EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000004297 (Gene tree)
Gene ID: 106963266
Gene Symbol: hnrnpd
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein D
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 5634 bases
Position: chrKQ546828.1:63240-68873
Accession: 106963266
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000002902	CBFNT	PF08143.11	0.0003	1	1
ENSPLAP00000002902	RRM_1	PF00076.22	2.6e-33	1	2
ENSPLAP00000002902	RRM_1	PF00076.22	2.6e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000012264	-	2158	XM_015058081	ENSPLAP00000002902	317 (aa)	XP_014913567	UPI00072E07BF

Gene Model

Click here to download ENSPLAG00000004297's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000004297's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000004297	hnrnpd	77	40.678	ENSPLAG00000013254	hnrnpa1b	80	40.805
ENSPLAG00000004297	hnrnpd	53	36.000	ENSPLAG00000015223	-	58	36.207
ENSPLAG00000004297	hnrnpd	62	32.663	ENSPLAG00000007292	tardbpl	51	35.849
ENSPLAG00000004297	hnrnpd	91	62.500	ENSPLAG00000009450	hnrnpaba	94	61.290
ENSPLAG00000004297	hnrnpd	62	32.663	ENSPLAG00000014550	-	51	35.849
ENSPLAG00000004297	hnrnpd	89	58.824	ENSPLAG00000019814	-	92	63.356
ENSPLAG00000004297	hnrnpd	57	47.857	ENSPLAG00000000436	msi2a	74	47.857
ENSPLAG00000004297	hnrnpd	56	39.560	ENSPLAG00000009033	HNRNPA3	63	39.779
ENSPLAG00000004297	hnrnpd	78	39.044	ENSPLAG00000014025	-	54	46.471

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000004297	hnrnpd	88	79.928	ENSG00000138668	HNRNPD	100	89.189	Homo_sapiens
ENSPLAG00000004297	hnrnpd	100	94.322	ENSAPOG00000006184	hnrnpd	100	94.322	Acanthochromis_polyacanthus
ENSPLAG00000004297	hnrnpd	88	78.523	ENSAMEG00000005158	HNRNPD	92	79.125	Ailuropoda_melanoleuca
ENSPLAG00000004297	hnrnpd	81	92.996	ENSACIG00000008353	hnrnpd	96	88.889	Amphilophus_citrinellus
ENSPLAG00000004297	hnrnpd	100	94.006	ENSAOCG00000014191	hnrnpd	100	94.006	Amphiprion_ocellaris
ENSPLAG00000004297	hnrnpd	100	94.006	ENSAPEG00000005603	hnrnpd	100	94.006	Amphiprion_percula
ENSPLAG00000004297	hnrnpd	100	94.322	ENSATEG00000007097	hnrnpd	100	94.322	Anabas_testudineus
ENSPLAG00000004297	hnrnpd	94	82.692	ENSACAG00000010342	HNRNPD	100	83.077	Anolis_carolinensis
ENSPLAG00000004297	hnrnpd	88	79.928	ENSANAG00000035221	HNRNPD	82	84.532	Aotus_nancymaae
ENSPLAG00000004297	hnrnpd	92	95.769	ENSACLG00000026497	hnrnpd	100	95.769	Astatotilapia_calliptera
