ENSPLAG00000003161	pop4	98	52.074	ENSLACG00000008581	POP4	97	52.074	Latimeria_chalumnae
ENSPLAG00000003161	pop4	99	60.909	ENSLOCG00000005597	pop4	99	60.909	Lepisosteus_oculatus
ENSPLAG00000003161	pop4	98	55.760	ENSLAFG00000000084	POP4	98	56.422	Loxodonta_africana
ENSPLAG00000003161	pop4	91	60.099	ENSMFAG00000029606	POP4	92	60.784	Macaca_fascicularis
ENSPLAG00000003161	pop4	91	60.099	ENSMMUG00000017424	POP4	92	60.099	Macaca_mulatta
ENSPLAG00000003161	pop4	91	60.099	ENSMNEG00000031374	POP4	92	60.099	Macaca_nemestrina
ENSPLAG00000003161	pop4	91	60.591	ENSMLEG00000043454	POP4	92	61.765	Mandrillus_leucophaeus
ENSPLAG00000003161	pop4	99	73.756	ENSMAMG00000011716	pop4	99	73.756	Mastacembelus_armatus
ENSPLAG00000003161	pop4	100	71.622	ENSMZEG00005002360	pop4	100	71.622	Maylandia_zebra
ENSPLAG00000003161	pop4	98	55.300	ENSMGAG00000005337	POP4	96	55.300	Meleagris_gallopavo
ENSPLAG00000003161	pop4	94	58.173	ENSMAUG00000020110	Pop4	92	58.173	Mesocricetus_auratus
ENSPLAG00000003161	pop4	96	57.848	ENSMICG00000035730	POP4	99	58.929	Microcebus_murinus
ENSPLAG00000003161	pop4	99	69.545	ENSMMOG00000015321	pop4	99	69.545	Mola_mola
ENSPLAG00000003161	pop4	99	54.545	ENSMODG00000029406	POP4	95	55.455	Monodelphis_domestica
ENSPLAG00000003161	pop4	100	72.523	ENSMALG00000012571	pop4	100	72.973	Monopterus_albus
ENSPLAG00000003161	pop4	88	62.245	MGP_CAROLIEiJ_G0029600	Pop4	89	62.245	Mus_caroli
ENSPLAG00000003161	pop4	88	61.735	ENSMUSG00000030423	Pop4	89	61.735	Mus_musculus
ENSPLAG00000003161	pop4	88	61.735	MGP_SPRETEiJ_G0030699	Pop4	89	62.437	Mus_spretus
ENSPLAG00000003161	pop4	98	55.760	ENSMPUG00000008041	-	98	55.760	Mustela_putorius_furo
ENSPLAG00000003161	pop4	98	49.541	ENSMPUG00000008063	-	98	49.541	Mustela_putorius_furo
ENSPLAG00000003161	pop4	98	44.495	ENSMLUG00000010774	POP4	98	44.495	Myotis_lucifugus
ENSPLAG00000003161	pop4	56	68.000	ENSMEUG00000003636	-	100	68.000	Notamacropus_eugenii
ENSPLAG00000003161	pop4	93	59.709	ENSOPRG00000004736	POP4	100	60.577	Ochotona_princeps
ENSPLAG00000003161	pop4	94	57.692	ENSODEG00000013025	POP4	95	58.373	Octodon_degus
ENSPLAG00000003161	pop4	99	70.909	ENSONIG00000003458	pop4	97	70.909	Oreochromis_niloticus
ENSPLAG00000003161	pop4	94	60.096	ENSOCUG00000015974	POP4	92	60.096	Oryctolagus_cuniculus
ENSPLAG00000003161	pop4	99	69.683	ENSORLG00000020317	pop4	99	69.683	Oryzias_latipes
ENSPLAG00000003161	pop4	100	69.955	ENSORLG00015011624	pop4	100	69.955	Oryzias_latipes_hsok
ENSPLAG00000003161	pop4	100	69.955	ENSOMEG00000002538	pop4	100	69.955	Oryzias_melastigma
ENSPLAG00000003161	pop4	94	59.135	ENSOGAG00000011168	POP4	94	60.287	Otolemur_garnettii
ENSPLAG00000003161	pop4	95	57.619	ENSOARG00000004041	POP4	92	57.619	Ovis_aries
ENSPLAG00000003161	pop4	91	60.099	ENSPPAG00000040372	POP4	92	60.784	Pan_paniscus
ENSPLAG00000003161	pop4	88	60.204	ENSPPRG00000010502	POP4	98	55.300	Panthera_pardus
ENSPLAG00000003161	pop4	88	60.204	ENSPTIG00000016598	POP4	98	55.300	Panthera_tigris_altaica
ENSPLAG00000003161	pop4	91	60.099	ENSPTRG00000010779	POP4	92	60.784	Pan_troglodytes
ENSPLAG00000003161	pop4	91	60.099	ENSPANG00000008546	POP4	92	60.784	Papio_anubis
ENSPLAG00000003161	pop4	88	64.796	ENSPKIG00000004468	pop4	86	64.796	Paramormyrops_kingsleyae
ENSPLAG00000003161	pop4	98	58.525	ENSPSIG00000015690	POP4	100	60.591	Pelodiscus_sinensis
