EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000003645 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171971
Alias: -
Full Name: DNA-directed RNA polymerase III subunit RPC4-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 9149 bases
Position: chrKQ546833.1:52418-61566
Accession: 106963311
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000002397	RNA_pol_Rpc4	PF05132.14	3.2e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000013115	-	1041	XM_015058152	ENSPLAP00000002397	346 (aa)	XP_014913638	-

Gene Model

Click here to download ENSPLAG00000003645's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000003645's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000003645	zgc:171971	95	35.294	ENSG00000168495	POLR3D	89	36.658	Homo_sapiens
ENSPLAG00000003645	zgc:171971	86	33.148	ENSAPOG00000012197	polr3d	91	34.358	Acanthochromis_polyacanthus
ENSPLAG00000003645	zgc:171971	91	49.471	ENSAPOG00000017634	zgc:171971	99	48.662	Acanthochromis_polyacanthus
ENSPLAG00000003645	zgc:171971	90	44.068	ENSAMEG00000003221	POLR3D	89	36.927	Ailuropoda_melanoleuca
ENSPLAG00000003645	zgc:171971	98	50.133	ENSACIG00000003707	zgc:171971	98	50.133	Amphilophus_citrinellus
ENSPLAG00000003645	zgc:171971	86	35.159	ENSAOCG00000005037	polr3d	91	35.735	Amphiprion_ocellaris
ENSPLAG00000003645	zgc:171971	90	50.678	ENSAOCG00000007733	zgc:171971	99	49.020	Amphiprion_ocellaris
ENSPLAG00000003645	zgc:171971	86	34.078	ENSAPEG00000013751	polr3d	91	34.637	Amphiprion_percula
ENSPLAG00000003645	zgc:171971	90	51.220	ENSAPEG00000016107	zgc:171971	99	49.755	Amphiprion_percula
ENSPLAG00000003645	zgc:171971	99	50.128	ENSATEG00000023125	zgc:171971	99	50.386	Anabas_testudineus
ENSPLAG00000003645	zgc:171971	68	38.961	ENSAPLG00000014393	POLR3D	72	38.961	Anas_platyrhynchos
ENSPLAG00000003645	zgc:171971	75	31.579	ENSACAG00000010592	POLR3D	83	32.827	Anolis_carolinensis
ENSPLAG00000003645	zgc:171971	95	35.539	ENSANAG00000030023	POLR3D	89	36.927	Aotus_nancymaae
ENSPLAG00000003645	zgc:171971	84	35.028	ENSACLG00000010147	polr3d	90	34.637	Astatotilapia_calliptera
ENSPLAG00000003645	zgc:171971	98	52.713	ENSACLG00000000074	zgc:171971	99	53.747	Astatotilapia_calliptera
ENSPLAG00000003645	zgc:171971	85	43.544	ENSAMXG00000019418	zgc:171971	87	44.311	Astyanax_mexicanus
ENSPLAG00000003645	zgc:171971	84	34.783	ENSAMXG00000010079	polr3d	88	35.598	Astyanax_mexicanus
ENSPLAG00000003645	zgc:171971	95	35.323	ENSBTAG00000010036	POLR3D	98	35.323	Bos_taurus
ENSPLAG00000003645	zgc:171971	95	35.539	ENSCJAG00000020278	POLR3D	83	36.927	Callithrix_jacchus
ENSPLAG00000003645	zgc:171971	95	36.029	ENSCAFG00000009455	POLR3D	98	36.275	Canis_familiaris