ENSPLAG00000004297	hnrnpd	100	93.691	ENSACLG00000025213	hnrnpd	100	90.536	Astatotilapia_calliptera
ENSPLAG00000004297	hnrnpd	100	85.174	ENSAMXG00000001477	hnrnpd	100	81.703	Astyanax_mexicanus
ENSPLAG00000004297	hnrnpd	88	74.832	ENSBTAG00000013952	HNRNPD	88	75.394	Bos_taurus
ENSPLAG00000004297	hnrnpd	88	79.928	ENSCJAG00000015165	HNRNPD	90	78.502	Callithrix_jacchus
ENSPLAG00000004297	hnrnpd	88	74.832	ENSCAFG00000025045	HNRNPD	88	74.448	Canis_familiaris
ENSPLAG00000004297	hnrnpd	88	74.832	ENSCAFG00020010713	HNRNPD	88	74.448	Canis_lupus_dingo
ENSPLAG00000004297	hnrnpd	88	79.928	ENSCHIG00000022317	HNRNPD	88	80.201	Capra_hircus
ENSPLAG00000004297	hnrnpd	89	77.561	ENSTSYG00000010395	HNRNPD	100	83.415	Carlito_syrichta
ENSPLAG00000004297	hnrnpd	90	68.367	ENSCPOG00000040484	HNRNPD	87	70.748	Cavia_porcellus
ENSPLAG00000004297	hnrnpd	63	57.214	ENSCCAG00000021563	-	100	55.721	Cebus_capucinus
ENSPLAG00000004297	hnrnpd	88	79.928	ENSCCAG00000024528	HNRNPD	88	80.537	Cebus_capucinus
ENSPLAG00000004297	hnrnpd	88	79.928	ENSCATG00000039829	HNRNPD	88	80.537	Cercocebus_atys
ENSPLAG00000004297	hnrnpd	89	80.216	ENSCLAG00000006540	HNRNPD	92	84.532	Chinchilla_lanigera
ENSPLAG00000004297	hnrnpd	88	74.832	ENSCSAG00000004463	HNRNPD	88	75.710	Chlorocebus_sabaeus
ENSPLAG00000004297	hnrnpd	94	77.491	ENSCHOG00000000045	HNRNPD	98	81.919	Choloepus_hoffmanni
ENSPLAG00000004297	hnrnpd	86	80.586	ENSCPBG00000008025	HNRNPD	94	77.244	Chrysemys_picta_bellii
ENSPLAG00000004297	hnrnpd	88	80.287	ENSCANG00000018501	HNRNPD	88	80.872	Colobus_angolensis_palliatus
ENSPLAG00000004297	hnrnpd	88	80.287	ENSCGRG00001014634	Hnrnpd	91	78.896	Cricetulus_griseus_chok1gshd
ENSPLAG00000004297	hnrnpd	89	77.860	ENSCGRG00000007563	Hnrnpd	96	81.985	Cricetulus_griseus_crigri
ENSPLAG00000004297	hnrnpd	100	86.520	ENSCSEG00000010909	hnrnpd	100	86.520	Cynoglossus_semilaevis
ENSPLAG00000004297	hnrnpd	100	97.476	ENSCVAG00000019790	hnrnpd	100	97.476	Cyprinodon_variegatus
ENSPLAG00000004297	hnrnpd	100	85.580	ENSDARG00000059246	hnrnpd	100	82.390	Danio_rerio
ENSPLAG00000004297	hnrnpd	89	79.705	ENSDNOG00000013830	-	76	82.288	Dasypus_novemcinctus
ENSPLAG00000004297	hnrnpd	68	70.370	ENSDNOG00000045079	-	61	74.033	Dasypus_novemcinctus
ENSPLAG00000004297	hnrnpd	61	69.072	ENSDNOG00000041055	-	76	69.072	Dasypus_novemcinctus
ENSPLAG00000004297	hnrnpd	88	80.216	ENSDORG00000012507	Hnrnpd	95	84.532	Dipodomys_ordii
