EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000003363 (Gene tree)
Gene ID: 106936902
Gene Symbol: smarca5
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 11114 bases
Position: chrKQ545393.1:52705-63818
Accession: 106936902
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000002122	ResIII	PF04851.15	3.7e-11	1	1
ENSPLAP00000002122	DEAD	PF00270.29	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000013569	-	3382	XM_015018156	ENSPLAP00000002122	1035 (aa)	XP_014873642	UPI0004440E49

Gene Model

Click here to download ENSPLAG00000003363's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000003363's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000003363	smarca5	52	41.486	ENSPLAG00000015145	chd1l	61	41.441
ENSPLAG00000003363	smarca5	51	42.470	ENSPLAG00000006504	hells	85	42.470

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000003363	smarca5	95	82.828	ENSG00000102038	SMARCA1	92	83.742	Homo_sapiens
ENSPLAG00000003363	smarca5	100	97.394	ENSAPOG00000016035	smarca5	100	97.394	Acanthochromis_polyacanthus
ENSPLAG00000003363	smarca5	95	82.036	ENSAMEG00000015218	SMARCA1	92	82.828	Ailuropoda_melanoleuca
ENSPLAG00000003363	smarca5	87	98.113	ENSACIG00000016982	smarca5	100	98.113	Amphilophus_citrinellus
ENSPLAG00000003363	smarca5	100	97.394	ENSAOCG00000015578	smarca5	100	97.394	Amphiprion_ocellaris
ENSPLAG00000003363	smarca5	100	97.394	ENSAPEG00000011117	smarca5	100	97.394	Amphiprion_percula
ENSPLAG00000003363	smarca5	100	97.391	ENSATEG00000012894	smarca5	100	97.391	Anabas_testudineus
ENSPLAG00000003363	smarca5	95	83.910	ENSAPLG00000013149	SMARCA1	99	84.151	Anas_platyrhynchos
ENSPLAG00000003363	smarca5	98	82.059	ENSACAG00000011376	SMARCA1	93	84.765	Anolis_carolinensis
ENSPLAG00000003363	smarca5	95	78.182	ENSANAG00000023098	SMARCA1	92	79.039	Aotus_nancymaae
ENSPLAG00000003363	smarca5	100	97.297	ENSACLG00000025356	smarca5	100	97.297	Astatotilapia_calliptera
ENSPLAG00000003363	smarca5	100	90.778	ENSAMXG00000005709	smarca5	100	90.453	Astyanax_mexicanus
ENSPLAG00000003363	smarca5	90	84.533	ENSAMXG00000011227	smarca1	99	85.525	Astyanax_mexicanus
ENSPLAG00000003363	smarca5	95	83.180	ENSBTAG00000002292	SMARCA1	90	83.701	Bos_taurus
ENSPLAG00000003363	smarca5	96	62.402	WBGene00002169	isw-1	95	63.674	Caenorhabditis_elegans
ENSPLAG00000003363	smarca5	95	83.503	ENSCJAG00000002868	SMARCA1	92	83.742	Callithrix_jacchus
ENSPLAG00000003363	smarca5	95	73.684	ENSCAFG00000018673	SMARCA1	99	75.410	Canis_familiaris
ENSPLAG00000003363	smarca5	95	83.030	ENSCAFG00020001751	SMARCA1	92	83.845	Canis_lupus_dingo
ENSPLAG00000003363	smarca5	95	82.877	ENSCHIG00000009837	SMARCA1	92	83.436	Capra_hircus
ENSPLAG00000003363	smarca5	95	83.030	ENSTSYG00000004240	SMARCA1	94	84.730	Carlito_syrichta
