EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000004455 (Gene tree)
Gene ID: 106937919
Gene Symbol: rbm17
Alias: -
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 13461 bases
Position: chrKQ547768.1:38101-51561
Accession: 106937919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000021014	RRM_1	PF00076.22	1.4e-05	1	1
ENSPLAP00000003044	RRM_1	PF00076.22	3.4e-05	1	1
ENSPLAP00000003044	G-patch	PF01585.23	3.5e-13	1	1
ENSPLAP00000021014	G-patch	PF01585.23	4.1e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000012049	-	1167	-	ENSPLAP00000021014	388 (aa)	-	-
ENSPLAT00000012037	-	1600	XM_015019667	ENSPLAP00000003044	421 (aa)	XP_014875153	UPI00072E4085

Gene Model

Click here to download ENSPLAG00000004455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000004455's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000004455	rbm17	100	78.774	ENSG00000134453	RBM17	100	78.066	Homo_sapiens
ENSPLAG00000004455	rbm17	99	92.566	ENSAPOG00000007101	rbm17	99	92.566	Acanthochromis_polyacanthus
ENSPLAG00000004455	rbm17	100	79.009	ENSAMEG00000002107	RBM17	100	78.302	Ailuropoda_melanoleuca
ENSPLAG00000004455	rbm17	100	87.654	ENSACIG00000006251	rbm17	100	87.654	Amphilophus_citrinellus
ENSPLAG00000004455	rbm17	100	92.399	ENSAOCG00000014892	rbm17	100	92.399	Amphiprion_ocellaris
ENSPLAG00000004455	rbm17	100	92.399	ENSAPEG00000022779	rbm17	100	92.399	Amphiprion_percula
ENSPLAG00000004455	rbm17	100	91.686	ENSATEG00000004406	rbm17	100	91.686	Anabas_testudineus
ENSPLAG00000004455	rbm17	100	78.774	ENSAPLG00000004190	RBM17	100	78.774	Anas_platyrhynchos
ENSPLAG00000004455	rbm17	90	76.546	ENSACAG00000005418	RBM17	99	76.546	Anolis_carolinensis
ENSPLAG00000004455	rbm17	100	71.500	ENSANAG00000019330	-	95	86.207	Aotus_nancymaae
ENSPLAG00000004455	rbm17	100	79.245	ENSANAG00000030127	RBM17	97	88.333	Aotus_nancymaae
ENSPLAG00000004455	rbm17	100	88.250	ENSACLG00000003928	rbm17	100	88.250	Astatotilapia_calliptera
ENSPLAG00000004455	rbm17	100	85.343	ENSAMXG00000005853	rbm17	100	85.343	Astyanax_mexicanus
ENSPLAG00000004455	rbm17	100	78.538	ENSBTAG00000021951	RBM17	100	77.830	Bos_taurus
ENSPLAG00000004455	rbm17	100	77.358	ENSBTAG00000011094	-	100	76.658	Bos_taurus
ENSPLAG00000004455	rbm17	75	33.856	WBGene00010233	F58B3.7	97	30.769	Caenorhabditis_elegans
ENSPLAG00000004455	rbm17	100	80.203	ENSCJAG00000020573	RBM17	100	79.949	Callithrix_jacchus
ENSPLAG00000004455	rbm17	100	79.009	ENSCAFG00000005206	RBM17	100	78.302	Canis_familiaris
ENSPLAG00000004455	rbm17	100	80.612	ENSCAFG00020005420	RBM17	100	80.357	Canis_lupus_dingo
ENSPLAG00000004455	rbm17	100	78.538	ENSCHIG00000023204	-	100	78.316	Capra_hircus
ENSPLAG00000004455	rbm17	100	76.415	ENSCHIG00000019921	-	100	75.708	Capra_hircus
ENSPLAG00000004455	rbm17	100	79.009	ENSTSYG00000001165	RBM17	99	88.983	Carlito_syrichta