ENSPLAG00000003645	zgc:171971	95	36.029	ENSCAFG00020013027	POLR3D	98	36.275	Canis_lupus_dingo
ENSPLAG00000003645	zgc:171971	95	35.572	ENSCHIG00000012279	POLR3D	98	35.821	Capra_hircus
ENSPLAG00000003645	zgc:171971	95	36.520	ENSTSYG00000009055	POLR3D	98	36.765	Carlito_syrichta
ENSPLAG00000003645	zgc:171971	82	35.754	ENSCAPG00000010394	POLR3D	98	35.754	Cavia_aperea
ENSPLAG00000003645	zgc:171971	84	37.466	ENSCPOG00000003679	POLR3D	89	37.466	Cavia_porcellus
ENSPLAG00000003645	zgc:171971	95	35.049	ENSCCAG00000019817	POLR3D	89	36.388	Cebus_capucinus
ENSPLAG00000003645	zgc:171971	95	34.889	ENSCATG00000025950	POLR3D	89	36.216	Cercocebus_atys
ENSPLAG00000003645	zgc:171971	84	37.197	ENSCLAG00000014993	POLR3D	89	37.466	Chinchilla_lanigera
ENSPLAG00000003645	zgc:171971	95	34.889	ENSCSAG00000016525	POLR3D	98	35.049	Chlorocebus_sabaeus
ENSPLAG00000003645	zgc:171971	57	56.977	ENSCHOG00000000228	POLR3D	53	56.977	Choloepus_hoffmanni
ENSPLAG00000003645	zgc:171971	84	32.880	ENSCPBG00000001313	POLR3D	90	33.424	Chrysemys_picta_bellii
ENSPLAG00000003645	zgc:171971	90	31.519	ENSCSAVG00000007119	-	88	33.856	Ciona_savignyi
ENSPLAG00000003645	zgc:171971	84	36.216	ENSCANG00000043589	POLR3D	89	36.486	Colobus_angolensis_palliatus
ENSPLAG00000003645	zgc:171971	95	36.318	ENSCGRG00001010339	Polr3d	89	37.534	Cricetulus_griseus_chok1gshd
ENSPLAG00000003645	zgc:171971	95	36.318	ENSCGRG00000003956	Polr3d	89	37.534	Cricetulus_griseus_crigri
ENSPLAG00000003645	zgc:171971	99	47.906	ENSCSEG00000015509	zgc:171971	99	47.906	Cynoglossus_semilaevis
ENSPLAG00000003645	zgc:171971	86	34.270	ENSCSEG00000008123	polr3d	90	35.311	Cynoglossus_semilaevis
ENSPLAG00000003645	zgc:171971	92	53.803	ENSCVAG00000009078	-	97	53.803	Cyprinodon_variegatus
ENSPLAG00000003645	zgc:171971	86	32.527	ENSDARG00000104516	polr3d	91	33.799	Danio_rerio
ENSPLAG00000003645	zgc:171971	88	42.700	ENSDARG00000042054	zgc:171971	89	42.700	Danio_rerio
ENSPLAG00000003645	zgc:171971	74	44.872	ENSDNOG00000013488	POLR3D	89	36.388	Dasypus_novemcinctus
ENSPLAG00000003645	zgc:171971	80	42.373	ENSDORG00000011174	Polr3d	89	35.040	Dipodomys_ordii
ENSPLAG00000003645	zgc:171971	84	32.603	ENSETEG00000016516	POLR3D	89	35.890	Echinops_telfairi
ENSPLAG00000003645	zgc:171971	68	30.990	ENSEBUG00000014414	polr3d	97	32.070	Eptatretus_burgeri
ENSPLAG00000003645	zgc:171971	95	34.804	ENSEASG00005018824	POLR3D	98	35.049	Equus_asinus_asinus
ENSPLAG00000003645	zgc:171971	95	35.784	ENSECAG00000025090	-	98	36.029	Equus_caballus
ENSPLAG00000003645	zgc:171971	84	36.022	ENSEEUG00000007632	POLR3D	89	36.290	Erinaceus_europaeus
