EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000004316 (Gene tree)
Gene ID: 106951931
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 2584 bases
Position: chrKQ545795.1:208203-210786
Accession: 106951931
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000002919	GTP_EFTU	PF00009.27	2.3e-53	1	1
ENSPLAP00000002919	GTP_EFTU_D2	PF03144.25	3e-15	1	1
ENSPLAP00000002919	GTP_EFTU_D3	PF03143.17	2.7e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000012235	-	1386	XM_015039719	ENSPLAP00000002919	461 (aa)	XP_014895205	UPI0003B6459C

Gene Model

Click here to download ENSPLAG00000004316's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000004316's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000004316	-	100	86.797	ENSPLAG00000022915	eef1a1b	98	87.389
ENSPLAG00000004316	-	78	39.612	ENSPLAG00000001492	-	65	39.669
ENSPLAG00000004316	-	95	42.105	ENSPLAG00000006193	hbs1l	61	42.105
ENSPLAG00000004316	-	100	87.013	ENSPLAG00000005287	eef1a1b	98	87.389
ENSPLAG00000004316	-	100	89.610	ENSPLAG00000004325	-	97	90.402
ENSPLAG00000004316	-	100	66.594	ENSPLAG00000010405	si:dkey-37o8.1	98	67.562
ENSPLAG00000004316	-	66	40.984	ENSPLAG00000007443	GSPT1	58	41.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000004316	-	98	93.348	ENSAPOG00000004714	-	98	93.348	Acanthochromis_polyacanthus
ENSPLAG00000004316	-	90	93.947	ENSACIG00000001219	-	97	94.045	Amphilophus_citrinellus
ENSPLAG00000004316	-	87	94.789	ENSAOCG00000022002	-	98	94.789	Amphiprion_ocellaris
ENSPLAG00000004316	-	100	90.022	ENSAOCG00000022039	-	98	90.466	Amphiprion_ocellaris
ENSPLAG00000004316	-	100	90.672	ENSAPEG00000016361	-	98	91.131	Amphiprion_percula
ENSPLAG00000004316	-	98	95.787	ENSATEG00000003244	-	95	95.787	Anabas_testudineus
ENSPLAG00000004316	-	100	94.360	ENSACLG00000022560	-	98	94.457	Astatotilapia_calliptera
ENSPLAG00000004316	-	100	82.251	WBGene00001168	eef-1A.1	98	82.743	Caenorhabditis_elegans
ENSPLAG00000004316	-	100	82.251	WBGene00001169	eef-1A.2	98	82.743	Caenorhabditis_elegans
ENSPLAG00000004316	-	98	80.617	ENSCING00000018894	-	97	80.617	Ciona_intestinalis
ENSPLAG00000004316	-	99	84.498	ENSCING00000021478	-	98	85.078	Ciona_intestinalis
ENSPLAG00000004316	-	100	78.112	ENSCING00000007703	-	97	78.289	Ciona_intestinalis
ENSPLAG00000004316	-	98	81.319	ENSCING00000005126	-	98	81.319	Ciona_intestinalis
ENSPLAG00000004316	-	98	80.828	ENSCSAVG00000003196	-	98	80.828	Ciona_savignyi
ENSPLAG00000004316	-	99	75.817	ENSCSAVG00000001085	-	89	76.906	Ciona_savignyi
ENSPLAG00000004316	-	99	84.683	ENSCSAVG00000006357	-	96	94.000	Ciona_savignyi
ENSPLAG00000004316	-	98	81.978	ENSCSAVG00000009663	-	98	81.978	Ciona_savignyi
ENSPLAG00000004316	-	98	95.344	ENSCSEG00000008011	-	98	95.344	Cynoglossus_semilaevis
ENSPLAG00000004316	-	89	85.680	ENSCSEG00000007992	-	97	85.856	Cynoglossus_semilaevis
ENSPLAG00000004316	-	90	85.749	ENSCSEG00000007972	-	98	86.139	Cynoglossus_semilaevis
ENSPLAG00000004316	-	100	98.482	ENSCVAG00000019356	-	100	98.482	Cyprinodon_variegatus
ENSPLAG00000004316	-	98	85.619	FBgn0000557	eEF1alpha2	98	85.619	Drosophila_melanogaster