ENSPLAG00000004455	rbm17	96	60.636	ENSCAPG00000006275	RBM17	100	66.573	Cavia_aperea
ENSPLAG00000004455	rbm17	100	78.922	ENSCPOG00000005679	RBM17	100	77.941	Cavia_porcellus
ENSPLAG00000004455	rbm17	100	79.245	ENSCCAG00000018655	RBM17	97	88.333	Cebus_capucinus
ENSPLAG00000004455	rbm17	100	78.774	ENSCATG00000041566	RBM17	97	88.333	Cercocebus_atys
ENSPLAG00000004455	rbm17	100	79.009	ENSCLAG00000012195	RBM17	99	78.302	Chinchilla_lanigera
ENSPLAG00000004455	rbm17	100	78.774	ENSCSAG00000013564	RBM17	100	78.066	Chlorocebus_sabaeus
ENSPLAG00000004455	rbm17	93	62.341	ENSCHOG00000005131	RBM17	100	61.578	Choloepus_hoffmanni
ENSPLAG00000004455	rbm17	100	79.245	ENSCPBG00000019836	RBM17	100	79.245	Chrysemys_picta_bellii
ENSPLAG00000004455	rbm17	100	44.630	ENSCSAVG00000008782	-	100	42.056	Ciona_savignyi
ENSPLAG00000004455	rbm17	97	75.332	ENSCANG00000023715	-	99	74.339	Colobus_angolensis_palliatus
ENSPLAG00000004455	rbm17	100	78.538	ENSCANG00000030987	RBM17	97	88.333	Colobus_angolensis_palliatus
ENSPLAG00000004455	rbm17	100	79.245	ENSCGRG00001013842	Rbm17	100	78.538	Cricetulus_griseus_chok1gshd
ENSPLAG00000004455	rbm17	100	65.578	ENSCGRG00001009256	-	100	62.469	Cricetulus_griseus_chok1gshd
ENSPLAG00000004455	rbm17	100	79.245	ENSCGRG00000006907	Rbm17	100	78.538	Cricetulus_griseus_crigri
ENSPLAG00000004455	rbm17	100	87.204	ENSCSEG00000018164	rbm17	100	87.204	Cynoglossus_semilaevis
ENSPLAG00000004455	rbm17	100	89.594	ENSCVAG00000002476	rbm17	100	89.594	Cyprinodon_variegatus
ENSPLAG00000004455	rbm17	100	76.471	ENSDARG00000031346	rbm17	100	79.294	Danio_rerio
ENSPLAG00000004455	rbm17	100	78.774	ENSDNOG00000035920	RBM17	100	78.066	Dasypus_novemcinctus
ENSPLAG00000004455	rbm17	99	38.568	FBgn0086683	Spf45	99	38.353	Drosophila_melanogaster
ENSPLAG00000004455	rbm17	93	79.646	ENSETEG00000006642	RBM17	82	87.000	Echinops_telfairi
ENSPLAG00000004455	rbm17	62	69.048	ENSEBUG00000010253	rbm17	81	69.048	Eptatretus_burgeri
ENSPLAG00000004455	rbm17	93	76.081	ENSEASG00005009236	-	100	76.330	Equus_asinus_asinus
ENSPLAG00000004455	rbm17	100	76.980	ENSEASG00005019205	-	100	77.778	Equus_asinus_asinus
ENSPLAG00000004455	rbm17	100	71.072	ENSECAG00000008939	RBM17	100	72.704	Equus_caballus
ENSPLAG00000004455	rbm17	100	70.025	ENSECAG00000001379	-	100	69.811	Equus_caballus
ENSPLAG00000004455	rbm17	86	61.580	ENSEEUG00000013077	RBM17	100	60.763	Erinaceus_europaeus
ENSPLAG00000004455	rbm17	100	84.848	ENSELUG00000006440	rbm17	100	84.848	Esox_lucius
ENSPLAG00000004455	rbm17	100	79.009	ENSFCAG00000031988	RBM17	100	78.302	Felis_catus
ENSPLAG00000004455	rbm17	100	78.066	ENSFALG00000001790	RBM17	100	78.066	Ficedula_albicollis
ENSPLAG00000004455	rbm17	100	79.009	ENSFDAG00000007470	RBM17	100	78.302	Fukomys_damarensis
ENSPLAG00000004455	rbm17	100	94.774	ENSFHEG00000001266	rbm17	100	93.224	Fundulus_heteroclitus
