EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000003641 (Gene tree)
Gene ID: 106947590
Gene Symbol: sbds
Alias: -
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 3433 bases
Position: chrKQ545330.1:379759-383191
Accession: 106947590
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000002399	SBDS	PF01172.18	6e-34	1	1
ENSPLAP00000002399	SBDS_C	PF09377.10	7.6e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000013117	-	2080	XM_015032704	ENSPLAP00000002399	249 (aa)	XP_014888190	UPI00072E68F5

Gene Model

Click here to download ENSPLAG00000003641's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000003641's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000003641	sbds	100	80.723	ENSG00000126524	SBDS	97	87.952	Homo_sapiens
ENSPLAG00000003641	sbds	100	93.976	ENSAPOG00000014285	sbds	100	93.976	Acanthochromis_polyacanthus
ENSPLAG00000003641	sbds	100	80.723	ENSAMEG00000018167	SBDS	99	80.723	Ailuropoda_melanoleuca
ENSPLAG00000003641	sbds	100	94.048	ENSACIG00000007308	sbds	100	94.048	Amphilophus_citrinellus
ENSPLAG00000003641	sbds	100	94.378	ENSAOCG00000016770	sbds	100	94.378	Amphiprion_ocellaris
ENSPLAG00000003641	sbds	100	94.779	ENSAPEG00000015897	sbds	100	94.779	Amphiprion_percula
ENSPLAG00000003641	sbds	100	93.173	ENSATEG00000006901	sbds	100	93.173	Anabas_testudineus
ENSPLAG00000003641	sbds	93	74.026	ENSANAG00000024342	-	95	78.313	Aotus_nancymaae
ENSPLAG00000003641	sbds	83	79.126	ENSANAG00000037501	-	99	79.126	Aotus_nancymaae
ENSPLAG00000003641	sbds	100	94.378	ENSACLG00000018750	sbds	100	94.378	Astatotilapia_calliptera
ENSPLAG00000003641	sbds	100	86.345	ENSAMXG00000005361	sbds	99	86.345	Astyanax_mexicanus
ENSPLAG00000003641	sbds	100	81.124	ENSBTAG00000004051	SBDS	99	81.124	Bos_taurus
ENSPLAG00000003641	sbds	98	58.943	WBGene00021063	sbds-1	97	58.537	Caenorhabditis_elegans
ENSPLAG00000003641	sbds	100	80.723	ENSCJAG00000041007	SBDS	99	80.723	Callithrix_jacchus
ENSPLAG00000003641	sbds	100	78.884	ENSCAFG00000010797	SBDS	99	78.884	Canis_familiaris
ENSPLAG00000003641	sbds	100	80.723	ENSCAFG00020005357	SBDS	99	80.723	Canis_lupus_dingo
ENSPLAG00000003641	sbds	100	81.124	ENSCHIG00000026854	SBDS	99	81.124	Capra_hircus
ENSPLAG00000003641	sbds	100	80.723	ENSTSYG00000033822	SBDS	99	80.723	Carlito_syrichta
ENSPLAG00000003641	sbds	65	78.528	ENSCAPG00000006634	SBDS	99	78.528	Cavia_aperea
ENSPLAG00000003641	sbds	100	81.928	ENSCPOG00000036143	SBDS	99	81.928	Cavia_porcellus
ENSPLAG00000003641	sbds	100	80.723	ENSCCAG00000020671	SBDS	93	87.952	Cebus_capucinus
ENSPLAG00000003641	sbds	100	80.723	ENSCATG00000039026	SBDS	99	80.723	Cercocebus_atys
ENSPLAG00000003641	sbds	99	58.065	ENSCLAG00000002113	-	99	58.065	Chinchilla_lanigera
ENSPLAG00000003641	sbds	100	82.329	ENSCLAG00000005721	-	99	82.329	Chinchilla_lanigera
