EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000003198 (Gene tree)
Gene ID: 106963321
Gene Symbol: -
Alias: -
Full Name: polyadenylate-binding protein 3-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 4890 bases
Position: chrKQ546834.1:134592-139481
Accession: 106963321
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000020349	PABP	PF00658.18	5.3e-45	1	3
ENSPLAP00000020349	PABP	PF00658.18	5.3e-45	2	3
ENSPLAP00000020349	PABP	PF00658.18	5.3e-45	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000013758	-	3715	XM_015058171	ENSPLAP00000020349	216 (aa)	XP_014913657	UPI000443DB57

Gene Model

Click here to download ENSPLAG00000003198's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000003198's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000003198	-	99	79.439	ENSAPOG00000023881	-	100	79.439	Acanthochromis_polyacanthus
ENSPLAG00000003198	-	99	78.972	ENSAOCG00000019884	-	100	78.972	Amphiprion_ocellaris
ENSPLAG00000003198	-	99	78.972	ENSAPEG00000020987	-	100	78.972	Amphiprion_percula
ENSPLAG00000003198	-	98	78.505	ENSATEG00000013831	-	99	78.505	Anabas_testudineus
ENSPLAG00000003198	-	99	78.505	ENSACLG00000027916	-	99	78.505	Astatotilapia_calliptera
ENSPLAG00000003198	-	99	57.870	ENSAMXG00000041484	-	95	57.870	Astyanax_mexicanus
ENSPLAG00000003198	-	91	72.727	ENSCSEG00000001317	-	100	72.727	Cynoglossus_semilaevis
ENSPLAG00000003198	-	100	85.185	ENSCVAG00000000578	-	100	85.185	Cyprinodon_variegatus
ENSPLAG00000003198	-	99	66.047	ENSELUG00000001731	-	80	66.047	Esox_lucius
ENSPLAG00000003198	-	100	85.648	ENSFHEG00000007741	-	100	85.648	Fundulus_heteroclitus
ENSPLAG00000003198	-	99	84.239	ENSGAFG00000012983	-	67	84.239	Gambusia_affinis
ENSPLAG00000003198	-	98	76.777	ENSHBUG00000000185	-	59	76.777	Haplochromis_burtoni
ENSPLAG00000003198	-	99	64.815	ENSHCOG00000003117	-	100	64.815	Hippocampus_comes
ENSPLAG00000003198	-	99	81.690	ENSKMAG00000011397	-	99	81.690	Kryptolebias_marmoratus
ENSPLAG00000003198	-	99	78.972	ENSLBEG00000027847	-	96	78.972	Labrus_bergylta
ENSPLAG00000003198	-	92	59.091	ENSLOCG00000003085	-	99	56.962	Lepisosteus_oculatus
ENSPLAG00000003198	-	99	80.374	ENSMAMG00000017628	-	100	80.374	Mastacembelus_armatus
ENSPLAG00000003198	-	95	73.224	ENSMMOG00000004490	-	89	73.224	Mola_mola
ENSPLAG00000003198	-	98	80.095	ENSMALG00000004586	-	99	80.095	Monopterus_albus
ENSPLAG00000003198	-	96	78.771	ENSNBRG00000006752	-	74	78.771	Neolamprologus_brichardi
ENSPLAG00000003198	-	93	60.000	ENSPKIG00000005307	-	93	60.377	Paramormyrops_kingsleyae
ENSPLAG00000003198	-	98	63.243	ENSPMGG00000004590	-	98	63.243	Periophthalmus_magnuspinnatus
ENSPLAG00000003198	-	99	100.000	ENSPFOG00000023453	-	99	100.000	Poecilia_formosa
ENSPLAG00000003198	-	94	89.444	ENSPMEG00000022008	-	83	89.444	Poecilia_mexicana
ENSPLAG00000003198	-	100	90.278	ENSPREG00000001981	-	99	90.278	Poecilia_reticulata
ENSPLAG00000003198	-	94	77.976	ENSPNYG00000004740	-	86	77.976	Pundamilia_nyererei
ENSPLAG00000003198	-	85	45.745	ENSPNAG00000018692	-	73	45.745	Pygocentrus_nattereri
ENSPLAG00000003198	-	98	61.792	ENSSFOG00015001322	-	95	61.792	Scleropages_formosus
ENSPLAG00000003198	-	97	78.095	ENSSMAG00000008778	-	98	78.095	Scophthalmus_maximus
ENSPLAG00000003198	-	100	80.556	ENSSDUG00000015116	-	99	81.308	Seriola_dumerili
ENSPLAG00000003198	-	99	80.841	ENSSLDG00000000425	-	99	80.841	Seriola_lalandi_dorsalis
ENSPLAG00000003198	-	99	81.308	ENSSPAG00000015141	-	100	81.308	Stegastes_partitus
ENSPLAG00000003198	-	100	72.350	ENSTRUG00000021899	-	99	72.350	Takifugu_rubripes
ENSPLAG00000003198	-	99	65.421	ENSTNIG00000002576	-	99	65.421	Tetraodon_nigroviridis
ENSPLAG00000003198	-	100	74.537	ENSXCOG00000001548	-	98	74.537	Xiphophorus_couchianus
ENSPLAG00000003198	-	100	94.907	ENSXMAG00000021863	-	100	94.907	Xiphophorus_maculatus