EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000003272 (Gene tree)
Gene ID: 106950000
Gene Symbol: dkc1
Alias: -
Full Name: dyskerin pseudouridine synthase 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 7887 bases
Position: chrKQ545688.1:347442-355328
Accession: 106950000
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000020392	TruB_N	PF01509.18	9e-20	1	1
ENSPLAP00000020392	PUA	PF01472.20	5.8e-17	1	1
ENSPLAP00000020392	DKCLD	PF08068.12	4.8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000013647	-	2099	XM_015036591	ENSPLAP00000020392	553 (aa)	XP_014892077	-

Gene Model

Click here to download ENSPLAG00000003272's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000003272's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000003272	dkc1	72	86.111	ENSG00000130826	DKC1	99	87.805	Homo_sapiens
ENSPLAG00000003272	dkc1	88	87.959	ENSAPOG00000007799	dkc1	89	90.044	Acanthochromis_polyacanthus
ENSPLAG00000003272	dkc1	77	81.693	ENSAMEG00000002776	DKC1	86	81.693	Ailuropoda_melanoleuca
ENSPLAG00000003272	dkc1	84	88.387	ENSACIG00000022614	dkc1	87	90.278	Amphilophus_citrinellus
ENSPLAG00000003272	dkc1	88	87.195	ENSAOCG00000013159	dkc1	88	90.741	Amphiprion_ocellaris
ENSPLAG00000003272	dkc1	88	87.347	ENSAPEG00000002284	dkc1	88	90.741	Amphiprion_percula
ENSPLAG00000003272	dkc1	79	87.810	ENSATEG00000013682	dkc1	86	87.982	Anabas_testudineus
ENSPLAG00000003272	dkc1	77	82.151	ENSACAG00000015600	DKC1	75	82.151	Anolis_carolinensis
ENSPLAG00000003272	dkc1	77	80.952	ENSANAG00000022732	DKC1	86	80.952	Aotus_nancymaae
ENSPLAG00000003272	dkc1	84	87.716	ENSACLG00000015605	dkc1	88	89.171	Astatotilapia_calliptera
ENSPLAG00000003272	dkc1	81	85.275	ENSAMXG00000017108	dkc1	85	87.037	Astyanax_mexicanus
ENSPLAG00000003272	dkc1	77	81.050	ENSBTAG00000013045	DKC1	88	80.180	Bos_taurus
ENSPLAG00000003272	dkc1	74	64.619	WBGene00010478	K01G5.5	97	61.432	Caenorhabditis_elegans
ENSPLAG00000003272	dkc1	77	81.136	ENSCJAG00000004210	DKC1	85	81.136	Callithrix_jacchus
ENSPLAG00000003272	dkc1	80	79.195	ENSCAFG00000019620	-	80	83.738	Canis_familiaris
ENSPLAG00000003272	dkc1	80	71.493	ENSCAFG00000009311	-	95	67.629	Canis_familiaris
ENSPLAG00000003272	dkc1	76	71.560	ENSCAFG00020009379	-	83	71.560	Canis_lupus_dingo
ENSPLAG00000003272	dkc1	80	79.195	ENSCAFG00020008918	-	80	83.738	Canis_lupus_dingo
ENSPLAG00000003272	dkc1	77	81.050	ENSCHIG00000017392	DKC1	88	80.180	Capra_hircus
ENSPLAG00000003272	dkc1	77	79.157	ENSTSYG00000007681	DKC1	89	77.516	Carlito_syrichta
ENSPLAG00000003272	dkc1	71	82.064	ENSCAPG00000003342	DKC1	91	82.836	Cavia_aperea
ENSPLAG00000003272	dkc1	76	81.922	ENSCPOG00000008825	DKC1	85	81.922	Cavia_porcellus
ENSPLAG00000003272	dkc1	84	68.908	ENSCCAG00000027418	DKC1	84	71.429	Cebus_capucinus
ENSPLAG00000003272	dkc1	77	80.499	ENSCATG00000033602	DKC1	86	80.499	Cercocebus_atys