ENSPLAG00000004297	hnrnpd	86	79.795	ENSETEG00000016709	HNRNPD	83	79.798	Echinops_telfairi
ENSPLAG00000004297	hnrnpd	88	79.928	ENSEASG00005016278	HNRNPD	82	84.532	Equus_asinus_asinus
ENSPLAG00000004297	hnrnpd	88	74.832	ENSECAG00000009344	HNRNPD	88	74.448	Equus_caballus
ENSPLAG00000004297	hnrnpd	88	65.772	ENSEEUG00000007552	HNRNPD	91	64.417	Erinaceus_europaeus
ENSPLAG00000004297	hnrnpd	78	78.175	ENSELUG00000003230	hnrnpd	94	75.000	Esox_lucius
ENSPLAG00000004297	hnrnpd	88	83.871	ENSFCAG00000027404	HNRNPD	88	74.448	Felis_catus
ENSPLAG00000004297	hnrnpd	88	80.216	ENSFALG00000005716	HNRNPD	89	80.537	Ficedula_albicollis
ENSPLAG00000004297	hnrnpd	89	82.288	ENSFDAG00000007958	HNRNPD	81	82.353	Fukomys_damarensis
ENSPLAG00000004297	hnrnpd	100	97.161	ENSFHEG00000006838	hnrnpd	100	97.161	Fundulus_heteroclitus
ENSPLAG00000004297	hnrnpd	100	75.938	ENSGMOG00000018481	hnrnpd	100	74.924	Gadus_morhua
ENSPLAG00000004297	hnrnpd	94	84.615	ENSGALG00000011184	HNRNPD	100	85.000	Gallus_gallus
ENSPLAG00000004297	hnrnpd	100	97.188	ENSGAFG00000003714	hnrnpd	100	97.188	Gambusia_affinis
ENSPLAG00000004297	hnrnpd	100	86.687	ENSGACG00000015669	hnrnpd	100	86.687	Gasterosteus_aculeatus
ENSPLAG00000004297	hnrnpd	86	75.342	ENSGAGG00000003656	HNRNPD	93	74.062	Gopherus_agassizii
ENSPLAG00000004297	hnrnpd	89	80.077	ENSGGOG00000026760	HNRNPD	94	84.674	Gorilla_gorilla
ENSPLAG00000004297	hnrnpd	100	93.375	ENSHBUG00000011794	hnrnpd	100	90.221	Haplochromis_burtoni
ENSPLAG00000004297	hnrnpd	88	80.576	ENSHGLG00000004214	HNRNPD	82	84.892	Heterocephalus_glaber_female
ENSPLAG00000004297	hnrnpd	94	80.385	ENSHGLG00100005996	HNRNPD	100	85.000	Heterocephalus_glaber_male
ENSPLAG00000004297	hnrnpd	100	81.562	ENSHCOG00000000087	hnrnpd	97	81.191	Hippocampus_comes
ENSPLAG00000004297	hnrnpd	98	81.410	ENSIPUG00000024954	hnrnpd	99	82.051	Ictalurus_punctatus
ENSPLAG00000004297	hnrnpd	88	79.928	ENSSTOG00000013970	HNRNPD	88	80.333	Ictidomys_tridecemlineatus
ENSPLAG00000004297	hnrnpd	88	79.928	ENSJJAG00000023387	Hnrnpd	97	82.007	Jaculus_jaculus
ENSPLAG00000004297	hnrnpd	100	92.429	ENSKMAG00000004310	hnrnpd	100	92.429	Kryptolebias_marmoratus
ENSPLAG00000004297	hnrnpd	100	93.060	ENSLBEG00000027508	hnrnpd	100	89.905	Labrus_bergylta
ENSPLAG00000004297	hnrnpd	95	80.795	ENSLACG00000005306	HNRNPD	94	78.073	Latimeria_chalumnae
ENSPLAG00000004297	hnrnpd	100	80.442	ENSLOCG00000010743	hnrnpd	100	75.710	Lepisosteus_oculatus
ENSPLAG00000004297	hnrnpd	94	77.860	ENSLAFG00000016483	HNRNPD	98	81.985	Loxodonta_africana