ENSPLAG00000003641	sbds	100	80.723	ENSCSAG00000018275	SBDS	99	80.723	Chlorocebus_sabaeus
ENSPLAG00000003641	sbds	100	75.904	ENSCHOG00000003795	SBDS	99	75.904	Choloepus_hoffmanni
ENSPLAG00000003641	sbds	100	84.337	ENSCPBG00000014893	SBDS	99	84.337	Chrysemys_picta_bellii
ENSPLAG00000003641	sbds	99	67.742	ENSCSAVG00000011811	-	99	67.742	Ciona_savignyi
ENSPLAG00000003641	sbds	100	80.321	ENSCANG00000032368	SBDS	99	80.321	Colobus_angolensis_palliatus
ENSPLAG00000003641	sbds	65	78.528	ENSCGRG00001019886	Sbds	99	78.528	Cricetulus_griseus_chok1gshd
ENSPLAG00000003641	sbds	83	80.583	ENSCGRG00000009211	Sbds	99	80.583	Cricetulus_griseus_crigri
ENSPLAG00000003641	sbds	100	91.566	ENSCSEG00000005798	sbds	100	91.566	Cynoglossus_semilaevis
ENSPLAG00000003641	sbds	100	95.984	ENSCVAG00000001053	sbds	100	95.984	Cyprinodon_variegatus
ENSPLAG00000003641	sbds	100	85.542	ENSDARG00000027803	sbds	99	85.542	Danio_rerio
ENSPLAG00000003641	sbds	100	81.124	ENSDNOG00000041174	SBDS	99	81.124	Dasypus_novemcinctus
ENSPLAG00000003641	sbds	100	83.133	ENSDORG00000026218	Sbds	99	83.133	Dipodomys_ordii
ENSPLAG00000003641	sbds	91	63.158	FBgn0035714	CG8549	98	61.943	Drosophila_melanogaster
ENSPLAG00000003641	sbds	93	60.345	ENSEBUG00000015780	sbds	99	60.345	Eptatretus_burgeri
ENSPLAG00000003641	sbds	100	80.723	ENSEASG00005008821	SBDS	99	80.723	Equus_asinus_asinus
ENSPLAG00000003641	sbds	100	80.723	ENSECAG00000008202	SBDS	99	80.723	Equus_caballus
ENSPLAG00000003641	sbds	84	60.577	ENSEEUG00000004768	SBDS	95	61.929	Erinaceus_europaeus
ENSPLAG00000003641	sbds	100	87.550	ENSELUG00000008382	sbds	99	87.550	Esox_lucius
ENSPLAG00000003641	sbds	100	80.723	ENSFCAG00000022142	SBDS	99	80.723	Felis_catus
ENSPLAG00000003641	sbds	100	86.345	ENSFALG00000013808	SBDS	99	86.345	Ficedula_albicollis
ENSPLAG00000003641	sbds	100	81.928	ENSFDAG00000018947	-	99	81.928	Fukomys_damarensis
ENSPLAG00000003641	sbds	100	92.369	ENSFHEG00000000708	sbds	100	92.369	Fundulus_heteroclitus
ENSPLAG00000003641	sbds	100	87.550	ENSGMOG00000018356	sbds	99	87.550	Gadus_morhua
ENSPLAG00000003641	sbds	100	83.133	ENSGALG00000027989	SBDS	99	83.133	Gallus_gallus
ENSPLAG00000003641	sbds	92	97.391	ENSGAFG00000014204	sbds	100	97.391	Gambusia_affinis
ENSPLAG00000003641	sbds	100	87.952	ENSGACG00000012697	sbds	100	87.952	Gasterosteus_aculeatus
ENSPLAG00000003641	sbds	86	84.507	ENSGAGG00000022402	SBDS	99	84.507	Gopherus_agassizii
ENSPLAG00000003641	sbds	96	62.500	ENSGGOG00000040023	-	92	62.500	Gorilla_gorilla
ENSPLAG00000003641	sbds	100	94.378	ENSHBUG00000002660	sbds	100	94.378	Haplochromis_burtoni
ENSPLAG00000003641	sbds	100	80.321	ENSHGLG00000009671	SBDS	99	80.321	Heterocephalus_glaber_female
ENSPLAG00000003641	sbds	100	80.321	ENSHGLG00100011332	SBDS	99	80.321	Heterocephalus_glaber_male
