EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000003823 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 3513 bases
Position: chrKQ549151.1:29422-32934
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000020699	RnaseA	PF00074.20	6.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000012875	-	444	-	ENSPLAP00000020699	147 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000003823's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000003823's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000003823	-	83	34.921	ENSPLAG00000000929	-	92	34.921
ENSPLAG00000003823	-	82	36.290	ENSPLAG00000003830	-	89	36.290
ENSPLAG00000003823	-	62	39.785	ENSPLAG00000006697	-	51	39.785

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000003823	-	84	35.714	ENSCVAG00000010919	-	92	35.714	Cyprinodon_variegatus
ENSPLAG00000003823	-	69	32.039	ENSFHEG00000010251	-	60	32.039	Fundulus_heteroclitus
ENSPLAG00000003823	-	80	35.772	ENSPFOG00000001988	-	94	35.772	Poecilia_formosa
ENSPLAG00000003823	-	81	40.496	ENSPFOG00000020382	-	78	40.496	Poecilia_formosa
ENSPLAG00000003823	-	85	35.938	ENSPFOG00000000984	-	96	35.938	Poecilia_formosa
ENSPLAG00000003823	-	87	35.115	ENSPFOG00000020379	-	77	35.156	Poecilia_formosa
ENSPLAG00000003823	-	86	81.102	ENSPMEG00000010366	-	68	81.102	Poecilia_mexicana
ENSPLAG00000003823	-	63	37.500	ENSPMEG00000010403	-	72	38.542	Poecilia_mexicana
ENSPLAG00000003823	-	82	35.484	ENSPMEG00000022740	-	89	35.484	Poecilia_mexicana
ENSPLAG00000003823	-	80	41.176	ENSPMEG00000006775	-	90	41.176	Poecilia_mexicana
ENSPLAG00000003823	-	82	37.903	ENSPMEG00000010387	-	82	37.903	Poecilia_mexicana
ENSPLAG00000003823	-	82	77.500	ENSPREG00000012794	-	81	77.500	Poecilia_reticulata
ENSPLAG00000003823	-	90	33.577	ENSPREG00000012805	-	99	33.577	Poecilia_reticulata
ENSPLAG00000003823	-	78	40.517	ENSXMAG00000000421	-	82	40.517	Xiphophorus_maculatus