ENSPLAG00000004297	hnrnpd	88	79.928	ENSMFAG00000031674	HNRNPD	88	80.537	Macaca_fascicularis
ENSPLAG00000004297	hnrnpd	88	79.928	ENSMNEG00000028199	HNRNPD	88	80.537	Macaca_nemestrina
ENSPLAG00000004297	hnrnpd	88	79.928	ENSMLEG00000028370	HNRNPD	88	80.537	Mandrillus_leucophaeus
ENSPLAG00000004297	hnrnpd	100	93.375	ENSMAMG00000004971	hnrnpd	100	90.221	Mastacembelus_armatus
ENSPLAG00000004297	hnrnpd	100	93.691	ENSMZEG00005007558	hnrnpd	100	90.536	Maylandia_zebra
ENSPLAG00000004297	hnrnpd	94	84.674	ENSMGAG00000008051	HNRNPD	100	85.057	Meleagris_gallopavo
ENSPLAG00000004297	hnrnpd	88	80.287	ENSMAUG00000008830	Hnrnpd	93	77.885	Mesocricetus_auratus
ENSPLAG00000004297	hnrnpd	86	80.952	ENSMICG00000010984	HNRNPD	93	80.333	Microcebus_murinus
ENSPLAG00000004297	hnrnpd	88	80.287	ENSMOCG00000021398	Hnrnpd	85	82.699	Microtus_ochrogaster
ENSPLAG00000004297	hnrnpd	100	88.328	ENSMMOG00000008627	hnrnpd	100	88.328	Mola_mola
ENSPLAG00000004297	hnrnpd	88	74.667	ENSMODG00000011898	HNRNPD	84	75.472	Monodelphis_domestica
ENSPLAG00000004297	hnrnpd	100	94.006	ENSMALG00000016024	hnrnpd	100	94.006	Monopterus_albus
ENSPLAG00000004297	hnrnpd	88	80.287	MGP_CAROLIEiJ_G0027446	Hnrnpd	100	92.000	Mus_caroli
ENSPLAG00000004297	hnrnpd	88	80.287	ENSMUSG00000000568	Hnrnpd	100	92.000	Mus_musculus
ENSPLAG00000004297	hnrnpd	88	80.287	MGP_PahariEiJ_G0017224	Hnrnpd	100	92.000	Mus_pahari
ENSPLAG00000004297	hnrnpd	88	80.287	MGP_SPRETEiJ_G0028443	Hnrnpd	100	92.000	Mus_spretus
ENSPLAG00000004297	hnrnpd	94	77.860	ENSMPUG00000014782	HNRNPD	98	82.288	Mustela_putorius_furo
ENSPLAG00000004297	hnrnpd	88	68.456	ENSMLUG00000010628	HNRNPD	89	69.085	Myotis_lucifugus
ENSPLAG00000004297	hnrnpd	88	80.287	ENSNGAG00000013451	Hnrnpd	86	82.699	Nannospalax_galili
ENSPLAG00000004297	hnrnpd	100	93.060	ENSNBRG00000019548	hnrnpd	100	89.905	Neolamprologus_brichardi
ENSPLAG00000004297	hnrnpd	94	80.727	ENSNLEG00000008600	HNRNPD	84	85.091	Nomascus_leucogenys
ENSPLAG00000004297	hnrnpd	68	74.545	ENSMEUG00000006804	-	58	81.818	Notamacropus_eugenii
ENSPLAG00000004297	hnrnpd	88	72.391	ENSOPRG00000009336	HNRNPD	82	74.074	Ochotona_princeps
ENSPLAG00000004297	hnrnpd	88	80.216	ENSODEG00000001897	HNRNPD	87	84.532	Octodon_degus
ENSPLAG00000004297	hnrnpd	100	93.691	ENSONIG00000015390	hnrnpd	100	90.536	Oreochromis_niloticus
ENSPLAG00000004297	hnrnpd	94	80.000	ENSOANG00000001932	HNRNPD	100	84.615	Ornithorhynchus_anatinus