ENSPLAG00000003641	sbds	100	87.952	ENSHCOG00000018606	sbds	100	87.952	Hippocampus_comes
ENSPLAG00000003641	sbds	100	85.944	ENSIPUG00000006536	sbds	99	85.944	Ictalurus_punctatus
ENSPLAG00000003641	sbds	99	79.352	ENSJJAG00000012033	-	99	79.352	Jaculus_jaculus
ENSPLAG00000003641	sbds	100	58.333	ENSJJAG00000003934	-	99	58.800	Jaculus_jaculus
ENSPLAG00000003641	sbds	100	95.582	ENSKMAG00000018542	sbds	100	95.582	Kryptolebias_marmoratus
ENSPLAG00000003641	sbds	100	90.361	ENSLBEG00000016687	sbds	100	90.361	Labrus_bergylta
ENSPLAG00000003641	sbds	100	71.542	ENSLACG00000018916	SBDS	99	71.542	Latimeria_chalumnae
ENSPLAG00000003641	sbds	100	86.345	ENSLOCG00000004073	sbds	99	86.345	Lepisosteus_oculatus
ENSPLAG00000003641	sbds	100	81.124	ENSLAFG00000008763	SBDS	99	81.124	Loxodonta_africana
ENSPLAG00000003641	sbds	100	80.723	ENSMFAG00000032620	SBDS	99	80.723	Macaca_fascicularis
ENSPLAG00000003641	sbds	100	80.723	ENSMMUG00000045653	SBDS	99	80.723	Macaca_mulatta
ENSPLAG00000003641	sbds	100	80.723	ENSMNEG00000031523	SBDS	99	80.723	Macaca_nemestrina
ENSPLAG00000003641	sbds	100	65.217	ENSMLEG00000036826	SBDS	99	62.451	Mandrillus_leucophaeus
ENSPLAG00000003641	sbds	100	93.976	ENSMAMG00000016062	sbds	100	93.976	Mastacembelus_armatus
ENSPLAG00000003641	sbds	100	94.378	ENSMZEG00005024385	sbds	100	94.378	Maylandia_zebra
ENSPLAG00000003641	sbds	100	83.133	ENSMGAG00000002119	SBDS	99	83.133	Meleagris_gallopavo
ENSPLAG00000003641	sbds	100	67.068	ENSMAUG00000022214	-	100	67.068	Mesocricetus_auratus
ENSPLAG00000003641	sbds	100	81.124	ENSMICG00000014366	SBDS	99	81.124	Microcebus_murinus
ENSPLAG00000003641	sbds	100	81.526	ENSMOCG00000011739	Sbds	99	81.526	Microtus_ochrogaster
ENSPLAG00000003641	sbds	100	82.000	ENSMMOG00000005061	sbds	100	82.400	Mola_mola
ENSPLAG00000003641	sbds	100	82.329	ENSMODG00000006644	SBDS	99	82.329	Monodelphis_domestica
ENSPLAG00000003641	sbds	100	89.157	ENSMALG00000010219	sbds	100	89.157	Monopterus_albus
ENSPLAG00000003641	sbds	100	82.329	MGP_CAROLIEiJ_G0027800	Sbds	98	92.857	Mus_caroli
ENSPLAG00000003641	sbds	100	82.731	ENSMUSG00000025337	Sbds	98	92.857	Mus_musculus
ENSPLAG00000003641	sbds	100	82.329	MGP_PahariEiJ_G0024384	Sbds	98	92.857	Mus_pahari
ENSPLAG00000003641	sbds	100	82.731	MGP_SPRETEiJ_G0028798	Sbds	98	92.857	Mus_spretus
ENSPLAG00000003641	sbds	67	80.838	ENSMPUG00000016192	SBDS	96	80.838	Mustela_putorius_furo
ENSPLAG00000003641	sbds	73	75.138	ENSMLUG00000013575	SBDS	99	75.138	Myotis_lucifugus
ENSPLAG00000003641	sbds	100	82.329	ENSNGAG00000012093	Sbds	99	82.329	Nannospalax_galili
ENSPLAG00000003641	sbds	100	94.378	ENSNBRG00000017027	sbds	100	94.378	Neolamprologus_brichardi
ENSPLAG00000003641	sbds	100	80.723	ENSNLEG00000013288	SBDS	99	80.723	Nomascus_leucogenys