ENSPLAG00000003363	smarca5	95	81.426	ENSCPOG00000013601	SMARCA1	93	82.215	Cavia_porcellus
ENSPLAG00000003363	smarca5	95	80.101	ENSCCAG00000030817	SMARCA1	92	80.982	Cebus_capucinus
ENSPLAG00000003363	smarca5	93	83.851	ENSCATG00000015921	SMARCA1	90	84.984	Cercocebus_atys
ENSPLAG00000003363	smarca5	95	82.121	ENSCLAG00000002171	SMARCA1	92	82.924	Chinchilla_lanigera
ENSPLAG00000003363	smarca5	95	82.828	ENSCSAG00000008460	SMARCA1	92	83.742	Chlorocebus_sabaeus
ENSPLAG00000003363	smarca5	95	83.891	ENSCPBG00000001146	SMARCA1	92	84.458	Chrysemys_picta_bellii
ENSPLAG00000003363	smarca5	96	73.930	ENSCING00000004110	swi/snf	97	75.306	Ciona_intestinalis
ENSPLAG00000003363	smarca5	96	73.465	ENSCSAVG00000004620	-	99	75.839	Ciona_savignyi
ENSPLAG00000003363	smarca5	95	82.929	ENSCANG00000007183	SMARCA1	92	83.845	Colobus_angolensis_palliatus
ENSPLAG00000003363	smarca5	95	81.717	ENSCGRG00001010776	Smarca1	92	82.515	Cricetulus_griseus_chok1gshd
ENSPLAG00000003363	smarca5	95	81.256	ENSCGRG00000015301	Smarca1	94	83.051	Cricetulus_griseus_crigri
ENSPLAG00000003363	smarca5	100	96.232	ENSCSEG00000000328	smarca5	100	96.232	Cynoglossus_semilaevis
ENSPLAG00000003363	smarca5	100	98.841	ENSCVAG00000008668	smarca5	100	98.841	Cyprinodon_variegatus
ENSPLAG00000003363	smarca5	94	82.683	ENSDARG00000012776	smarca1	96	82.849	Danio_rerio
ENSPLAG00000003363	smarca5	100	90.944	ENSDARG00000052348	smarca5	100	90.444	Danio_rerio
ENSPLAG00000003363	smarca5	93	83.644	ENSDNOG00000004315	SMARCA1	91	84.665	Dasypus_novemcinctus
ENSPLAG00000003363	smarca5	97	81.157	ENSDORG00000009270	Smarca1	90	84.665	Dipodomys_ordii
ENSPLAG00000003363	smarca5	96	72.976	FBgn0011604	Iswi	97	74.200	Drosophila_melanogaster
ENSPLAG00000003363	smarca5	78	81.818	ENSETEG00000017426	SMARCA1	83	81.818	Echinops_telfairi
ENSPLAG00000003363	smarca5	97	81.052	ENSEBUG00000001239	smarca5	96	82.734	Eptatretus_burgeri
ENSPLAG00000003363	smarca5	95	79.150	ENSEASG00005008218	SMARCA1	99	79.776	Equus_asinus_asinus
ENSPLAG00000003363	smarca5	95	82.929	ENSECAG00000012106	SMARCA1	92	83.742	Equus_caballus
ENSPLAG00000003363	smarca5	77	84.437	ENSEEUG00000014927	SMARCA1	80	84.437	Erinaceus_europaeus
ENSPLAG00000003363	smarca5	94	84.324	ENSELUG00000010515	smarca1	95	85.176	Esox_lucius
ENSPLAG00000003363	smarca5	95	82.929	ENSFCAG00000018496	SMARCA1	92	83.742	Felis_catus
ENSPLAG00000003363	smarca5	88	85.011	ENSFALG00000000209	SMARCA1	98	85.011	Ficedula_albicollis
ENSPLAG00000003363	smarca5	93	82.311	ENSFDAG00000009818	SMARCA1	93	83.281	Fukomys_damarensis
ENSPLAG00000003363	smarca5	100	97.419	ENSFHEG00000007687	smarca5	100	97.419	Fundulus_heteroclitus
ENSPLAG00000003363	smarca5	96	82.000	ENSGALG00000008431	SMARCA1	94	85.310	Gallus_gallus
ENSPLAG00000003363	smarca5	100	99.710	ENSGAFG00000017731	smarca5	100	99.710	Gambusia_affinis