ENSPLAG00000004297	hnrnpd	94	77.860	ENSOCUG00000001357	HNRNPD	98	81.985	Oryctolagus_cuniculus
ENSPLAG00000004297	hnrnpd	100	91.483	ENSORLG00000001833	hnrnpd	100	89.590	Oryzias_latipes
ENSPLAG00000004297	hnrnpd	93	88.514	ENSORLG00020014780	hnrnpd	84	87.162	Oryzias_latipes_hni
ENSPLAG00000004297	hnrnpd	100	91.483	ENSORLG00015002382	hnrnpd	100	89.590	Oryzias_latipes_hsok
ENSPLAG00000004297	hnrnpd	100	88.013	ENSOMEG00000018558	hnrnpd	100	91.798	Oryzias_melastigma
ENSPLAG00000004297	hnrnpd	88	74.832	ENSOGAG00000004075	HNRNPD	88	74.448	Otolemur_garnettii
ENSPLAG00000004297	hnrnpd	94	77.860	ENSOARG00000000579	HNRNPD	98	82.288	Ovis_aries
ENSPLAG00000004297	hnrnpd	97	77.994	ENSPPAG00000035750	HNRNPD	100	83.415	Pan_paniscus
ENSPLAG00000004297	hnrnpd	88	79.928	ENSPPRG00000012258	HNRNPD	82	84.532	Panthera_pardus
ENSPLAG00000004297	hnrnpd	88	83.871	ENSPTIG00000019434	HNRNPD	100	82.007	Panthera_tigris_altaica
ENSPLAG00000004297	hnrnpd	88	79.928	ENSPTRG00000016215	HNRNPD	88	80.537	Pan_troglodytes
ENSPLAG00000004297	hnrnpd	88	79.928	ENSPANG00000011785	HNRNPD	88	80.537	Papio_anubis
ENSPLAG00000004297	hnrnpd	100	82.965	ENSPKIG00000025512	hnrnpd	100	78.997	Paramormyrops_kingsleyae
ENSPLAG00000004297	hnrnpd	77	86.893	ENSPSIG00000017029	HNRNPD	93	84.454	Pelodiscus_sinensis
ENSPLAG00000004297	hnrnpd	90	72.425	ENSPMGG00000017169	hnrnpd	98	74.324	Periophthalmus_magnuspinnatus
ENSPLAG00000004297	hnrnpd	97	72.727	ENSPEMG00000014804	Hnrnpd	95	75.000	Peromyscus_maniculatus_bairdii
ENSPLAG00000004297	hnrnpd	89	83.571	ENSPCIG00000003112	HNRNPD	78	83.929	Phascolarctos_cinereus
ENSPLAG00000004297	hnrnpd	100	99.369	ENSPFOG00000002596	hnrnpd	100	99.369	Poecilia_formosa
ENSPLAG00000004297	hnrnpd	100	99.369	ENSPMEG00000000152	hnrnpd	100	99.369	Poecilia_mexicana
ENSPLAG00000004297	hnrnpd	91	97.701	ENSPREG00000018081	hnrnpd	95	97.701	Poecilia_reticulata
ENSPLAG00000004297	hnrnpd	88	74.832	ENSPPYG00000014885	HNRNPD	88	75.710	Pongo_abelii
ENSPLAG00000004297	hnrnpd	63	70.866	ENSPPYG00000020411	-	74	75.893	Pongo_abelii
ENSPLAG00000004297	hnrnpd	88	73.579	ENSPCAG00000002182	HNRNPD	89	74.528	Procavia_capensis
ENSPLAG00000004297	hnrnpd	88	79.928	ENSPCOG00000021331	HNRNPD	82	84.532	Propithecus_coquereli
ENSPLAG00000004297	hnrnpd	88	72.819	ENSPVAG00000000003	HNRNPD	88	72.555	Pteropus_vampyrus
ENSPLAG00000004297	hnrnpd	100	93.060	ENSPNYG00000004884	hnrnpd	100	89.905	Pundamilia_nyererei