ENSPLAG00000003641	sbds	100	81.928	ENSOPRG00000008721	SBDS	99	81.928	Ochotona_princeps
ENSPLAG00000003641	sbds	100	63.454	ENSODEG00000001116	-	99	63.454	Octodon_degus
ENSPLAG00000003641	sbds	100	61.847	ENSODEG00000000137	-	84	64.257	Octodon_degus
ENSPLAG00000003641	sbds	100	73.494	ENSODEG00000019253	-	84	73.494	Octodon_degus
ENSPLAG00000003641	sbds	100	94.378	ENSONIG00000005874	sbds	100	94.378	Oreochromis_niloticus
ENSPLAG00000003641	sbds	83	78.641	ENSOANG00000007674	-	99	79.412	Ornithorhynchus_anatinus
ENSPLAG00000003641	sbds	100	82.731	ENSOCUG00000003170	SBDS	99	82.731	Oryctolagus_cuniculus
ENSPLAG00000003641	sbds	100	91.566	ENSORLG00000023489	sbds	100	91.566	Oryzias_latipes
ENSPLAG00000003641	sbds	100	91.165	ENSORLG00020019282	sbds	100	91.165	Oryzias_latipes_hni
ENSPLAG00000003641	sbds	100	91.165	ENSORLG00015008005	sbds	100	91.165	Oryzias_latipes_hsok
ENSPLAG00000003641	sbds	100	92.369	ENSOMEG00000022747	sbds	100	92.369	Oryzias_melastigma
ENSPLAG00000003641	sbds	100	69.880	ENSOGAG00000015036	-	99	69.880	Otolemur_garnettii
ENSPLAG00000003641	sbds	100	81.526	ENSOGAG00000009011	-	99	81.526	Otolemur_garnettii
ENSPLAG00000003641	sbds	100	81.124	ENSOARG00000010609	SBDS	99	81.124	Ovis_aries
ENSPLAG00000003641	sbds	100	79.920	ENSPPAG00000043889	-	99	79.920	Pan_paniscus
ENSPLAG00000003641	sbds	100	80.723	ENSPPRG00000002307	SBDS	99	80.723	Panthera_pardus
ENSPLAG00000003641	sbds	100	80.723	ENSPTIG00000021308	SBDS	99	80.723	Panthera_tigris_altaica
ENSPLAG00000003641	sbds	100	67.068	ENSPTRG00000047744	-	99	67.068	Pan_troglodytes
ENSPLAG00000003641	sbds	100	67.068	ENSPTRG00000050835	-	99	67.068	Pan_troglodytes
ENSPLAG00000003641	sbds	100	80.723	ENSPTRG00000019254	SBDS	99	80.723	Pan_troglodytes
ENSPLAG00000003641	sbds	87	78.341	ENSPTRG00000048174	-	88	82.234	Pan_troglodytes
ENSPLAG00000003641	sbds	100	80.723	ENSPANG00000004078	SBDS	99	80.723	Papio_anubis
ENSPLAG00000003641	sbds	100	88.755	ENSPKIG00000006489	sbds	99	88.755	Paramormyrops_kingsleyae
ENSPLAG00000003641	sbds	83	81.643	ENSPSIG00000014603	SBDS	99	81.643	Pelodiscus_sinensis
ENSPLAG00000003641	sbds	100	93.976	ENSPMGG00000004246	sbds	100	93.976	Periophthalmus_magnuspinnatus
ENSPLAG00000003641	sbds	100	82.329	ENSPEMG00000008728	Sbds	99	82.329	Peromyscus_maniculatus_bairdii
ENSPLAG00000003641	sbds	100	82.731	ENSPCIG00000029718	SBDS	99	82.731	Phascolarctos_cinereus
ENSPLAG00000003641	sbds	100	99.598	ENSPFOG00000015837	sbds	100	99.598	Poecilia_formosa
ENSPLAG00000003641	sbds	100	99.598	ENSPMEG00000019483	sbds	100	99.598	Poecilia_mexicana
ENSPLAG00000003641	sbds	100	98.795	ENSPREG00000018758	sbds	100	98.795	Poecilia_reticulata
ENSPLAG00000003641	sbds	100	80.723	ENSPPYG00000017513	SBDS	99	80.723	Pongo_abelii