ENSPLAG00000003272	dkc1	77	80.866	ENSCLAG00000000720	DKC1	88	80.000	Chinchilla_lanigera
ENSPLAG00000003272	dkc1	77	80.726	ENSCSAG00000006706	DKC1	86	80.726	Chlorocebus_sabaeus
ENSPLAG00000003272	dkc1	77	81.524	ENSCPBG00000005858	DKC1	86	85.222	Chrysemys_picta_bellii
ENSPLAG00000003272	dkc1	72	79.699	ENSCING00000004599	-	83	75.917	Ciona_intestinalis
ENSPLAG00000003272	dkc1	71	80.307	ENSCSAVG00000010047	-	88	79.241	Ciona_savignyi
ENSPLAG00000003272	dkc1	77	80.726	ENSCANG00000027987	DKC1	86	80.726	Colobus_angolensis_palliatus
ENSPLAG00000003272	dkc1	77	80.952	ENSCGRG00001014574	-	86	80.952	Cricetulus_griseus_chok1gshd
ENSPLAG00000003272	dkc1	69	65.885	ENSCGRG00001016789	-	79	66.577	Cricetulus_griseus_chok1gshd
ENSPLAG00000003272	dkc1	89	55.193	ENSCGRG00000014809	-	87	59.028	Cricetulus_griseus_crigri
ENSPLAG00000003272	dkc1	77	80.952	ENSCGRG00000016075	-	86	80.952	Cricetulus_griseus_crigri
ENSPLAG00000003272	dkc1	84	86.724	ENSCSEG00000012633	dkc1	90	87.991	Cynoglossus_semilaevis
ENSPLAG00000003272	dkc1	88	93.196	ENSCVAG00000010155	dkc1	94	92.324	Cyprinodon_variegatus
ENSPLAG00000003272	dkc1	78	89.815	ENSDARG00000016484	dkc1	87	88.662	Danio_rerio
ENSPLAG00000003272	dkc1	77	80.726	ENSDNOG00000004218	DKC1	86	80.726	Dasypus_novemcinctus
ENSPLAG00000003272	dkc1	53	69.333	ENSDORG00000013566	-	91	71.480	Dipodomys_ordii
ENSPLAG00000003272	dkc1	77	68.037	FBgn0259937	Nop60B	88	68.000	Drosophila_melanogaster
ENSPLAG00000003272	dkc1	77	78.458	ENSETEG00000016095	DKC1	90	78.458	Echinops_telfairi
ENSPLAG00000003272	dkc1	59	76.900	ENSEBUG00000015962	dkc1	98	81.100	Eptatretus_burgeri
ENSPLAG00000003272	dkc1	77	78.571	ENSEASG00005007484	DKC1	86	78.571	Equus_asinus_asinus
ENSPLAG00000003272	dkc1	77	78.571	ENSECAG00000023524	DKC1	86	78.571	Equus_caballus
ENSPLAG00000003272	dkc1	71	86.445	ENSEEUG00000003323	DKC1	99	81.840	Erinaceus_europaeus
ENSPLAG00000003272	dkc1	81	87.965	ENSELUG00000014538	dkc1	90	87.965	Esox_lucius
ENSPLAG00000003272	dkc1	76	80.920	ENSFCAG00000006577	DKC1	86	80.920	Felis_catus
ENSPLAG00000003272	dkc1	76	81.963	ENSFALG00000011496	DKC1	86	80.889	Ficedula_albicollis
ENSPLAG00000003272	dkc1	85	76.033	ENSFDAG00000002516	DKC1	94	76.082	Fukomys_damarensis
ENSPLAG00000003272	dkc1	81	94.855	ENSFHEG00000004627	dkc1	90	94.667	Fundulus_heteroclitus
ENSPLAG00000003272	dkc1	71	89.514	ENSGMOG00000017277	dkc1	100	89.514	Gadus_morhua
ENSPLAG00000003272	dkc1	76	83.256	ENSGALG00000005054	DKC1	86	81.348	Gallus_gallus
ENSPLAG00000003272	dkc1	100	96.203	ENSGAFG00000011486	dkc1	95	96.203	Gambusia_affinis
ENSPLAG00000003272	dkc1	72	93.467	ENSGACG00000004373	dkc1	96	94.225	Gasterosteus_aculeatus
ENSPLAG00000003272	dkc1	77	82.217	ENSGAGG00000011330	DKC1	84	82.448	Gopherus_agassizii