ENSPLAG00000004297	hnrnpd	100	81.703	ENSPNAG00000016368	hnrnpd	100	81.703	Pygocentrus_nattereri
ENSPLAG00000004297	hnrnpd	88	83.453	ENSRNOG00000002292	Hnrnpd	91	76.948	Rattus_norvegicus
ENSPLAG00000004297	hnrnpd	88	79.928	ENSRBIG00000035345	HNRNPD	88	80.537	Rhinopithecus_bieti
ENSPLAG00000004297	hnrnpd	88	79.928	ENSRROG00000011888	HNRNPD	88	80.537	Rhinopithecus_roxellana
ENSPLAG00000004297	hnrnpd	88	79.928	ENSSBOG00000032881	HNRNPD	88	80.537	Saimiri_boliviensis_boliviensis
ENSPLAG00000004297	hnrnpd	94	77.860	ENSSHAG00000013312	HNRNPD	98	82.288	Sarcophilus_harrisii
ENSPLAG00000004297	hnrnpd	100	82.650	ENSSFOG00015005913	hnrnpd	100	79.495	Scleropages_formosus
ENSPLAG00000004297	hnrnpd	100	89.308	ENSSMAG00000009686	hnrnpd	100	89.308	Scophthalmus_maximus
ENSPLAG00000004297	hnrnpd	100	92.429	ENSSDUG00000010792	hnrnpd	100	92.429	Seriola_dumerili
ENSPLAG00000004297	hnrnpd	100	88.679	ENSSLDG00000015962	hnrnpd	100	87.736	Seriola_lalandi_dorsalis
ENSPLAG00000004297	hnrnpd	94	76.384	ENSSARG00000006883	HNRNPD	98	79.705	Sorex_araneus
ENSPLAG00000004297	hnrnpd	89	80.843	ENSSPUG00000013677	HNRNPD	100	79.615	Sphenodon_punctatus
ENSPLAG00000004297	hnrnpd	100	94.006	ENSSPAG00000021014	hnrnpd	100	94.006	Stegastes_partitus
ENSPLAG00000004297	hnrnpd	88	79.928	ENSSSCG00000009249	HNRNPD	90	77.850	Sus_scrofa
ENSPLAG00000004297	hnrnpd	86	78.767	ENSTGUG00000002858	HNRNPD	93	76.948	Taeniopygia_guttata
ENSPLAG00000004297	hnrnpd	100	91.167	ENSTRUG00000018450	hnrnpd	100	88.959	Takifugu_rubripes
ENSPLAG00000004297	hnrnpd	68	91.284	ENSTNIG00000013499	hnrnpd	85	91.176	Tetraodon_nigroviridis
ENSPLAG00000004297	hnrnpd	89	73.063	ENSTBEG00000002327	HNRNPD	98	76.103	Tupaia_belangeri
ENSPLAG00000004297	hnrnpd	88	74.832	ENSTTRG00000007592	HNRNPD	88	74.448	Tursiops_truncatus
ENSPLAG00000004297	hnrnpd	89	79.705	ENSUAMG00000011374	HNRNPD	74	82.288	Ursus_americanus
ENSPLAG00000004297	hnrnpd	89	81.919	ENSUMAG00000008685	HNRNPD	83	82.288	Ursus_maritimus
ENSPLAG00000004297	hnrnpd	94	80.077	ENSVPAG00000004374	HNRNPD	100	84.674	Vicugna_pacos
ENSPLAG00000004297	hnrnpd	88	74.832	ENSVVUG00000024658	HNRNPD	88	74.448	Vulpes_vulpes
ENSPLAG00000004297	hnrnpd	89	75.714	ENSXETG00000012569	hnrnpd	93	78.495	Xenopus_tropicalis
ENSPLAG00000004297	hnrnpd	91	98.077	ENSXCOG00000017639	hnrnpd	100	98.077	Xiphophorus_couchianus
ENSPLAG00000004297	hnrnpd	100	98.428	ENSXMAG00000019151	hnrnpd	100	98.428	Xiphophorus_maculatus