ENSPLAG00000003645	zgc:171971	87	44.011	ENSELUG00000017642	zgc:171971	86	44.602	Esox_lucius
ENSPLAG00000003645	zgc:171971	95	32.843	ENSFCAG00000005346	POLR3D	89	35.849	Felis_catus
ENSPLAG00000003645	zgc:171971	79	36.471	ENSFALG00000010907	POLR3D	98	36.471	Ficedula_albicollis
ENSPLAG00000003645	zgc:171971	84	35.849	ENSFDAG00000010144	POLR3D	89	36.119	Fukomys_damarensis
ENSPLAG00000003645	zgc:171971	84	35.057	ENSFHEG00000000508	polr3d	90	35.345	Fundulus_heteroclitus
ENSPLAG00000003645	zgc:171971	98	68.052	ENSFHEG00000003803	-	99	68.052	Fundulus_heteroclitus
ENSPLAG00000003645	zgc:171971	97	44.693	ENSGMOG00000015819	zgc:171971	99	44.693	Gadus_morhua
ENSPLAG00000003645	zgc:171971	80	34.421	ENSGALG00000032501	-	66	34.421	Gallus_gallus
ENSPLAG00000003645	zgc:171971	84	34.278	ENSGAFG00000010268	polr3d	90	35.977	Gambusia_affinis
ENSPLAG00000003645	zgc:171971	98	78.497	ENSGAFG00000009259	zgc:171971	99	78.497	Gambusia_affinis
ENSPLAG00000003645	zgc:171971	89	47.733	ENSGACG00000015436	zgc:171971	100	47.420	Gasterosteus_aculeatus
ENSPLAG00000003645	zgc:171971	84	32.337	ENSGAGG00000023229	POLR3D	90	32.880	Gopherus_agassizii
ENSPLAG00000003645	zgc:171971	95	35.294	ENSGGOG00000007302	POLR3D	89	36.658	Gorilla_gorilla
ENSPLAG00000003645	zgc:171971	84	35.028	ENSHBUG00000012288	polr3d	90	34.637	Haplochromis_burtoni
ENSPLAG00000003645	zgc:171971	98	52.073	ENSHBUG00000020493	zgc:171971	99	53.109	Haplochromis_burtoni
ENSPLAG00000003645	zgc:171971	95	34.321	ENSHGLG00000015415	POLR3D	98	36.790	Heterocephalus_glaber_female
ENSPLAG00000003645	zgc:171971	95	34.321	ENSHGLG00100014950	POLR3D	98	36.790	Heterocephalus_glaber_male
ENSPLAG00000003645	zgc:171971	97	45.576	ENSHCOG00000018819	-	87	48.348	Hippocampus_comes
ENSPLAG00000003645	zgc:171971	86	34.309	ENSIPUG00000003480	polr3d	93	35.561	Ictalurus_punctatus
ENSPLAG00000003645	zgc:171971	88	40.960	ENSIPUG00000008608	zgc:171971	90	40.960	Ictalurus_punctatus
ENSPLAG00000003645	zgc:171971	84	37.297	ENSSTOG00000016519	POLR3D	89	37.568	Ictidomys_tridecemlineatus
ENSPLAG00000003645	zgc:171971	95	36.520	ENSJJAG00000006743	Polr3d	98	36.765	Jaculus_jaculus
ENSPLAG00000003645	zgc:171971	98	50.128	ENSLBEG00000009545	zgc:171971	99	50.128	Labrus_bergylta
ENSPLAG00000003645	zgc:171971	84	33.155	ENSLACG00000016654	POLR3D	90	36.314	Latimeria_chalumnae
ENSPLAG00000003645	zgc:171971	63	46.753	ENSLOCG00000016080	polr3d	71	41.250	Lepisosteus_oculatus
ENSPLAG00000003645	zgc:171971	85	38.950	ENSLOCG00000006467	zgc:171971	90	40.187	Lepisosteus_oculatus
ENSPLAG00000003645	zgc:171971	95	35.539	ENSLAFG00000001562	POLR3D	98	35.294	Loxodonta_africana