ENSPLAG00000003272	dkc1	77	80.952	ENSGGOG00000001045	DKC1	86	80.952	Gorilla_gorilla
ENSPLAG00000003272	dkc1	86	90.188	ENSHBUG00000012436	dkc1	90	90.487	Haplochromis_burtoni
ENSPLAG00000003272	dkc1	72	85.500	ENSHGLG00000000649	DKC1	85	80.135	Heterocephalus_glaber_female
ENSPLAG00000003272	dkc1	72	85.500	ENSHGLG00100001153	DKC1	86	80.135	Heterocephalus_glaber_male
ENSPLAG00000003272	dkc1	86	86.515	ENSHCOG00000021099	dkc1	88	88.839	Hippocampus_comes
ENSPLAG00000003272	dkc1	81	85.120	ENSIPUG00000010309	dkc1	85	85.973	Ictalurus_punctatus
ENSPLAG00000003272	dkc1	77	80.090	ENSSTOG00000001074	-	91	80.090	Ictidomys_tridecemlineatus
ENSPLAG00000003272	dkc1	77	69.300	ENSSTOG00000011904	-	82	69.300	Ictidomys_tridecemlineatus
ENSPLAG00000003272	dkc1	77	74.014	ENSSTOG00000020149	-	85	74.014	Ictidomys_tridecemlineatus
ENSPLAG00000003272	dkc1	50	71.942	ENSJJAG00000010086	-	92	71.942	Jaculus_jaculus
ENSPLAG00000003272	dkc1	81	90.179	ENSKMAG00000008010	dkc1	90	89.800	Kryptolebias_marmoratus
ENSPLAG00000003272	dkc1	82	90.330	ENSLBEG00000019122	dkc1	93	88.962	Labrus_bergylta
ENSPLAG00000003272	dkc1	78	81.336	ENSLACG00000014025	DKC1	90	86.364	Latimeria_chalumnae
ENSPLAG00000003272	dkc1	81	86.842	ENSLOCG00000013713	dkc1	88	89.387	Lepisosteus_oculatus
ENSPLAG00000003272	dkc1	77	80.952	ENSLAFG00000000221	DKC1	87	80.089	Loxodonta_africana
ENSPLAG00000003272	dkc1	77	80.769	ENSMFAG00000032398	DKC1	80	74.096	Macaca_fascicularis
ENSPLAG00000003272	dkc1	77	80.726	ENSMMUG00000005768	DKC1	86	80.726	Macaca_mulatta
ENSPLAG00000003272	dkc1	77	80.726	ENSMNEG00000034503	DKC1	86	80.726	Macaca_nemestrina
ENSPLAG00000003272	dkc1	77	80.726	ENSMLEG00000034422	DKC1	86	80.726	Mandrillus_leucophaeus
ENSPLAG00000003272	dkc1	75	93.932	ENSMAMG00000005427	dkc1	91	94.568	Mastacembelus_armatus
ENSPLAG00000003272	dkc1	86	90.397	ENSMZEG00005014503	dkc1	90	90.708	Maylandia_zebra
ENSPLAG00000003272	dkc1	69	85.897	ENSMGAG00000009238	DKC1	89	83.212	Meleagris_gallopavo
ENSPLAG00000003272	dkc1	50	71.480	ENSMAUG00000016454	-	91	71.480	Mesocricetus_auratus
ENSPLAG00000003272	dkc1	71	73.350	ENSMICG00000002818	-	99	76.099	Microcebus_murinus
ENSPLAG00000003272	dkc1	72	84.750	ENSMICG00000038751	-	80	84.750	Microcebus_murinus
ENSPLAG00000003272	dkc1	50	69.314	ENSMOCG00000001169	-	91	69.314	Microtus_ochrogaster
ENSPLAG00000003272	dkc1	76	91.190	ENSMMOG00000020348	dkc1	88	91.646	Mola_mola
ENSPLAG00000003272	dkc1	72	85.714	ENSMODG00000009243	DKC1	69	86.146	Monodelphis_domestica
ENSPLAG00000003272	dkc1	79	91.364	ENSMALG00000009454	dkc1	85	91.244	Monopterus_albus
ENSPLAG00000003272	dkc1	78	69.196	MGP_CAROLIEiJ_G0033191	Dkc1	86	81.102	Mus_caroli
ENSPLAG00000003272	dkc1	77	80.638	ENSMUSG00000031403	Dkc1	86	80.638	Mus_musculus
ENSPLAG00000003272	dkc1	76	81.193	MGP_PahariEiJ_G0031735	Dkc1	85	81.193	Mus_pahari
