EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000004160 (Gene tree)
Gene ID: 106951115
Gene Symbol: hnrnpub
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 17444 bases
Position: chrKQ545756.1:285292-302735
Accession: 106951115
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000020875	SAP	PF02037.27	2.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000012419	-	5285	XM_015038436	ENSPLAP00000020875	813 (aa)	XP_014893922	UPI00072DFB14

Gene Model

Click here to download ENSPLAG00000004160's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000004160's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000004160	hnrnpub	75	33.710	ENSPLAG00000003485	si:ch211-107m4.1	66	37.844

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000004160	hnrnpub	89	60.811	ENSG00000153187	HNRNPU	99	63.333	Homo_sapiens
ENSPLAG00000004160	hnrnpub	100	81.640	ENSAPOG00000017400	hnrnpub	100	81.518	Acanthochromis_polyacanthus
ENSPLAG00000004160	hnrnpub	89	60.811	ENSAMEG00000009145	HNRNPU	79	64.062	Ailuropoda_melanoleuca
ENSPLAG00000004160	hnrnpub	100	74.217	ENSACIG00000012138	hnrnpub	96	82.295	Amphilophus_citrinellus
ENSPLAG00000004160	hnrnpub	100	83.476	ENSAOCG00000015843	hnrnpub	100	82.375	Amphiprion_ocellaris
ENSPLAG00000004160	hnrnpub	100	83.476	ENSAPEG00000014679	hnrnpub	100	82.375	Amphiprion_percula
ENSPLAG00000004160	hnrnpub	98	82.878	ENSATEG00000016178	hnrnpub	97	83.209	Anabas_testudineus
ENSPLAG00000004160	hnrnpub	87	66.667	ENSACAG00000004511	HNRNPU	78	66.667	Anolis_carolinensis
ENSPLAG00000004160	hnrnpub	85	54.870	ENSANAG00000033895	-	76	54.038	Aotus_nancymaae
ENSPLAG00000004160	hnrnpub	100	81.951	ENSACLG00000008165	hnrnpub	100	81.098	Astatotilapia_calliptera
ENSPLAG00000004160	hnrnpub	89	60.811	ENSBTAG00000007606	HNRNPU	81	64.062	Bos_taurus
ENSPLAG00000004160	hnrnpub	89	60.811	ENSCJAG00000016914	HNRNPU	81	64.062	Callithrix_jacchus
ENSPLAG00000004160	hnrnpub	80	55.963	ENSCAFG00020000918	HNRNPU	75	54.479	Canis_lupus_dingo
ENSPLAG00000004160	hnrnpub	80	55.963	ENSCHIG00000004900	HNRNPU	75	54.332	Capra_hircus
ENSPLAG00000004160	hnrnpub	89	62.162	ENSCPOG00000011887	HNRNPU	81	65.625	Cavia_porcellus
ENSPLAG00000004160	hnrnpub	89	60.811	ENSCCAG00000037859	-	81	64.062	Cebus_capucinus
ENSPLAG00000004160	hnrnpub	89	60.526	ENSCATG00000035273	HNRNPU	81	64.062	Cercocebus_atys
ENSPLAG00000004160	hnrnpub	89	62.162	ENSCLAG00000007100	HNRNPU	81	65.625	Chinchilla_lanigera
ENSPLAG00000004160	hnrnpub	80	55.657	ENSCSAG00000009219	HNRNPU	75	54.038	Chlorocebus_sabaeus
ENSPLAG00000004160	hnrnpub	86	78.261	ENSCHOG00000001387	HNRNPU	76	78.261	Choloepus_hoffmanni
ENSPLAG00000004160	hnrnpub	86	60.034	ENSCPBG00000009415	HNRNPU	79	67.241	Chrysemys_picta_bellii
