EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000004018 (Gene tree)
Gene ID: 106953366
Gene Symbol: lrpprc
Alias: -
Full Name: leucine rich pentatricopeptide repeat containing
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 71556 bases
Position: chrKQ545348.1:409080-480635
Accession: 106953366
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000020789	PPR	PF01535.20	2.3e-39	1	6
ENSPLAP00000020789	PPR	PF01535.20	2.3e-39	2	6
ENSPLAP00000020789	PPR	PF01535.20	2.3e-39	3	6
ENSPLAP00000020789	PPR	PF01535.20	2.3e-39	4	6
ENSPLAP00000020789	PPR	PF01535.20	2.3e-39	5	6
ENSPLAP00000020789	PPR	PF01535.20	2.3e-39	6	6

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000012630	-	4527	XM_015042080	ENSPLAP00000020789	1412 (aa)	XP_014897566	UPI00072E9296

Gene Model

Click here to download ENSPLAG00000004018's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000004018's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000004018	lrpprc	99	73.784	ENSAPOG00000016610	lrpprc	99	73.784	Acanthochromis_polyacanthus
ENSPLAG00000004018	lrpprc	94	51.838	ENSAMEG00000005852	LRPPRC	97	51.838	Ailuropoda_melanoleuca
ENSPLAG00000004018	lrpprc	99	70.270	ENSACIG00000009604	lrpprc	99	70.270	Amphilophus_citrinellus
ENSPLAG00000004018	lrpprc	99	74.719	ENSAOCG00000005886	lrpprc	99	74.719	Amphiprion_ocellaris
ENSPLAG00000004018	lrpprc	99	70.704	ENSAPEG00000002937	lrpprc	98	70.704	Amphiprion_percula
ENSPLAG00000004018	lrpprc	91	72.745	ENSATEG00000010555	lrpprc	98	71.374	Anabas_testudineus
ENSPLAG00000004018	lrpprc	95	55.547	ENSACAG00000029278	LRPPRC	99	53.916	Anolis_carolinensis
ENSPLAG00000004018	lrpprc	99	50.495	ENSANAG00000027440	LRPPRC	97	54.717	Aotus_nancymaae
ENSPLAG00000004018	lrpprc	96	69.091	ENSACLG00000023712	lrpprc	92	78.224	Astatotilapia_calliptera
ENSPLAG00000004018	lrpprc	99	50.212	ENSCJAG00000000794	LRPPRC	97	54.528	Callithrix_jacchus
ENSPLAG00000004018	lrpprc	98	50.613	ENSCHIG00000020173	LRPPRC	99	50.318	Capra_hircus
ENSPLAG00000004018	lrpprc	95	41.483	ENSCAPG00000013631	LRPPRC	99	41.483	Cavia_aperea
ENSPLAG00000004018	lrpprc	85	49.217	ENSCPOG00000000204	LRPPRC	99	49.217	Cavia_porcellus
ENSPLAG00000004018	lrpprc	99	49.859	ENSCCAG00000031900	LRPPRC	97	53.918	Cebus_capucinus
ENSPLAG00000004018	lrpprc	95	50.744	ENSCATG00000014187	LRPPRC	97	54.206	Cercocebus_atys
ENSPLAG00000004018	lrpprc	99	48.664	ENSCLAG00000005203	LRPPRC	99	48.628	Chinchilla_lanigera
ENSPLAG00000004018	lrpprc	95	51.152	ENSCSAG00000013233	LRPPRC	99	49.930	Chlorocebus_sabaeus
ENSPLAG00000004018	lrpprc	84	49.667	ENSCHOG00000003631	LRPPRC	84	49.667	Choloepus_hoffmanni
ENSPLAG00000004018	lrpprc	95	49.371	ENSCANG00000034961	LRPPRC	99	56.436	Colobus_angolensis_palliatus
ENSPLAG00000004018	lrpprc	99	49.257	ENSCGRG00001016261	Lrpprc	99	49.293	Cricetulus_griseus_chok1gshd