ENSPLAG00000003272	dkc1	77	80.638	MGP_SPRETEiJ_G0034351	Dkc1	86	80.638	Mus_spretus
ENSPLAG00000003272	dkc1	83	78.043	ENSMPUG00000016136	DKC1	84	77.778	Mustela_putorius_furo
ENSPLAG00000003272	dkc1	81	75.803	ENSMLUG00000011918	DKC1	89	75.803	Myotis_lucifugus
ENSPLAG00000003272	dkc1	50	71.841	ENSNGAG00000015724	-	92	71.841	Nannospalax_galili
ENSPLAG00000003272	dkc1	72	95.960	ENSNBRG00000005638	dkc1	80	95.960	Neolamprologus_brichardi
ENSPLAG00000003272	dkc1	77	80.726	ENSNLEG00000014323	DKC1	86	80.726	Nomascus_leucogenys
ENSPLAG00000003272	dkc1	73	81.931	ENSMEUG00000001066	DKC1	96	76.484	Notamacropus_eugenii
ENSPLAG00000003272	dkc1	63	79.310	ENSOPRG00000005248	DKC1	69	79.310	Ochotona_princeps
ENSPLAG00000003272	dkc1	50	71.480	ENSODEG00000000549	-	91	71.480	Octodon_degus
ENSPLAG00000003272	dkc1	72	87.250	ENSODEG00000011816	-	86	82.609	Octodon_degus
ENSPLAG00000003272	dkc1	84	90.578	ENSONIG00000013889	dkc1	86	92.379	Oreochromis_niloticus
ENSPLAG00000003272	dkc1	51	63.455	ENSOANG00000022295	-	86	62.783	Ornithorhynchus_anatinus
ENSPLAG00000003272	dkc1	76	83.683	ENSOANG00000008713	-	90	82.798	Ornithorhynchus_anatinus
ENSPLAG00000003272	dkc1	77	80.000	ENSOCUG00000012646	DKC1	86	80.000	Oryctolagus_cuniculus
ENSPLAG00000003272	dkc1	82	86.652	ENSORLG00000018748	dkc1	85	87.760	Oryzias_latipes
ENSPLAG00000003272	dkc1	87	82.922	ENSOMEG00000005786	dkc1	82	90.377	Oryzias_melastigma
ENSPLAG00000003272	dkc1	77	78.714	ENSOGAG00000003399	DKC1	86	78.714	Otolemur_garnettii
ENSPLAG00000003272	dkc1	77	81.279	ENSOARG00000003047	DKC1	88	80.405	Ovis_aries
ENSPLAG00000003272	dkc1	77	80.682	ENSPPAG00000023820	DKC1	86	81.179	Pan_paniscus
ENSPLAG00000003272	dkc1	76	80.920	ENSPPRG00000009104	DKC1	86	80.920	Panthera_pardus
ENSPLAG00000003272	dkc1	76	82.979	ENSPTIG00000017469	DKC1	85	82.979	Panthera_tigris_altaica
ENSPLAG00000003272	dkc1	77	80.952	ENSPTRG00000043416	-	80	74.494	Pan_troglodytes
ENSPLAG00000003272	dkc1	77	80.952	ENSPTRG00000022449	DKC1	86	80.952	Pan_troglodytes
ENSPLAG00000003272	dkc1	77	80.726	ENSPANG00000011978	DKC1	86	80.726	Papio_anubis
ENSPLAG00000003272	dkc1	78	86.636	ENSPKIG00000008443	dkc1	92	86.239	Paramormyrops_kingsleyae
ENSPLAG00000003272	dkc1	65	88.827	ENSPSIG00000013765	DKC1	86	88.827	Pelodiscus_sinensis
ENSPLAG00000003272	dkc1	84	78.261	ENSPMGG00000004097	dkc1	73	87.626	Periophthalmus_magnuspinnatus
ENSPLAG00000003272	dkc1	59	85.135	ENSPEMG00000013348	Dkc1	83	84.916	Peromyscus_maniculatus_bairdii
ENSPLAG00000003272	dkc1	72	86.466	ENSPCIG00000016706	DKC1	67	86.466	Phascolarctos_cinereus
ENSPLAG00000003272	dkc1	90	100.000	ENSPFOG00000018653	dkc1	100	100.000	Poecilia_formosa
ENSPLAG00000003272	dkc1	90	99.400	ENSPMEG00000010413	dkc1	100	99.400	Poecilia_mexicana
ENSPLAG00000003272	dkc1	100	98.192	ENSPREG00000004100	dkc1	100	98.192	Poecilia_reticulata