ENSPLAG00000003645	zgc:171971	95	34.889	ENSMFAG00000029141	POLR3D	89	36.216	Macaca_fascicularis
ENSPLAG00000003645	zgc:171971	95	34.889	ENSMMUG00000023226	POLR3D	89	36.216	Macaca_mulatta
ENSPLAG00000003645	zgc:171971	95	34.889	ENSMNEG00000039410	POLR3D	89	36.216	Macaca_nemestrina
ENSPLAG00000003645	zgc:171971	95	34.889	ENSMLEG00000031413	POLR3D	89	36.216	Mandrillus_leucophaeus
ENSPLAG00000003645	zgc:171971	87	35.734	ENSMAMG00000008914	polr3d	91	36.338	Mastacembelus_armatus
ENSPLAG00000003645	zgc:171971	91	50.000	ENSMAMG00000020617	zgc:171971	99	48.985	Mastacembelus_armatus
ENSPLAG00000003645	zgc:171971	98	52.713	ENSMZEG00005003175	zgc:171971	99	53.747	Maylandia_zebra
ENSPLAG00000003645	zgc:171971	84	35.028	ENSMZEG00005011442	polr3d	90	34.637	Maylandia_zebra
ENSPLAG00000003645	zgc:171971	95	35.294	ENSMAUG00000006844	Polr3d	89	36.388	Mesocricetus_auratus
ENSPLAG00000003645	zgc:171971	96	36.893	ENSMICG00000001049	POLR3D	89	37.197	Microcebus_murinus
ENSPLAG00000003645	zgc:171971	95	34.069	ENSMOCG00000005195	Polr3d	89	37.197	Microtus_ochrogaster
ENSPLAG00000003645	zgc:171971	86	34.571	ENSMMOG00000013845	polr3d	90	34.857	Mola_mola
ENSPLAG00000003645	zgc:171971	83	34.615	ENSMODG00000009491	POLR3D	91	34.341	Monodelphis_domestica
ENSPLAG00000003645	zgc:171971	97	47.815	ENSMALG00000005659	zgc:171971	97	49.614	Monopterus_albus
ENSPLAG00000003645	zgc:171971	95	36.029	MGP_CAROLIEiJ_G0019481	Polr3d	89	37.197	Mus_caroli
ENSPLAG00000003645	zgc:171971	95	36.029	ENSMUSG00000000776	Polr3d	89	37.197	Mus_musculus
ENSPLAG00000003645	zgc:171971	95	35.821	MGP_PahariEiJ_G0030498	Polr3d	89	36.986	Mus_pahari
ENSPLAG00000003645	zgc:171971	95	36.275	MGP_SPRETEiJ_G0020373	Polr3d	89	37.466	Mus_spretus
ENSPLAG00000003645	zgc:171971	95	33.824	ENSMPUG00000003653	POLR3D	89	36.658	Mustela_putorius_furo
ENSPLAG00000003645	zgc:171971	84	36.927	ENSMLUG00000002109	POLR3D	89	37.197	Myotis_lucifugus
ENSPLAG00000003645	zgc:171971	84	36.927	ENSNGAG00000013872	Polr3d	98	35.952	Nannospalax_galili
ENSPLAG00000003645	zgc:171971	86	44.898	ENSNBRG00000022951	zgc:171971	92	45.773	Neolamprologus_brichardi
ENSPLAG00000003645	zgc:171971	84	35.795	ENSNBRG00000019106	polr3d	90	35.393	Neolamprologus_brichardi
ENSPLAG00000003645	zgc:171971	84	41.270	ENSMEUG00000000465	POLR3D	89	42.063	Notamacropus_eugenii
ENSPLAG00000003645	zgc:171971	84	36.927	ENSOPRG00000013146	POLR3D	89	37.197	Ochotona_princeps
ENSPLAG00000003645	zgc:171971	84	36.997	ENSODEG00000005884	POLR3D	90	37.265	Octodon_degus
ENSPLAG00000003645	zgc:171971	84	35.674	ENSONIG00000010634	polr3d	90	35.278	Oreochromis_niloticus
ENSPLAG00000003645	zgc:171971	98	52.577	ENSONIG00000007280	zgc:171971	99	53.351	Oreochromis_niloticus