ENSPLAG00000004160	hnrnpub	89	60.526	ENSCANG00000022780	HNRNPU	79	64.062	Colobus_angolensis_palliatus
ENSPLAG00000004160	hnrnpub	89	60.000	ENSCGRG00001020525	Hnrnpu	79	65.079	Cricetulus_griseus_chok1gshd
ENSPLAG00000004160	hnrnpub	100	75.118	ENSCSEG00000010804	hnrnpub	100	77.133	Cynoglossus_semilaevis
ENSPLAG00000004160	hnrnpub	92	77.633	ENSCVAG00000004280	hnrnpub	100	82.736	Cyprinodon_variegatus
ENSPLAG00000004160	hnrnpub	100	60.917	ENSDARG00000004735	hnrnpub	100	59.020	Danio_rerio
ENSPLAG00000004160	hnrnpub	100	60.024	ENSDARG00000015206	hnrnpua	100	58.131	Danio_rerio
ENSPLAG00000004160	hnrnpub	86	78.261	ENSDNOG00000000215	HNRNPU	88	78.261	Dasypus_novemcinctus
ENSPLAG00000004160	hnrnpub	80	55.963	ENSDORG00000015491	Hnrnpu	74	55.319	Dipodomys_ordii
ENSPLAG00000004160	hnrnpub	94	55.657	ENSETEG00000014565	HNRNPU	80	64.062	Echinops_telfairi
ENSPLAG00000004160	hnrnpub	81	55.639	ENSEASG00005003017	HNRNPU	75	54.479	Equus_asinus_asinus
ENSPLAG00000004160	hnrnpub	81	55.489	ENSECAG00000007955	HNRNPU	75	54.332	Equus_caballus
ENSPLAG00000004160	hnrnpub	100	71.077	ENSELUG00000010733	hnrnpub	100	69.438	Esox_lucius
ENSPLAG00000004160	hnrnpub	100	57.073	ENSELUG00000011966	hnrnpua	97	64.841	Esox_lucius
ENSPLAG00000004160	hnrnpub	80	55.878	ENSFCAG00000002156	HNRNPU	74	54.692	Felis_catus
ENSPLAG00000004160	hnrnpub	93	67.742	ENSFDAG00000006026	HNRNPU	99	67.742	Fukomys_damarensis
ENSPLAG00000004160	hnrnpub	100	90.061	ENSFHEG00000022639	hnrnpub	100	89.212	Fundulus_heteroclitus
ENSPLAG00000004160	hnrnpub	100	70.651	ENSGMOG00000001755	hnrnpub	99	69.276	Gadus_morhua
ENSPLAG00000004160	hnrnpub	72	70.175	ENSGALG00000010671	HNRNPU	78	70.175	Gallus_gallus
ENSPLAG00000004160	hnrnpub	100	97.112	ENSGAFG00000009369	hnrnpub	100	97.112	Gambusia_affinis
ENSPLAG00000004160	hnrnpub	100	71.005	ENSGACG00000004679	hnrnpub	99	70.114	Gasterosteus_aculeatus
ENSPLAG00000004160	hnrnpub	89	60.811	ENSGGOG00000004061	HNRNPU	81	64.062	Gorilla_gorilla
ENSPLAG00000004160	hnrnpub	100	82.317	ENSHBUG00000012290	hnrnpub	100	81.463	Haplochromis_burtoni
ENSPLAG00000004160	hnrnpub	89	62.162	ENSHGLG00000010594	-	79	65.625	Heterocephalus_glaber_female
ENSPLAG00000004160	hnrnpub	91	80.435	ENSHGLG00100015093	HNRNPU	99	80.435	Heterocephalus_glaber_male
ENSPLAG00000004160	hnrnpub	100	70.833	ENSHCOG00000020091	hnrnpub	83	75.284	Hippocampus_comes
ENSPLAG00000004160	hnrnpub	77	91.489	ENSIPUG00000007749	hnrnpu	95	83.333	Ictalurus_punctatus
ENSPLAG00000004160	hnrnpub	87	68.421	ENSJJAG00000011371	Hnrnpu	81	65.079	Jaculus_jaculus
ENSPLAG00000004160	hnrnpub	100	82.688	ENSKMAG00000004532	hnrnpub	100	81.432	Kryptolebias_marmoratus
ENSPLAG00000004160	hnrnpub	100	80.976	ENSLBEG00000022520	hnrnpub	100	81.144	Labrus_bergylta
ENSPLAG00000004160	hnrnpub	99	44.851	ENSLACG00000017463	HNRNPU	81	71.698	Latimeria_chalumnae
