EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000003902 (Gene tree)
Gene ID: 106943900
Gene Symbol: polr1c (1 of many)
Alias: -
Full Name: DNA-directed RNA polymerases I and III subunit RPAC1-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 1768 bases
Position: chrLMXD01042860.1:4004-5771
Accession: 106943900
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000002600	RNA_pol_A_bac	PF01000.26	4.9e-08	1	1
ENSPLAP00000002600	RNA_pol_L	PF01193.24	1.2e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000012768	-	399	XM_015027195	ENSPLAP00000002600	132 (aa)	XP_014882681	UPI00072EECCE

Gene Model

Click here to download ENSPLAG00000003902's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000003902's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000003902	polr1c	99	80.153	ENSG00000171453	POLR1C	89	80.800	Homo_sapiens
ENSPLAG00000003902	polr1c	100	80.882	ENSCVAG00000009585	polr1c	89	80.882	Cyprinodon_variegatus
ENSPLAG00000003902	polr1c	97	82.031	ENSDARG00000039400	polr1c	65	82.031	Danio_rerio
ENSPLAG00000003902	polr1c	100	96.212	ENSFHEG00000013867	-	64	96.212	Fundulus_heteroclitus
ENSPLAG00000003902	polr1c	98	55.385	MGP_CAROLIEiJ_G0021662	Polr1c	55	55.385	Mus_caroli
ENSPLAG00000003902	polr1c	98	77.692	ENSMUSG00000067148	Polr1c	99	75.728	Mus_musculus
ENSPLAG00000003902	polr1c	98	79.231	MGP_PahariEiJ_G0020654	Polr1c	99	76.699	Mus_pahari
ENSPLAG00000003902	polr1c	98	77.692	MGP_SPRETEiJ_G0022574	Polr1c	99	75.728	Mus_spretus
ENSPLAG00000003902	polr1c	100	86.364	ENSOMEG00000016527	polr1c	68	86.364	Oryzias_melastigma
ENSPLAG00000003902	polr1c	50	43.939	ENSTGUG00000017035	-	50	43.939	Taeniopygia_guttata