ENSPLAG00000003363	smarca5	94	84.465	ENSGAGG00000023575	SMARCA1	99	84.465	Gopherus_agassizii
ENSPLAG00000003363	smarca5	70	96.000	ENSGGOG00000012841	-	91	80.029	Gorilla_gorilla
ENSPLAG00000003363	smarca5	95	82.020	ENSHGLG00000003080	SMARCA1	92	82.822	Heterocephalus_glaber_female
ENSPLAG00000003363	smarca5	95	81.526	ENSHGLG00100001102	SMARCA1	98	82.317	Heterocephalus_glaber_male
ENSPLAG00000003363	smarca5	100	96.236	ENSHCOG00000005458	smarca5	100	96.236	Hippocampus_comes
ENSPLAG00000003363	smarca5	100	90.251	ENSIPUG00000005229	SMARCA5	96	94.353	Ictalurus_punctatus
ENSPLAG00000003363	smarca5	96	82.522	ENSIPUG00000016905	Smarca1	99	84.426	Ictalurus_punctatus
ENSPLAG00000003363	smarca5	95	82.828	ENSSTOG00000014524	SMARCA1	95	83.316	Ictidomys_tridecemlineatus
ENSPLAG00000003363	smarca5	95	81.508	ENSJJAG00000002593	Smarca1	93	82.299	Jaculus_jaculus
ENSPLAG00000003363	smarca5	100	98.164	ENSKMAG00000003777	smarca5	100	98.164	Kryptolebias_marmoratus
ENSPLAG00000003363	smarca5	94	95.701	ENSLBEG00000013295	SMARCA1	100	97.342	Labrus_bergylta
ENSPLAG00000003363	smarca5	100	95.652	ENSLBEG00000018112	smarca5	100	95.459	Labrus_bergylta
ENSPLAG00000003363	smarca5	94	85.361	ENSLACG00000016697	SMARCA1	95	85.361	Latimeria_chalumnae
ENSPLAG00000003363	smarca5	94	85.816	ENSLOCG00000014591	smarca1	95	85.977	Lepisosteus_oculatus
ENSPLAG00000003363	smarca5	95	81.727	ENSLAFG00000000896	SMARCA1	98	82.520	Loxodonta_africana
ENSPLAG00000003363	smarca5	95	82.828	ENSMFAG00000002117	SMARCA1	93	84.803	Macaca_fascicularis
ENSPLAG00000003363	smarca5	93	83.851	ENSMMUG00000008818	SMARCA1	97	84.771	Macaca_mulatta
ENSPLAG00000003363	smarca5	93	83.851	ENSMNEG00000041768	SMARCA1	93	84.803	Macaca_nemestrina
ENSPLAG00000003363	smarca5	95	82.828	ENSMLEG00000043198	SMARCA1	92	83.742	Mandrillus_leucophaeus
ENSPLAG00000003363	smarca5	100	97.209	ENSMAMG00000014294	smarca5	100	97.209	Mastacembelus_armatus
ENSPLAG00000003363	smarca5	100	97.297	ENSMZEG00005009369	smarca5	100	97.297	Maylandia_zebra
ENSPLAG00000003363	smarca5	95	82.897	ENSMGAG00000007042	SMARCA1	97	83.131	Meleagris_gallopavo
ENSPLAG00000003363	smarca5	93	82.183	ENSMAUG00000008133	Smarca1	90	83.157	Mesocricetus_auratus
ENSPLAG00000003363	smarca5	95	83.232	ENSMICG00000015768	SMARCA1	92	84.049	Microcebus_murinus
ENSPLAG00000003363	smarca5	95	81.106	ENSMOCG00000009464	Smarca1	92	81.892	Microtus_ochrogaster
ENSPLAG00000003363	smarca5	96	96.073	ENSMMOG00000005547	smarca5	100	96.073	Mola_mola
ENSPLAG00000003363	smarca5	94	84.308	ENSMODG00000013187	-	94	84.308	Monodelphis_domestica
ENSPLAG00000003363	smarca5	100	96.818	ENSMALG00000002081	smarca5	100	96.818	Monopterus_albus
ENSPLAG00000003363	smarca5	95	81.407	MGP_CAROLIEiJ_G0033034	Smarca1	92	82.299	Mus_caroli
ENSPLAG00000003363	smarca5	95	81.508	ENSMUSG00000031099	Smarca1	92	82.299	Mus_musculus
