EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000003181 (Gene tree)
Gene ID: 106938025
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-13
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 6667 bases
Position: chrLMXD01030143.1:70657-77323
Accession: 106938025
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000020335	MMR_HSR1	PF01926.23	6.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000013783	-	2834	XM_015019853	ENSPLAP00000020335	200 (aa)	XP_014875339	UPI000443C230

Gene Model

Click here to download ENSPLAG00000003181's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000003181's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000003181	-	98	53.535	ENSPLAG00000006520	rab1ab	98	53.535
ENSPLAG00000003181	-	82	41.071	ENSPLAG00000006777	-	75	41.071
ENSPLAG00000003181	-	80	49.686	ENSPLAG00000014207	-	73	49.686
ENSPLAG00000003181	-	95	42.347	ENSPLAG00000019136	rab18b	93	42.347
ENSPLAG00000003181	-	85	54.386	ENSPLAG00000020989	rab35b	100	48.293
ENSPLAG00000003181	-	79	39.375	ENSPLAG00000005074	rab34b	63	39.375
ENSPLAG00000003181	-	79	44.937	ENSPLAG00000019707	rab6bb	76	44.937
ENSPLAG00000003181	-	83	42.012	ENSPLAG00000007773	si:dkey-34d22.5	76	42.012
ENSPLAG00000003181	-	84	52.381	ENSPLAG00000013594	rab12	70	51.163
ENSPLAG00000003181	-	95	51.777	ENSPLAG00000005869	zgc:171927	92	51.777
ENSPLAG00000003181	-	87	39.583	ENSPLAG00000021278	rab33ba	79	39.583
ENSPLAG00000003181	-	87	41.379	ENSPLAG00000016333	-	79	41.379
ENSPLAG00000003181	-	86	33.714	ENSPLAG00000015685	rabl2	78	33.714
ENSPLAG00000003181	-	90	35.638	ENSPLAG00000011697	rab23	96	35.500
ENSPLAG00000003181	-	58	31.092	ENSPLAG00000015887	-	63	31.092
ENSPLAG00000003181	-	79	44.304	ENSPLAG00000022260	rab6ba	76	44.304
ENSPLAG00000003181	-	90	31.606	ENSPLAG00000002398	rasl11b	78	31.606
ENSPLAG00000003181	-	88	37.989	ENSPLAG00000001065	-	86	37.989
ENSPLAG00000003181	-	90	56.425	ENSPLAG00000015592	-	88	56.425
ENSPLAG00000003181	-	86	45.349	ENSPLAG00000014563	rab4a	81	45.349
ENSPLAG00000003181	-	91	47.802	ENSPLAG00000021043	si:dkey-16l2.16	87	47.802
ENSPLAG00000003181	-	88	35.196	ENSPLAG00000003379	hrasb	94	35.196
ENSPLAG00000003181	-	83	44.242	ENSPLAG00000004551	-	77	44.242
ENSPLAG00000003181	-	73	45.695	ENSPLAG00000016172	-	63	45.695
ENSPLAG00000003181	-	90	43.784	ENSPLAG00000010104	rab18a	88	43.784
ENSPLAG00000003181	-	85	43.023	ENSPLAG00000005628	rab42a	79	43.023
ENSPLAG00000003181	-	96	41.146	ENSPLAG00000008004	rab25b	91	41.146
ENSPLAG00000003181	-	88	37.989	ENSPLAG00000002799	RAB7A	86	37.989
ENSPLAG00000003181	-	80	49.686	ENSPLAG00000001598	rab11bb	73	49.686
ENSPLAG00000003181	-	92	40.513	ENSPLAG00000005189	rab33a	85	40.513
ENSPLAG00000003181	-	84	46.429	ENSPLAG00000007986	rab11al	78	46.429
ENSPLAG00000003181	-	95	35.789	ENSPLAG00000018718	rab22a	97	35.789
ENSPLAG00000003181	-	81	33.140	ENSPLAG00000004043	rasl11a	67	33.140
ENSPLAG00000003181	-	81	38.272	ENSPLAG00000009352	KRAS	98	36.269
ENSPLAG00000003181	-	79	36.420	ENSPLAG00000019688	si:dkey-13a21.4	79	36.420
ENSPLAG00000003181	-	96	36.041	ENSPLAG00000009163	rras	96	36.041
ENSPLAG00000003181	-	88	55.429	ENSPLAG00000006354	rab15	82	55.429
ENSPLAG00000003181	-	89	100.000	ENSPLAG00000005832	RAB13	95	100.000
ENSPLAG00000003181	-	85	55.882	ENSPLAG00000023128	RAB15	81	55.882
ENSPLAG00000003181	-	78	40.000	ENSPLAG00000007015	rab9a	75	40.000
ENSPLAG00000003181	-	58	30.769	ENSPLAG00000001962	arl3	63	30.769
ENSPLAG00000003181	-	78	40.000	ENSPLAG00000022926	rab9a	79	40.000
ENSPLAG00000003181	-	83	44.848	ENSPLAG00000022515	-	77	44.848
ENSPLAG00000003181	-	79	44.304	ENSPLAG00000000376	rab41	75	44.304
ENSPLAG00000003181	-	97	40.206	ENSPLAG00000003558	rab25a	90	40.206
ENSPLAG00000003181	-	82	36.095	ENSPLAG00000002600	RAB29	79	36.095
ENSPLAG00000003181	-	84	48.214	ENSPLAG00000023374	rab2a	79	48.214
ENSPLAG00000003181	-	95	40.104	ENSPLAG00000017838	rab5aa	89	40.104
ENSPLAG00000003181	-	79	39.375	ENSPLAG00000022991	rab34a	57	39.375
ENSPLAG00000003181	-	78	33.544	ENSPLAG00000006115	-	75	33.544
ENSPLAG00000003181	-	95	44.737	ENSPLAG00000011175	rab11a	95	41.951
ENSPLAG00000003181	-	84	40.230	ENSPLAG00000011866	rab9b	77	40.230
ENSPLAG00000003181	-	85	45.349	ENSPLAG00000007237	RAB39B	81	45.349
ENSPLAG00000003181	-	94	41.489	ENSPLAG00000019570	rab6a	89	41.489
ENSPLAG00000003181	-	95	35.789	ENSPLAG00000017232	rab22a	97	35.789
ENSPLAG00000003181	-	77	36.364	ENSPLAG00000001529	rheb	84	36.364
ENSPLAG00000003181	-	80	49.057	ENSPLAG00000014243	rab11ba	73	49.057
ENSPLAG00000003181	-	80	33.750	ENSPLAG00000016748	RHEB	83	33.750
ENSPLAG00000003181	-	74	33.784	ENSPLAG00000019120	-	75	33.784
ENSPLAG00000003181	-	85	49.704	ENSPLAG00000015383	rab30	83	49.704
ENSPLAG00000003181	-	85	30.337	ENSPLAG00000008845	dnajc27	65	30.337
ENSPLAG00000003181	-	96	33.333	ENSPLAG00000015650	rhebl1	96	33.333
ENSPLAG00000003181	-	85	44.767	ENSPLAG00000018322	-	81	44.767
ENSPLAG00000003181	-	97	53.368	ENSPLAG00000018655	rab1ba	92	53.368
ENSPLAG00000003181	-	81	42.236	ENSPLAG00000004790	rab5c	73	42.236
ENSPLAG00000003181	-	81	37.423	ENSPLAG00000011855	si:ch73-116o1.2	94	35.204
ENSPLAG00000003181	-	80	42.683	ENSPLAG00000020627	zgc:101559	70	42.683