ENSPLAG00000003641	sbds	100	80.723	ENSPCOG00000021098	SBDS	99	80.723	Propithecus_coquereli
ENSPLAG00000003641	sbds	100	81.124	ENSPVAG00000009369	SBDS	99	81.124	Pteropus_vampyrus
ENSPLAG00000003641	sbds	100	93.976	ENSPNYG00000022403	sbds	100	93.976	Pundamilia_nyererei
ENSPLAG00000003641	sbds	100	88.755	ENSPNAG00000001120	sbds	99	88.755	Pygocentrus_nattereri
ENSPLAG00000003641	sbds	100	82.329	ENSRNOG00000000888	Sbds	99	82.329	Rattus_norvegicus
ENSPLAG00000003641	sbds	100	80.723	ENSRBIG00000035557	SBDS	99	80.723	Rhinopithecus_bieti
ENSPLAG00000003641	sbds	100	80.723	ENSRROG00000040842	-	99	80.723	Rhinopithecus_roxellana
ENSPLAG00000003641	sbds	100	66.667	ENSRROG00000041986	-	99	66.667	Rhinopithecus_roxellana
ENSPLAG00000003641	sbds	96	42.683	YLR022C	-	96	42.683	Saccharomyces_cerevisiae
ENSPLAG00000003641	sbds	93	78.788	ENSSBOG00000022460	SBDS	99	78.788	Saimiri_boliviensis_boliviensis
ENSPLAG00000003641	sbds	100	71.084	ENSSHAG00000010263	SBDS	99	71.084	Sarcophilus_harrisii
ENSPLAG00000003641	sbds	100	89.157	ENSSFOG00015001108	sbds	99	89.157	Scleropages_formosus
ENSPLAG00000003641	sbds	100	91.566	ENSSMAG00000020506	sbds	100	91.566	Scophthalmus_maximus
ENSPLAG00000003641	sbds	100	92.771	ENSSDUG00000001528	sbds	100	92.771	Seriola_dumerili
ENSPLAG00000003641	sbds	100	92.771	ENSSLDG00000003659	sbds	100	92.771	Seriola_lalandi_dorsalis
ENSPLAG00000003641	sbds	61	86.928	ENSSARG00000013132	-	100	86.928	Sorex_araneus
ENSPLAG00000003641	sbds	73	89.535	ENSSARG00000001899	-	73	89.535	Sorex_araneus
ENSPLAG00000003641	sbds	100	81.526	ENSSPUG00000002699	SBDS	99	81.526	Sphenodon_punctatus
ENSPLAG00000003641	sbds	100	94.779	ENSSPAG00000016419	sbds	100	86.800	Stegastes_partitus
ENSPLAG00000003641	sbds	100	81.124	ENSSSCG00000007732	SBDS	99	81.124	Sus_scrofa
ENSPLAG00000003641	sbds	66	84.756	ENSTGUG00000003426	SBDS	99	84.756	Taeniopygia_guttata
ENSPLAG00000003641	sbds	100	93.173	ENSTRUG00000021443	sbds	100	93.173	Takifugu_rubripes
ENSPLAG00000003641	sbds	100	91.968	ENSTNIG00000019000	sbds	100	91.968	Tetraodon_nigroviridis
ENSPLAG00000003641	sbds	84	69.231	ENSTBEG00000001178	SBDS	94	70.558	Tupaia_belangeri
ENSPLAG00000003641	sbds	100	63.454	ENSTTRG00000003921	SBDS	99	63.454	Tursiops_truncatus
ENSPLAG00000003641	sbds	100	80.723	ENSUAMG00000001326	SBDS	99	80.723	Ursus_americanus
ENSPLAG00000003641	sbds	100	80.723	ENSUMAG00000015353	SBDS	99	80.723	Ursus_maritimus
ENSPLAG00000003641	sbds	100	80.723	ENSVVUG00000016478	SBDS	99	80.723	Vulpes_vulpes
ENSPLAG00000003641	sbds	100	83.936	ENSXETG00000010093	sbds	99	83.936	Xenopus_tropicalis
ENSPLAG00000003641	sbds	100	86.345	ENSXCOG00000010639	sbds	100	86.345	Xiphophorus_couchianus
ENSPLAG00000003641	sbds	100	98.394	ENSXMAG00000006065	sbds	100	98.394	Xiphophorus_maculatus