ENSPLAG00000003272	dkc1	77	80.952	ENSPPYG00000020892	DKC1	86	80.952	Pongo_abelii
ENSPLAG00000003272	dkc1	67	85.561	ENSPCAG00000015034	DKC1	73	85.561	Procavia_capensis
ENSPLAG00000003272	dkc1	77	80.045	ENSPCOG00000026874	DKC1	86	80.045	Propithecus_coquereli
ENSPLAG00000003272	dkc1	77	81.439	ENSPVAG00000009222	DKC1	86	81.439	Pteropus_vampyrus
ENSPLAG00000003272	dkc1	83	87.712	ENSPNYG00000020063	dkc1	88	88.764	Pundamilia_nyererei
ENSPLAG00000003272	dkc1	78	86.143	ENSPNAG00000005780	dkc1	86	86.143	Pygocentrus_nattereri
ENSPLAG00000003272	dkc1	80	76.344	ENSRNOG00000055562	Dkc1	86	78.458	Rattus_norvegicus
ENSPLAG00000003272	dkc1	77	80.726	ENSRBIG00000028457	DKC1	79	74.089	Rhinopithecus_bieti
ENSPLAG00000003272	dkc1	77	80.726	ENSRROG00000044780	DKC1	86	80.726	Rhinopithecus_roxellana
ENSPLAG00000003272	dkc1	71	70.127	YLR175W	-	85	67.143	Saccharomyces_cerevisiae
ENSPLAG00000003272	dkc1	77	80.952	ENSSBOG00000033746	DKC1	85	80.952	Saimiri_boliviensis_boliviensis
ENSPLAG00000003272	dkc1	76	81.967	ENSSHAG00000002463	DKC1	92	80.876	Sarcophilus_harrisii
ENSPLAG00000003272	dkc1	81	85.088	ENSSFOG00015009585	dkc1	85	86.667	Scleropages_formosus
ENSPLAG00000003272	dkc1	81	87.665	ENSSMAG00000002552	dkc1	89	87.665	Scophthalmus_maximus
ENSPLAG00000003272	dkc1	84	89.032	ENSSDUG00000009963	dkc1	90	90.287	Seriola_dumerili
ENSPLAG00000003272	dkc1	84	87.716	ENSSLDG00000019342	dkc1	87	90.300	Seriola_lalandi_dorsalis
ENSPLAG00000003272	dkc1	77	75.854	ENSSARG00000001822	DKC1	87	76.659	Sorex_araneus
ENSPLAG00000003272	dkc1	75	83.373	ENSSPUG00000018907	DKC1	87	78.947	Sphenodon_punctatus
ENSPLAG00000003272	dkc1	84	89.079	ENSSPAG00000002585	dkc1	82	90.762	Stegastes_partitus
ENSPLAG00000003272	dkc1	72	85.894	ENSSSCG00000012823	DKC1	88	81.754	Sus_scrofa
ENSPLAG00000003272	dkc1	80	78.166	ENSTGUG00000006781	DKC1	99	78.821	Taeniopygia_guttata
ENSPLAG00000003272	dkc1	81	88.444	ENSTRUG00000004413	dkc1	90	88.444	Takifugu_rubripes
ENSPLAG00000003272	dkc1	81	70.410	ENSTNIG00000002582	dkc1	91	70.323	Tetraodon_nigroviridis
ENSPLAG00000003272	dkc1	52	80.936	ENSTBEG00000011262	DKC1	85	80.259	Tupaia_belangeri
ENSPLAG00000003272	dkc1	50	85.921	ENSTTRG00000008089	DKC1	55	85.921	Tursiops_truncatus
ENSPLAG00000003272	dkc1	85	76.858	ENSUAMG00000022721	DKC1	89	82.227	Ursus_americanus
ENSPLAG00000003272	dkc1	85	76.433	ENSUMAG00000016899	DKC1	96	84.518	Ursus_maritimus
ENSPLAG00000003272	dkc1	80	78.194	ENSVVUG00000020734	-	72	82.339	Vulpes_vulpes
ENSPLAG00000003272	dkc1	81	65.111	ENSVVUG00000021671	-	76	69.830	Vulpes_vulpes
ENSPLAG00000003272	dkc1	88	79.430	ENSXETG00000032517	DKC1	91	81.064	Xenopus_tropicalis
ENSPLAG00000003272	dkc1	85	94.456	ENSXCOG00000005498	dkc1	93	95.632	Xiphophorus_couchianus
ENSPLAG00000003272	dkc1	90	97.600	ENSXMAG00000004919	dkc1	100	97.600	Xiphophorus_maculatus