ENSPLAG00000003645	zgc:171971	84	36.658	ENSOCUG00000017410	POLR3D	89	36.658	Oryctolagus_cuniculus
ENSPLAG00000003645	zgc:171971	86	34.091	ENSORLG00000011583	polr3d	92	34.659	Oryzias_latipes
ENSPLAG00000003645	zgc:171971	86	33.708	ENSORLG00020005668	polr3d	90	34.270	Oryzias_latipes_hni
ENSPLAG00000003645	zgc:171971	86	34.957	ENSORLG00015020291	polr3d	90	34.957	Oryzias_latipes_hsok
ENSPLAG00000003645	zgc:171971	86	33.708	ENSOMEG00000010120	polr3d	90	34.270	Oryzias_melastigma
ENSPLAG00000003645	zgc:171971	84	35.946	ENSOGAG00000004912	POLR3D	89	36.757	Otolemur_garnettii
ENSPLAG00000003645	zgc:171971	95	35.294	ENSOARG00000010372	-	71	36.388	Ovis_aries
ENSPLAG00000003645	zgc:171971	95	35.294	ENSPPAG00000029591	POLR3D	89	36.658	Pan_paniscus
ENSPLAG00000003645	zgc:171971	95	32.843	ENSPPRG00000022827	POLR3D	89	35.849	Panthera_pardus
ENSPLAG00000003645	zgc:171971	95	32.843	ENSPTIG00000018239	POLR3D	89	35.849	Panthera_tigris_altaica
ENSPLAG00000003645	zgc:171971	95	35.294	ENSPTRG00000020056	POLR3D	89	36.658	Pan_troglodytes
ENSPLAG00000003645	zgc:171971	95	34.889	ENSPANG00000009440	POLR3D	89	36.216	Papio_anubis
ENSPLAG00000003645	zgc:171971	63	44.186	ENSPKIG00000006727	polr3d	90	32.973	Paramormyrops_kingsleyae
ENSPLAG00000003645	zgc:171971	86	44.077	ENSPKIG00000025283	zgc:171971	87	44.077	Paramormyrops_kingsleyae
ENSPLAG00000003645	zgc:171971	74	45.513	ENSPSIG00000006113	POLR3D	68	45.513	Pelodiscus_sinensis
ENSPLAG00000003645	zgc:171971	86	35.015	ENSPMGG00000021658	polr3d	91	35.015	Periophthalmus_magnuspinnatus
ENSPLAG00000003645	zgc:171971	84	36.712	ENSPEMG00000023314	Polr3d	89	36.986	Peromyscus_maniculatus_bairdii
ENSPLAG00000003645	zgc:171971	84	35.714	ENSPCIG00000012699	POLR3D	89	36.264	Phascolarctos_cinereus
ENSPLAG00000003645	zgc:171971	98	82.124	ENSPFOG00000011089	zgc:171971	99	82.124	Poecilia_formosa
ENSPLAG00000003645	zgc:171971	98	81.606	ENSPMEG00000016953	zgc:171971	99	81.606	Poecilia_mexicana
ENSPLAG00000003645	zgc:171971	98	79.016	ENSPREG00000003755	-	99	79.016	Poecilia_reticulata
ENSPLAG00000003645	zgc:171971	95	34.804	ENSPPYG00000018419	POLR3D	89	36.119	Pongo_abelii
ENSPLAG00000003645	zgc:171971	73	46.939	ENSPCAG00000001971	POLR3D	89	34.890	Procavia_capensis
ENSPLAG00000003645	zgc:171971	84	37.466	ENSPCOG00000028134	POLR3D	89	37.736	Propithecus_coquereli
ENSPLAG00000003645	zgc:171971	95	35.539	ENSPVAG00000009873	POLR3D	98	35.697	Pteropus_vampyrus
ENSPLAG00000003645	zgc:171971	86	47.159	ENSPNYG00000008902	zgc:171971	89	48.295	Pundamilia_nyererei
ENSPLAG00000003645	zgc:171971	97	40.992	ENSPNAG00000018934	zgc:171971	91	41.076	Pygocentrus_nattereri