ENSPLAG00000003363	smarca5	95	81.680	MGP_PahariEiJ_G0031579	Smarca1	92	82.582	Mus_pahari
ENSPLAG00000003363	smarca5	95	81.508	MGP_SPRETEiJ_G0034192	Smarca1	92	82.299	Mus_spretus
ENSPLAG00000003363	smarca5	95	82.036	ENSMPUG00000017423	SMARCA1	87	82.828	Mustela_putorius_furo
ENSPLAG00000003363	smarca5	95	80.777	ENSMLUG00000029614	SMARCA1	93	81.250	Myotis_lucifugus
ENSPLAG00000003363	smarca5	93	82.698	ENSNGAG00000006492	Smarca1	90	83.686	Nannospalax_galili
ENSPLAG00000003363	smarca5	96	97.990	ENSNBRG00000004463	smarca5	100	97.990	Neolamprologus_brichardi
ENSPLAG00000003363	smarca5	95	81.138	ENSNLEG00000015179	SMARCA1	94	84.076	Nomascus_leucogenys
ENSPLAG00000003363	smarca5	89	76.534	ENSMEUG00000008819	SMARCA1	97	76.534	Notamacropus_eugenii
ENSPLAG00000003363	smarca5	96	80.219	ENSODEG00000012163	SMARCA1	90	83.070	Octodon_degus
ENSPLAG00000003363	smarca5	100	97.394	ENSONIG00000009993	smarca5	100	97.394	Oreochromis_niloticus
ENSPLAG00000003363	smarca5	94	84.877	ENSOANG00000002862	SMARCA1	99	84.877	Ornithorhynchus_anatinus
ENSPLAG00000003363	smarca5	95	83.181	ENSOCUG00000001047	SMARCA1	92	83.742	Oryctolagus_cuniculus
ENSPLAG00000003363	smarca5	100	96.439	ENSORLG00000021998	smarca5	100	96.439	Oryzias_latipes
ENSPLAG00000003363	smarca5	100	96.435	ENSORLG00020017679	smarca5	100	96.435	Oryzias_latipes_hni
ENSPLAG00000003363	smarca5	100	96.818	ENSORLG00015017210	smarca5	100	96.818	Oryzias_latipes_hsok
ENSPLAG00000003363	smarca5	100	96.911	ENSOMEG00000000086	smarca5	100	96.911	Oryzias_melastigma
ENSPLAG00000003363	smarca5	93	83.470	ENSOGAG00000004399	SMARCA1	90	84.122	Otolemur_garnettii
ENSPLAG00000003363	smarca5	94	83.436	ENSOARG00000014638	SMARCA1	99	83.436	Ovis_aries
ENSPLAG00000003363	smarca5	95	82.828	ENSPPAG00000034647	SMARCA1	92	83.742	Pan_paniscus
ENSPLAG00000003363	smarca5	95	83.030	ENSPPRG00000008929	SMARCA1	92	83.845	Panthera_pardus
ENSPLAG00000003363	smarca5	95	81.132	ENSPTIG00000000915	SMARCA1	96	81.910	Panthera_tigris_altaica
ENSPLAG00000003363	smarca5	95	82.828	ENSPTRG00000049876	SMARCA1	90	84.984	Pan_troglodytes
ENSPLAG00000003363	smarca5	95	82.828	ENSPANG00000003871	SMARCA1	92	83.742	Papio_anubis
ENSPLAG00000003363	smarca5	95	82.401	ENSPKIG00000013411	smarca1	96	84.437	Paramormyrops_kingsleyae
ENSPLAG00000003363	smarca5	94	84.465	ENSPSIG00000010101	SMARCA1	99	84.465	Pelodiscus_sinensis
ENSPLAG00000003363	smarca5	93	82.492	ENSPEMG00000017503	Smarca1	90	83.475	Peromyscus_maniculatus_bairdii
ENSPLAG00000003363	smarca5	94	84.734	ENSPCIG00000015460	SMARCA1	96	84.734	Phascolarctos_cinereus
ENSPLAG00000003363	smarca5	100	100.000	ENSPFOG00000007649	smarca5	100	100.000	Poecilia_formosa
ENSPLAG00000003363	smarca5	100	99.903	ENSPMEG00000019849	smarca5	100	99.903	Poecilia_mexicana