ENSPLAG00000004160	hnrnpub	92	68.601	ENSLOCG00000016652	hnrnpua	83	66.466	Lepisosteus_oculatus
ENSPLAG00000004160	hnrnpub	99	50.290	ENSLAFG00000021377	HNRNPU	81	64.062	Loxodonta_africana
ENSPLAG00000004160	hnrnpub	89	60.526	ENSMFAG00000037308	HNRNPU	81	64.062	Macaca_fascicularis
ENSPLAG00000004160	hnrnpub	80	55.657	ENSMMUG00000021098	HNRNPU	76	54.038	Macaca_mulatta
ENSPLAG00000004160	hnrnpub	89	60.526	ENSMNEG00000043645	HNRNPU	81	64.062	Macaca_nemestrina
ENSPLAG00000004160	hnrnpub	100	83.741	ENSMAMG00000007196	hnrnpub	100	83.902	Mastacembelus_armatus
ENSPLAG00000004160	hnrnpub	100	81.951	ENSMZEG00005003185	hnrnpub	100	81.098	Maylandia_zebra
ENSPLAG00000004160	hnrnpub	91	60.000	ENSMAUG00000008842	Hnrnpu	81	65.079	Mesocricetus_auratus
ENSPLAG00000004160	hnrnpub	89	60.526	ENSMICG00000004616	HNRNPU	81	64.062	Microcebus_murinus
ENSPLAG00000004160	hnrnpub	92	58.442	ENSMOCG00000015623	Hnrnpu	81	65.079	Microtus_ochrogaster
ENSPLAG00000004160	hnrnpub	88	63.077	ENSMODG00000006515	HNRNPU	80	64.615	Monodelphis_domestica
ENSPLAG00000004160	hnrnpub	96	82.995	ENSMALG00000018243	hnrnpub	99	82.653	Monopterus_albus
ENSPLAG00000004160	hnrnpub	80	56.575	MGP_CAROLIEiJ_G0014962	Hnrnpu	76	54.185	Mus_caroli
ENSPLAG00000004160	hnrnpub	80	56.422	ENSMUSG00000039630	Hnrnpu	76	54.185	Mus_musculus
ENSPLAG00000004160	hnrnpub	80	55.860	MGP_PahariEiJ_G0028193	Hnrnpu	76	53.891	Mus_pahari
ENSPLAG00000004160	hnrnpub	80	56.422	MGP_SPRETEiJ_G0015761	Hnrnpu	76	54.185	Mus_spretus
ENSPLAG00000004160	hnrnpub	90	59.459	ENSMLUG00000000475	HNRNPU	82	62.500	Myotis_lucifugus
ENSPLAG00000004160	hnrnpub	99	49.595	ENSNGAG00000019075	Hnrnpu	76	54.185	Nannospalax_galili
ENSPLAG00000004160	hnrnpub	100	81.951	ENSNBRG00000017855	hnrnpub	100	81.098	Neolamprologus_brichardi
ENSPLAG00000004160	hnrnpub	80	63.077	ENSMEUG00000000541	HNRNPU	79	64.615	Notamacropus_eugenii
ENSPLAG00000004160	hnrnpub	100	79.559	ENSONIG00000001260	hnrnpub	100	79.315	Oreochromis_niloticus
ENSPLAG00000004160	hnrnpub	81	60.811	ENSOCUG00000014469	HNRNPU	75	64.062	Oryctolagus_cuniculus
ENSPLAG00000004160	hnrnpub	100	81.373	ENSORLG00000016114	hnrnpub	100	81.863	Oryzias_latipes
ENSPLAG00000004160	hnrnpub	100	81.618	ENSORLG00020005363	hnrnpub	100	82.108	Oryzias_latipes_hni
ENSPLAG00000004160	hnrnpub	100	81.395	ENSORLG00015001190	hnrnpub	100	82.007	Oryzias_latipes_hsok
ENSPLAG00000004160	hnrnpub	100	81.985	ENSOMEG00000014951	hnrnpub	100	82.598	Oryzias_melastigma
ENSPLAG00000004160	hnrnpub	80	55.963	ENSOGAG00000014024	HNRNPU	75	54.332	Otolemur_garnettii
ENSPLAG00000004160	hnrnpub	88	64.615	ENSOARG00000004985	HNRNPU	89	64.615	Ovis_aries
ENSPLAG00000004160	hnrnpub	89	60.811	ENSPPAG00000038652	HNRNPU	81	64.062	Pan_paniscus
ENSPLAG00000004160	hnrnpub	92	60.811	ENSPPRG00000002662	HNRNPU	81	64.062	Panthera_pardus