ENSPLAG00000004018	lrpprc	99	49.257	ENSCGRG00000004072	Lrpprc	99	49.293	Cricetulus_griseus_crigri
ENSPLAG00000004018	lrpprc	99	50.280	ENSCSEG00000003850	lrpprc	96	57.227	Cynoglossus_semilaevis
ENSPLAG00000004018	lrpprc	99	81.883	ENSCVAG00000012967	lrpprc	99	81.883	Cyprinodon_variegatus
ENSPLAG00000004018	lrpprc	99	57.582	ENSDARG00000043970	lrpprc	98	57.582	Danio_rerio
ENSPLAG00000004018	lrpprc	99	50.424	ENSDNOG00000012594	-	99	50.424	Dasypus_novemcinctus
ENSPLAG00000004018	lrpprc	77	42.259	ENSDNOG00000032336	-	95	42.259	Dasypus_novemcinctus
ENSPLAG00000004018	lrpprc	99	49.788	ENSDORG00000012233	Lrpprc	99	50.106	Dipodomys_ordii
ENSPLAG00000004018	lrpprc	99	50.528	ENSETEG00000006657	LRPPRC	99	50.774	Echinops_telfairi
ENSPLAG00000004018	lrpprc	72	54.364	ENSEEUG00000012340	LRPPRC	79	54.364	Erinaceus_europaeus
ENSPLAG00000004018	lrpprc	96	58.138	ENSELUG00000012803	lrpprc	99	58.138	Esox_lucius
ENSPLAG00000004018	lrpprc	99	50.954	ENSFCAG00000013468	LRPPRC	99	51.128	Felis_catus
ENSPLAG00000004018	lrpprc	94	49.962	ENSFALG00000012738	LRPPRC	98	49.962	Ficedula_albicollis
ENSPLAG00000004018	lrpprc	99	48.107	ENSFDAG00000015328	LRPPRC	99	48.107	Fukomys_damarensis
ENSPLAG00000004018	lrpprc	99	78.202	ENSFHEG00000019604	lrpprc	99	78.202	Fundulus_heteroclitus
ENSPLAG00000004018	lrpprc	99	61.908	ENSGMOG00000008337	lrpprc	99	61.908	Gadus_morhua
ENSPLAG00000004018	lrpprc	100	89.965	ENSGAFG00000001455	lrpprc	100	89.965	Gambusia_affinis
ENSPLAG00000004018	lrpprc	99	68.573	ENSGACG00000010679	lrpprc	99	70.719	Gasterosteus_aculeatus
ENSPLAG00000004018	lrpprc	100	75.826	ENSHBUG00000000393	lrpprc	98	75.826	Haplochromis_burtoni
ENSPLAG00000004018	lrpprc	99	47.716	ENSHGLG00000006123	LRPPRC	99	47.716	Heterocephalus_glaber_female
ENSPLAG00000004018	lrpprc	59	47.017	ENSHGLG00100005960	-	99	47.017	Heterocephalus_glaber_male
ENSPLAG00000004018	lrpprc	98	70.303	ENSHCOG00000002107	lrpprc	100	70.303	Hippocampus_comes
ENSPLAG00000004018	lrpprc	99	61.641	ENSIPUG00000009406	lrpprc	99	61.641	Ictalurus_punctatus
ENSPLAG00000004018	lrpprc	95	50.890	ENSSTOG00000011185	LRPPRC	99	49.788	Ictidomys_tridecemlineatus
ENSPLAG00000004018	lrpprc	95	50.630	ENSJJAG00000020475	Lrpprc	100	49.402	Jaculus_jaculus
ENSPLAG00000004018	lrpprc	99	65.806	ENSKMAG00000003287	lrpprc	85	65.806	Kryptolebias_marmoratus
ENSPLAG00000004018	lrpprc	99	62.561	ENSLBEG00000023225	lrpprc	96	71.206	Labrus_bergylta
ENSPLAG00000004018	lrpprc	99	57.472	ENSLACG00000014030	LRPPRC	99	57.472	Latimeria_chalumnae
ENSPLAG00000004018	lrpprc	99	60.502	ENSLOCG00000016390	lrpprc	97	60.502	Lepisosteus_oculatus
ENSPLAG00000004018	lrpprc	99	48.950	ENSLAFG00000008614	LRPPRC	99	49.090	Loxodonta_africana
ENSPLAG00000004018	lrpprc	95	50.967	ENSMFAG00000041560	LRPPRC	99	55.375	Macaca_fascicularis