ENSPLAG00000003161	pop4	91	61.951	ENSPMGG00000008608	pop4	98	63.415	Periophthalmus_magnuspinnatus
ENSPLAG00000003161	pop4	88	61.735	ENSPEMG00000014034	-	90	61.735	Peromyscus_maniculatus_bairdii
ENSPLAG00000003161	pop4	93	49.763	ENSPEMG00000019982	-	96	50.000	Peromyscus_maniculatus_bairdii
ENSPLAG00000003161	pop4	65	64.138	ENSPMAG00000006265	pop4	73	64.138	Petromyzon_marinus
ENSPLAG00000003161	pop4	99	53.636	ENSPCIG00000024738	POP4	95	53.636	Phascolarctos_cinereus
ENSPLAG00000003161	pop4	100	99.099	ENSPFOG00000000925	pop4	100	99.099	Poecilia_formosa
ENSPLAG00000003161	pop4	100	99.099	ENSPMEG00000002475	pop4	100	99.099	Poecilia_mexicana
ENSPLAG00000003161	pop4	99	93.636	ENSPREG00000022403	pop4	93	93.636	Poecilia_reticulata
ENSPLAG00000003161	pop4	91	60.099	ENSPPYG00000009805	POP4	92	60.784	Pongo_abelii
ENSPLAG00000003161	pop4	99	56.364	ENSPCAG00000007737	POP4	99	56.364	Procavia_capensis
ENSPLAG00000003161	pop4	98	56.221	ENSPCOG00000018055	POP4	98	56.221	Propithecus_coquereli
ENSPLAG00000003161	pop4	99	55.455	ENSPVAG00000006069	POP4	99	55.455	Pteropus_vampyrus
ENSPLAG00000003161	pop4	100	71.171	ENSPNYG00000020038	pop4	100	71.171	Pundamilia_nyererei
ENSPLAG00000003161	pop4	99	62.443	ENSPNAG00000005591	pop4	99	62.443	Pygocentrus_nattereri
ENSPLAG00000003161	pop4	94	59.615	ENSRNOG00000027646	Pop4	92	59.615	Rattus_norvegicus
ENSPLAG00000003161	pop4	72	56.875	ENSRBIG00000044769	POP4	82	65.116	Rhinopithecus_bieti
ENSPLAG00000003161	pop4	91	60.099	ENSRROG00000028903	POP4	92	60.784	Rhinopithecus_roxellana
ENSPLAG00000003161	pop4	57	31.429	YBR257W	-	50	31.429	Saccharomyces_cerevisiae
ENSPLAG00000003161	pop4	99	56.364	ENSSBOG00000032445	POP4	99	56.364	Saimiri_boliviensis_boliviensis
ENSPLAG00000003161	pop4	91	58.911	ENSSHAG00000016888	POP4	90	58.911	Sarcophilus_harrisii
ENSPLAG00000003161	pop4	98	61.290	ENSSFOG00015014556	pop4	96	61.290	Scleropages_formosus
ENSPLAG00000003161	pop4	100	72.646	ENSSMAG00000016611	pop4	100	72.646	Scophthalmus_maximus
ENSPLAG00000003161	pop4	99	72.398	ENSSDUG00000019865	pop4	89	72.398	Seriola_dumerili
ENSPLAG00000003161	pop4	99	71.041	ENSSLDG00000001763	pop4	99	71.041	Seriola_lalandi_dorsalis
ENSPLAG00000003161	pop4	98	57.604	ENSSARG00000004748	POP4	99	57.604	Sorex_araneus
ENSPLAG00000003161	pop4	99	75.113	ENSSPAG00000014364	pop4	99	75.113	Stegastes_partitus
ENSPLAG00000003161	pop4	94	57.692	ENSSSCG00000002854	POP4	92	57.692	Sus_scrofa
ENSPLAG00000003161	pop4	91	59.204	ENSTGUG00000008953	POP4	100	59.204	Taeniopygia_guttata
ENSPLAG00000003161	pop4	88	67.857	ENSTNIG00000006401	pop4	100	65.517	Tetraodon_nigroviridis
ENSPLAG00000003161	pop4	98	57.143	ENSTBEG00000002194	POP4	98	57.143	Tupaia_belangeri
ENSPLAG00000003161	pop4	88	59.694	ENSTTRG00000005882	POP4	98	54.378	Tursiops_truncatus
ENSPLAG00000003161	pop4	98	55.760	ENSUAMG00000003049	-	98	55.760	Ursus_americanus
ENSPLAG00000003161	pop4	98	55.760	ENSUMAG00000007522	-	98	55.760	Ursus_maritimus
ENSPLAG00000003161	pop4	91	58.333	ENSVVUG00000016876	-	71	58.333	Vulpes_vulpes
ENSPLAG00000003161	pop4	98	54.378	ENSXETG00000017598	pop4	98	54.839	Xenopus_tropicalis
ENSPLAG00000003161	pop4	99	90.090	ENSXCOG00000017695	pop4	93	90.090	Xiphophorus_couchianus
ENSPLAG00000003161	pop4	99	90.090	ENSXMAG00000013862	pop4	93	90.090	Xiphophorus_maculatus