ENSPLAG00000004316	-	100	86.797	FBgn0284245	eEF1alpha1	97	87.277	Drosophila_melanogaster
ENSPLAG00000004316	-	99	82.609	ENSEBUG00000015814	-	98	83.149	Eptatretus_burgeri
ENSPLAG00000004316	-	100	97.831	ENSFHEG00000015054	-	100	97.831	Fundulus_heteroclitus
ENSPLAG00000004316	-	100	99.783	ENSGAFG00000014646	-	100	99.783	Gambusia_affinis
ENSPLAG00000004316	-	100	93.492	ENSGACG00000002143	-	98	93.792	Gasterosteus_aculeatus
ENSPLAG00000004316	-	98	95.565	ENSGACG00000002182	-	98	95.565	Gasterosteus_aculeatus
ENSPLAG00000004316	-	56	91.406	ENSHBUG00000017166	-	92	91.463	Haplochromis_burtoni
ENSPLAG00000004316	-	99	85.033	ENSHCOG00000008489	-	97	85.268	Hippocampus_comes
ENSPLAG00000004316	-	98	95.344	ENSHCOG00000008468	-	98	95.344	Hippocampus_comes
ENSPLAG00000004316	-	98	94.457	ENSLBEG00000002759	-	98	94.457	Labrus_bergylta
ENSPLAG00000004316	-	99	84.348	ENSLBEG00000002955	-	98	84.479	Labrus_bergylta
ENSPLAG00000004316	-	100	97.180	ENSMAMG00000007715	-	100	97.180	Mastacembelus_armatus
ENSPLAG00000004316	-	99	85.870	ENSMMOG00000001106	-	98	86.253	Mola_mola
ENSPLAG00000004316	-	98	92.683	ENSMMOG00000001165	-	100	94.444	Mola_mola
ENSPLAG00000004316	-	99	76.316	ENSMMOG00000018160	-	95	86.957	Mola_mola
ENSPLAG00000004316	-	100	83.117	ENSNBRG00000017346	-	97	82.965	Neolamprologus_brichardi
ENSPLAG00000004316	-	76	91.193	ENSONIG00000017760	-	98	91.193	Oreochromis_niloticus
ENSPLAG00000004316	-	100	97.180	ENSORLG00000007614	eef1a	100	97.180	Oryzias_latipes
ENSPLAG00000004316	-	100	97.180	ENSORLG00015002397	-	100	97.180	Oryzias_latipes_hsok
ENSPLAG00000004316	-	100	98.265	ENSOMEG00000018226	-	100	98.265	Oryzias_melastigma
ENSPLAG00000004316	-	95	48.519	ENSPMGG00000022427	-	97	60.000	Periophthalmus_magnuspinnatus
ENSPLAG00000004316	-	98	94.469	ENSPMGG00000023911	-	100	97.674	Periophthalmus_magnuspinnatus
ENSPLAG00000004316	-	100	100.000	ENSPFOG00000003924	-	100	100.000	Poecilia_formosa
ENSPLAG00000004316	-	100	99.783	ENSPMEG00000001010	-	100	99.783	Poecilia_mexicana
ENSPLAG00000004316	-	100	99.349	ENSPREG00000008243	-	100	99.349	Poecilia_reticulata
ENSPLAG00000004316	-	100	94.360	ENSPNYG00000007263	-	98	94.457	Pundamilia_nyererei
ENSPLAG00000004316	-	97	81.124	YPR080W	TEF1	98	80.488	Saccharomyces_cerevisiae
ENSPLAG00000004316	-	97	81.124	YBR118W	TEF2	98	80.488	Saccharomyces_cerevisiae
ENSPLAG00000004316	-	53	93.033	ENSSMAG00000016277	-	96	93.033	Scophthalmus_maximus
ENSPLAG00000004316	-	98	83.510	ENSSMAG00000018469	-	98	83.510	Scophthalmus_maximus
ENSPLAG00000004316	-	98	95.787	ENSSDUG00000008198	-	98	95.787	Seriola_dumerili
ENSPLAG00000004316	-	98	93.570	ENSSPAG00000001710	-	98	93.570	Stegastes_partitus
ENSPLAG00000004316	-	99	85.870	ENSTRUG00000005066	-	98	86.253	Takifugu_rubripes
ENSPLAG00000004316	-	98	95.565	ENSTRUG00000005727	ef-1a	98	95.565	Takifugu_rubripes
ENSPLAG00000004316	-	98	94.678	ENSTNIG00000002619	-	98	94.678	Tetraodon_nigroviridis
ENSPLAG00000004316	-	99	81.957	ENSTNIG00000002617	-	94	83.742	Tetraodon_nigroviridis
ENSPLAG00000004316	-	100	100.000	ENSXCOG00000001542	-	100	100.000	Xiphophorus_couchianus