ENSPLAG00000004018	lrpprc	95	50.260	ENSMMUG00000019841	LRPPRC	99	54.603	Macaca_mulatta
ENSPLAG00000004018	lrpprc	99	49.399	ENSMNEG00000031613	LRPPRC	97	54.019	Macaca_nemestrina
ENSPLAG00000004018	lrpprc	98	63.331	ENSMAMG00000021835	lrpprc	98	63.281	Mastacembelus_armatus
ENSPLAG00000004018	lrpprc	100	75.896	ENSMZEG00005027379	lrpprc	99	75.896	Maylandia_zebra
ENSPLAG00000004018	lrpprc	99	49.505	ENSMAUG00000012118	Lrpprc	99	49.963	Mesocricetus_auratus
ENSPLAG00000004018	lrpprc	99	50.353	ENSMICG00000010486	LRPPRC	97	54.120	Microcebus_murinus
ENSPLAG00000004018	lrpprc	99	50.141	ENSMOCG00000006048	Lrpprc	99	50.141	Microtus_ochrogaster
ENSPLAG00000004018	lrpprc	99	66.028	ENSMMOG00000007830	lrpprc	94	75.342	Mola_mola
ENSPLAG00000004018	lrpprc	95	50.295	ENSMODG00000000648	LRPPRC	99	50.295	Monodelphis_domestica
ENSPLAG00000004018	lrpprc	100	68.243	ENSMALG00000001271	lrpprc	99	68.172	Monopterus_albus
ENSPLAG00000004018	lrpprc	99	49.965	ENSMPUG00000011800	LRPPRC	100	51.918	Mustela_putorius_furo
ENSPLAG00000004018	lrpprc	99	50.282	ENSMLUG00000010575	LRPPRC	99	50.563	Myotis_lucifugus
ENSPLAG00000004018	lrpprc	99	49.398	ENSNGAG00000013069	Lrpprc	99	49.469	Nannospalax_galili
ENSPLAG00000004018	lrpprc	94	68.141	ENSNBRG00000013202	lrpprc	92	76.956	Neolamprologus_brichardi
ENSPLAG00000004018	lrpprc	99	49.719	ENSNLEG00000016782	LRPPRC	96	54.647	Nomascus_leucogenys
ENSPLAG00000004018	lrpprc	87	55.000	ENSOPRG00000016774	LRPPRC	92	44.895	Ochotona_princeps
ENSPLAG00000004018	lrpprc	99	49.082	ENSODEG00000011211	LRPPRC	99	49.085	Octodon_degus
ENSPLAG00000004018	lrpprc	100	75.387	ENSONIG00000000917	lrpprc	99	74.752	Oreochromis_niloticus
ENSPLAG00000004018	lrpprc	74	46.184	ENSOANG00000014670	-	100	46.184	Ornithorhynchus_anatinus
ENSPLAG00000004018	lrpprc	99	50.493	ENSOCUG00000015046	LRPPRC	95	50.669	Oryctolagus_cuniculus
ENSPLAG00000004018	lrpprc	99	69.802	ENSORLG00000004605	lrpprc	96	69.753	Oryzias_latipes
ENSPLAG00000004018	lrpprc	91	73.261	ENSORLG00020012536	lrpprc	99	73.083	Oryzias_latipes_hni
ENSPLAG00000004018	lrpprc	99	67.657	ENSORLG00015018270	lrpprc	99	67.445	Oryzias_latipes_hsok
ENSPLAG00000004018	lrpprc	99	50.070	ENSOGAG00000012798	LRPPRC	100	50.175	Otolemur_garnettii
ENSPLAG00000004018	lrpprc	95	51.375	ENSOARG00000006522	LRPPRC	99	50.318	Ovis_aries
ENSPLAG00000004018	lrpprc	95	50.297	ENSPPAG00000040876	LRPPRC	97	54.190	Pan_paniscus
ENSPLAG00000004018	lrpprc	99	50.777	ENSPPRG00000006578	LRPPRC	99	50.777	Panthera_pardus
ENSPLAG00000004018	lrpprc	95	52.197	ENSPTIG00000000933	LRPPRC	96	52.197	Panthera_tigris_altaica
ENSPLAG00000004018	lrpprc	99	50.035	ENSPTRG00000011880	LRPPRC	97	54.579	Pan_troglodytes
ENSPLAG00000004018	lrpprc	95	50.967	ENSPANG00000020731	LRPPRC	97	54.019	Papio_anubis