ENSPLAG00000004160	hnrnpub	89	60.811	ENSPTRG00000002182	HNRNPU	81	64.062	Pan_troglodytes
ENSPLAG00000004160	hnrnpub	85	54.870	ENSPANG00000011643	HNRNPU	76	54.038	Papio_anubis
ENSPLAG00000004160	hnrnpub	100	64.320	ENSPKIG00000006885	hnrnpua	100	62.754	Paramormyrops_kingsleyae
ENSPLAG00000004160	hnrnpub	100	63.938	ENSPKIG00000022332	hnrnpub	82	67.003	Paramormyrops_kingsleyae
ENSPLAG00000004160	hnrnpub	88	63.077	ENSPCIG00000008657	HNRNPU	80	64.615	Phascolarctos_cinereus
ENSPLAG00000004160	hnrnpub	100	99.632	ENSPFOG00000002908	hnrnpub	100	99.632	Poecilia_formosa
ENSPLAG00000004160	hnrnpub	80	53.988	ENSPCOG00000003883	-	77	53.608	Propithecus_coquereli
ENSPLAG00000004160	hnrnpub	89	60.526	ENSPCOG00000018655	-	81	64.062	Propithecus_coquereli
ENSPLAG00000004160	hnrnpub	89	60.811	ENSPVAG00000002581	HNRNPU	81	64.062	Pteropus_vampyrus
ENSPLAG00000004160	hnrnpub	100	82.195	ENSPNYG00000021642	hnrnpub	100	81.341	Pundamilia_nyererei
ENSPLAG00000004160	hnrnpub	100	64.946	ENSPNAG00000001055	hnrnpub	100	60.192	Pygocentrus_nattereri
ENSPLAG00000004160	hnrnpub	80	56.489	ENSRNOG00000033790	Hnrnpu	75	54.505	Rattus_norvegicus
ENSPLAG00000004160	hnrnpub	85	54.184	ENSRBIG00000031519	HNRNPU	76	53.451	Rhinopithecus_bieti
ENSPLAG00000004160	hnrnpub	85	54.570	ENSRROG00000041642	HNRNPU	75	54.038	Rhinopithecus_roxellana
ENSPLAG00000004160	hnrnpub	100	64.964	ENSSFOG00015001124	hnrnpub	82	67.775	Scleropages_formosus
ENSPLAG00000004160	hnrnpub	100	63.626	ENSSFOG00015019004	hnrnpu	98	62.973	Scleropages_formosus
ENSPLAG00000004160	hnrnpub	85	84.438	ENSSMAG00000003607	hnrnpub	100	77.568	Scophthalmus_maximus
ENSPLAG00000004160	hnrnpub	100	81.774	ENSSDUG00000005912	hnrnpub	100	83.273	Seriola_dumerili
ENSPLAG00000004160	hnrnpub	100	80.993	ENSSLDG00000004899	hnrnpub	100	82.609	Seriola_lalandi_dorsalis
ENSPLAG00000004160	hnrnpub	87	82.927	ENSSPUG00000011393	HNRNPU	80	74.000	Sphenodon_punctatus
ENSPLAG00000004160	hnrnpub	100	81.963	ENSSPAG00000011853	hnrnpub	100	82.742	Stegastes_partitus
ENSPLAG00000004160	hnrnpub	89	60.811	ENSSSCG00000010877	HNRNPU	81	64.062	Sus_scrofa
ENSPLAG00000004160	hnrnpub	100	76.110	ENSTRUG00000007759	hnrnpub	100	73.772	Takifugu_rubripes
ENSPLAG00000004160	hnrnpub	89	60.811	ENSUAMG00000021120	HNRNPU	81	64.062	Ursus_americanus
ENSPLAG00000004160	hnrnpub	100	51.291	ENSUMAG00000012322	HNRNPU	84	58.462	Ursus_maritimus
ENSPLAG00000004160	hnrnpub	83	60.811	ENSVPAG00000010520	HNRNPU	85	64.062	Vicugna_pacos
ENSPLAG00000004160	hnrnpub	80	55.963	ENSVVUG00000026524	HNRNPU	75	54.479	Vulpes_vulpes
ENSPLAG00000004160	hnrnpub	99	48.739	ENSXETG00000011386	hnrnpu	56	63.576	Xenopus_tropicalis
ENSPLAG00000004160	hnrnpub	100	98.654	ENSXMAG00000010356	hnrnpub	100	98.654	Xiphophorus_maculatus