ENSPLAG00000003645	zgc:171971	86	33.422	ENSPNAG00000022324	polr3d	90	34.605	Pygocentrus_nattereri
ENSPLAG00000003645	zgc:171971	95	36.275	ENSRNOG00000010028	Polr3d	89	37.197	Rattus_norvegicus
ENSPLAG00000003645	zgc:171971	95	34.889	ENSRBIG00000035406	POLR3D	89	36.216	Rhinopithecus_bieti
ENSPLAG00000003645	zgc:171971	95	34.889	ENSRROG00000037278	POLR3D	89	36.216	Rhinopithecus_roxellana
ENSPLAG00000003645	zgc:171971	95	35.049	ENSSBOG00000024956	POLR3D	89	36.388	Saimiri_boliviensis_boliviensis
ENSPLAG00000003645	zgc:171971	68	32.680	ENSSHAG00000018257	POLR3D	98	33.621	Sarcophilus_harrisii
ENSPLAG00000003645	zgc:171971	69	41.489	ENSSFOG00015011547	zgc:171971	91	42.121	Scleropages_formosus
ENSPLAG00000003645	zgc:171971	99	49.485	ENSSMAG00000001465	zgc:171971	99	49.485	Scophthalmus_maximus
ENSPLAG00000003645	zgc:171971	62	48.684	ENSSMAG00000006271	polr3d	90	34.091	Scophthalmus_maximus
ENSPLAG00000003645	zgc:171971	99	50.995	ENSSDUG00000016019	zgc:171971	99	51.244	Seriola_dumerili
ENSPLAG00000003645	zgc:171971	72	44.595	ENSSLDG00000009643	polr3d	89	35.897	Seriola_lalandi_dorsalis
ENSPLAG00000003645	zgc:171971	99	50.995	ENSSLDG00000015968	zgc:171971	99	51.493	Seriola_lalandi_dorsalis
ENSPLAG00000003645	zgc:171971	84	34.232	ENSSARG00000012844	POLR3D	89	36.119	Sorex_araneus
ENSPLAG00000003645	zgc:171971	96	33.656	ENSSPUG00000000719	POLR3D	97	34.074	Sphenodon_punctatus
ENSPLAG00000003645	zgc:171971	86	34.831	ENSSPAG00000023326	polr3d	91	35.112	Stegastes_partitus
ENSPLAG00000003645	zgc:171971	98	49.716	ENSSPAG00000010384	zgc:171971	99	49.570	Stegastes_partitus
ENSPLAG00000003645	zgc:171971	73	46.104	ENSSSCG00000009622	POLR3D	89	36.712	Sus_scrofa
ENSPLAG00000003645	zgc:171971	86	33.803	ENSTRUG00000003555	polr3d	91	33.989	Takifugu_rubripes
ENSPLAG00000003645	zgc:171971	87	32.153	ENSTNIG00000006282	polr3d	91	33.708	Tetraodon_nigroviridis
ENSPLAG00000003645	zgc:171971	84	45.455	ENSTTRG00000012745	POLR3D	89	35.342	Tursiops_truncatus
ENSPLAG00000003645	zgc:171971	74	31.548	ENSUAMG00000026868	POLR3D	87	33.929	Ursus_americanus
ENSPLAG00000003645	zgc:171971	84	34.771	ENSUMAG00000005099	POLR3D	89	36.927	Ursus_maritimus
ENSPLAG00000003645	zgc:171971	95	36.029	ENSVVUG00000005290	POLR3D	98	36.275	Vulpes_vulpes
ENSPLAG00000003645	zgc:171971	63	50.000	ENSXETG00000010534	polr3d	69	43.671	Xenopus_tropicalis
ENSPLAG00000003645	zgc:171971	84	35.030	ENSXCOG00000015872	polr3d	89	37.237	Xiphophorus_couchianus
ENSPLAG00000003645	zgc:171971	84	33.711	ENSXMAG00000001872	polr3d	90	35.127	Xiphophorus_maculatus
ENSPLAG00000003645	zgc:171971	98	78.701	ENSXMAG00000014555	-	99	78.701	Xiphophorus_maculatus