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000003181	-	100	93.500	ENSAPOG00000001040	-	100	93.500	Acanthochromis_polyacanthus
ENSPLAG00000003181	-	100	65.174	ENSACIG00000003157	-	100	65.174	Amphilophus_citrinellus
ENSPLAG00000003181	-	100	93.500	ENSAOCG00000015908	-	100	93.500	Amphiprion_ocellaris
ENSPLAG00000003181	-	100	93.500	ENSAPEG00000004121	-	100	93.500	Amphiprion_percula
ENSPLAG00000003181	-	100	90.500	ENSATEG00000023662	-	100	90.500	Anabas_testudineus
ENSPLAG00000003181	-	100	92.500	ENSACLG00000019643	-	100	92.500	Astatotilapia_calliptera
ENSPLAG00000003181	-	100	96.500	ENSCVAG00000022649	-	100	96.500	Cyprinodon_variegatus
ENSPLAG00000003181	-	86	73.256	ENSDARG00000103934	megf8	99	73.256	Danio_rerio
ENSPLAG00000003181	-	100	97.500	ENSGAFG00000014787	-	100	97.500	Gambusia_affinis
ENSPLAG00000003181	-	100	92.500	ENSHBUG00000003728	-	100	92.500	Haplochromis_burtoni
ENSPLAG00000003181	-	100	92.500	ENSMZEG00005015817	-	100	92.500	Maylandia_zebra
ENSPLAG00000003181	-	100	92.500	ENSMMOG00000003924	-	100	92.500	Mola_mola
ENSPLAG00000003181	-	100	93.500	ENSMALG00000020807	-	100	93.500	Monopterus_albus
ENSPLAG00000003181	-	54	90.741	ENSOPRG00000014416	-	100	90.741	Ochotona_princeps
ENSPLAG00000003181	-	100	88.000	ENSORLG00000025395	-	100	88.000	Oryzias_latipes
ENSPLAG00000003181	-	100	88.000	ENSORLG00020009535	-	100	88.000	Oryzias_latipes_hni
ENSPLAG00000003181	-	100	88.500	ENSORLG00015015518	-	100	88.500	Oryzias_latipes_hsok
ENSPLAG00000003181	-	100	86.567	ENSPKIG00000014528	-	100	86.567	Paramormyrops_kingsleyae
ENSPLAG00000003181	-	100	100.000	ENSPFOG00000014418	-	100	100.000	Poecilia_formosa
ENSPLAG00000003181	-	100	100.000	ENSPMEG00000022988	-	100	100.000	Poecilia_mexicana
ENSPLAG00000003181	-	100	100.000	ENSPMEG00000008020	-	100	100.000	Poecilia_mexicana
ENSPLAG00000003181	-	100	92.000	ENSPNYG00000004681	-	100	92.000	Pundamilia_nyererei
ENSPLAG00000003181	-	100	87.500	ENSSFOG00015021754	rab13	100	87.500	Scleropages_formosus
ENSPLAG00000003181	-	100	65.700	ENSSMAG00000002569	-	100	65.700	Scophthalmus_maximus
ENSPLAG00000003181	-	100	92.000	ENSSMAG00000016376	-	100	92.000	Scophthalmus_maximus
ENSPLAG00000003181	-	100	94.000	ENSSDUG00000006307	-	100	94.000	Seriola_dumerili
ENSPLAG00000003181	-	100	94.000	ENSSLDG00000015823	-	100	94.000	Seriola_lalandi_dorsalis
ENSPLAG00000003181	-	100	94.000	ENSSPAG00000022440	-	100	94.000	Stegastes_partitus
ENSPLAG00000003181	-	100	91.000	ENSTNIG00000018319	-	100	91.000	Tetraodon_nigroviridis
ENSPLAG00000003181	-	100	98.000	ENSXMAG00000016094	-	100	98.000	Xiphophorus_maculatus