ENSPLAG00000003363	smarca5	100	99.807	ENSPREG00000023250	smarca5	100	99.807	Poecilia_reticulata
ENSPLAG00000003363	smarca5	95	80.000	ENSPPYG00000020703	SMARCA1	92	80.879	Pongo_abelii
ENSPLAG00000003363	smarca5	75	76.636	ENSPCOG00000020722	SMARCA1	93	80.267	Propithecus_coquereli
ENSPLAG00000003363	smarca5	87	83.355	ENSPVAG00000003805	SMARCA1	84	83.443	Pteropus_vampyrus
ENSPLAG00000003363	smarca5	58	98.947	ENSPNYG00000012299	smarca5	93	98.947	Pundamilia_nyererei
ENSPLAG00000003363	smarca5	95	81.616	ENSRNOG00000003762	Smarca1	92	82.413	Rattus_norvegicus
ENSPLAG00000003363	smarca5	95	82.929	ENSRROG00000034167	SMARCA1	92	83.845	Rhinopithecus_roxellana
ENSPLAG00000003363	smarca5	94	83.640	ENSSBOG00000020641	SMARCA1	99	83.640	Saimiri_boliviensis_boliviensis
ENSPLAG00000003363	smarca5	94	79.630	ENSSHAG00000013518	SMARCA1	99	79.630	Sarcophilus_harrisii
ENSPLAG00000003363	smarca5	97	91.018	ENSSFOG00015016794	smarca5	100	92.990	Scleropages_formosus
ENSPLAG00000003363	smarca5	95	84.756	ENSSFOG00015009043	smarca1	96	85.348	Scleropages_formosus
ENSPLAG00000003363	smarca5	100	95.853	ENSSMAG00000004801	smarca5	100	95.853	Scophthalmus_maximus
ENSPLAG00000003363	smarca5	100	97.198	ENSSDUG00000020690	smarca5	100	97.198	Seriola_dumerili
ENSPLAG00000003363	smarca5	100	97.198	ENSSLDG00000025190	smarca5	100	97.198	Seriola_lalandi_dorsalis
ENSPLAG00000003363	smarca5	78	85.053	ENSSARG00000000842	SMARCA1	81	85.053	Sorex_araneus
ENSPLAG00000003363	smarca5	96	82.613	ENSSPUG00000000590	SMARCA1	93	84.953	Sphenodon_punctatus
ENSPLAG00000003363	smarca5	100	97.297	ENSSPAG00000002894	smarca5	100	97.297	Stegastes_partitus
ENSPLAG00000003363	smarca5	93	83.747	ENSSSCG00000012649	SMARCA1	95	83.316	Sus_scrofa
ENSPLAG00000003363	smarca5	95	83.605	ENSTGUG00000003899	-	99	83.845	Taeniopygia_guttata
ENSPLAG00000003363	smarca5	100	95.556	ENSTRUG00000014094	smarca5	100	95.556	Takifugu_rubripes
ENSPLAG00000003363	smarca5	98	94.685	ENSTNIG00000017717	smarca5	97	95.050	Tetraodon_nigroviridis
ENSPLAG00000003363	smarca5	86	82.483	ENSTBEG00000014973	SMARCA1	89	82.638	Tupaia_belangeri
ENSPLAG00000003363	smarca5	93	79.673	ENSTTRG00000006168	SMARCA1	96	80.442	Tursiops_truncatus
ENSPLAG00000003363	smarca5	95	82.828	ENSUAMG00000020201	SMARCA1	92	83.640	Ursus_americanus
ENSPLAG00000003363	smarca5	97	77.767	ENSUMAG00000004073	SMARCA1	95	85.679	Ursus_maritimus
ENSPLAG00000003363	smarca5	73	86.842	ENSVPAG00000010492	-	77	87.543	Vicugna_pacos
ENSPLAG00000003363	smarca5	95	83.030	ENSVVUG00000008878	SMARCA1	98	85.091	Vulpes_vulpes
ENSPLAG00000003363	smarca5	95	83.825	ENSXETG00000001526	smarca1	98	84.394	Xenopus_tropicalis
ENSPLAG00000003363	smarca5	97	99.603	ENSXCOG00000011170	smarca5	100	99.603	Xiphophorus_couchianus
ENSPLAG00000003363	smarca5	100	99.614	ENSXMAG00000009678	smarca5	100	99.614	Xiphophorus_maculatus