ENSPLAG00000004018	lrpprc	95	48.309	ENSPKIG00000022232	lrpprc	97	57.558	Paramormyrops_kingsleyae
ENSPLAG00000004018	lrpprc	61	53.935	ENSPSIG00000006830	-	98	53.935	Pelodiscus_sinensis
ENSPLAG00000004018	lrpprc	66	60.256	ENSPMGG00000016597	lrpprc	96	60.256	Periophthalmus_magnuspinnatus
ENSPLAG00000004018	lrpprc	93	46.148	ENSPMAG00000002147	lrpprc	99	46.148	Petromyzon_marinus
ENSPLAG00000004018	lrpprc	100	99.221	ENSPFOG00000011227	lrpprc	100	99.221	Poecilia_formosa
ENSPLAG00000004018	lrpprc	100	98.725	ENSPMEG00000016425	lrpprc	100	98.725	Poecilia_mexicana
ENSPLAG00000004018	lrpprc	100	96.459	ENSPREG00000003662	lrpprc	100	96.459	Poecilia_reticulata
ENSPLAG00000004018	lrpprc	57	47.453	ENSPPYG00000029532	-	99	47.453	Pongo_abelii
ENSPLAG00000004018	lrpprc	78	52.805	ENSPCAG00000001430	LRPPRC	84	50.170	Procavia_capensis
ENSPLAG00000004018	lrpprc	99	48.339	ENSPVAG00000002007	LRPPRC	99	48.517	Pteropus_vampyrus
ENSPLAG00000004018	lrpprc	100	66.713	ENSPNYG00000000756	lrpprc	90	77.660	Pundamilia_nyererei
ENSPLAG00000004018	lrpprc	99	63.955	ENSPNAG00000002895	lrpprc	99	63.955	Pygocentrus_nattereri
ENSPLAG00000004018	lrpprc	99	49.364	ENSRNOG00000005877	Lrpprc	99	49.469	Rattus_norvegicus
ENSPLAG00000004018	lrpprc	99	48.594	ENSRBIG00000031552	LRPPRC	99	48.878	Rhinopithecus_bieti
ENSPLAG00000004018	lrpprc	99	50.071	ENSSBOG00000011807	LRPPRC	97	54.869	Saimiri_boliviensis_boliviensis
ENSPLAG00000004018	lrpprc	95	50.000	ENSSHAG00000018725	LRPPRC	99	50.000	Sarcophilus_harrisii
ENSPLAG00000004018	lrpprc	99	54.861	ENSSFOG00015001042	lrpprc	99	54.861	Scleropages_formosus
ENSPLAG00000004018	lrpprc	99	71.358	ENSSDUG00000019062	lrpprc	99	71.358	Seriola_dumerili
ENSPLAG00000004018	lrpprc	99	62.799	ENSSLDG00000023028	lrpprc	99	63.823	Seriola_lalandi_dorsalis
ENSPLAG00000004018	lrpprc	90	48.651	ENSSARG00000000426	LRPPRC	99	48.284	Sorex_araneus
ENSPLAG00000004018	lrpprc	99	64.812	ENSSPAG00000000162	lrpprc	99	64.812	Stegastes_partitus
ENSPLAG00000004018	lrpprc	99	50.424	ENSSSCG00000008452	LRPPRC	99	50.424	Sus_scrofa
ENSPLAG00000004018	lrpprc	93	49.320	ENSTGUG00000003759	LRPPRC	99	49.320	Taeniopygia_guttata
ENSPLAG00000004018	lrpprc	100	67.105	ENSTRUG00000008409	lrpprc	96	67.105	Takifugu_rubripes
ENSPLAG00000004018	lrpprc	99	65.867	ENSTNIG00000007470	lrpprc	99	66.494	Tetraodon_nigroviridis
ENSPLAG00000004018	lrpprc	99	48.767	ENSTTRG00000006403	LRPPRC	99	48.909	Tursiops_truncatus
ENSPLAG00000004018	lrpprc	95	49.071	ENSVPAG00000008993	LRPPRC	99	49.071	Vicugna_pacos
ENSPLAG00000004018	lrpprc	99	55.830	ENSXETG00000009296	lrpprc	99	55.830	Xenopus_tropicalis
ENSPLAG00000004018	lrpprc	99	79.643	ENSXCOG00000013343	lrpprc	97	80.880	Xiphophorus_couchianus
ENSPLAG00000004018	lrpprc	100	89.258	ENSXMAG00000018108	lrpprc	100	89.258	Xiphophorus_maculatus