ENSPLAG00000004455	rbm17	99	79.762	ENSGMOG00000008438	rbm17	100	78.571	Gadus_morhua
ENSPLAG00000004455	rbm17	100	78.774	ENSGALG00000006332	RBM17	100	78.774	Gallus_gallus
ENSPLAG00000004455	rbm17	100	93.909	ENSGAFG00000019879	rbm17	100	93.909	Gambusia_affinis
ENSPLAG00000004455	rbm17	99	87.411	ENSGACG00000019174	rbm17	99	87.411	Gasterosteus_aculeatus
ENSPLAG00000004455	rbm17	100	79.245	ENSGAGG00000019906	RBM17	100	79.245	Gopherus_agassizii
ENSPLAG00000004455	rbm17	100	91.211	ENSHBUG00000016624	rbm17	100	91.211	Haplochromis_burtoni
ENSPLAG00000004455	rbm17	100	79.009	ENSHGLG00000011580	RBM17	100	78.302	Heterocephalus_glaber_female
ENSPLAG00000004455	rbm17	100	79.009	ENSHGLG00100010460	RBM17	100	78.302	Heterocephalus_glaber_male
ENSPLAG00000004455	rbm17	100	67.519	ENSHGLG00100010556	-	100	63.706	Heterocephalus_glaber_male
ENSPLAG00000004455	rbm17	99	87.589	ENSHCOG00000010865	rbm17	100	87.589	Hippocampus_comes
ENSPLAG00000004455	rbm17	100	81.221	ENSIPUG00000007699	Rbm17	100	80.905	Ictalurus_punctatus
ENSPLAG00000004455	rbm17	100	79.245	ENSSTOG00000013591	RBM17	100	78.538	Ictidomys_tridecemlineatus
ENSPLAG00000004455	rbm17	100	57.783	ENSJJAG00000000993	-	100	57.311	Jaculus_jaculus
ENSPLAG00000004455	rbm17	100	79.245	ENSJJAG00000022886	Rbm17	100	78.538	Jaculus_jaculus
ENSPLAG00000004455	rbm17	100	91.924	ENSKMAG00000021400	rbm17	100	91.924	Kryptolebias_marmoratus
ENSPLAG00000004455	rbm17	100	90.261	ENSLBEG00000000881	rbm17	100	90.261	Labrus_bergylta
ENSPLAG00000004455	rbm17	99	65.654	ENSLACG00000017297	RBM17	99	65.820	Latimeria_chalumnae
ENSPLAG00000004455	rbm17	100	81.265	ENSLOCG00000015659	rbm17	100	80.796	Lepisosteus_oculatus
ENSPLAG00000004455	rbm17	100	79.009	ENSLAFG00000011629	RBM17	100	78.302	Loxodonta_africana
ENSPLAG00000004455	rbm17	100	78.774	ENSMFAG00000035521	RBM17	97	88.333	Macaca_fascicularis
ENSPLAG00000004455	rbm17	100	78.774	ENSMMUG00000015152	RBM17	97	88.333	Macaca_mulatta
ENSPLAG00000004455	rbm17	100	78.774	ENSMNEG00000017264	RBM17	97	88.333	Macaca_nemestrina
ENSPLAG00000004455	rbm17	100	78.774	ENSMLEG00000029340	RBM17	97	88.333	Mandrillus_leucophaeus
ENSPLAG00000004455	rbm17	100	90.736	ENSMAMG00000000387	rbm17	100	90.736	Mastacembelus_armatus
ENSPLAG00000004455	rbm17	100	91.211	ENSMZEG00005015179	rbm17	100	91.211	Maylandia_zebra
ENSPLAG00000004455	rbm17	100	78.404	ENSMGAG00000003981	RBM17	100	78.404	Meleagris_gallopavo
ENSPLAG00000004455	rbm17	100	79.245	ENSMAUG00000019247	Rbm17	100	78.538	Mesocricetus_auratus
ENSPLAG00000004455	rbm17	100	79.404	ENSMICG00000003976	-	100	78.412	Microcebus_murinus
ENSPLAG00000004455	rbm17	100	73.882	ENSMICG00000041489	-	100	73.882	Microcebus_murinus
ENSPLAG00000004455	rbm17	93	63.198	ENSMOCG00000014517	-	99	65.489	Microtus_ochrogaster
ENSPLAG00000004455	rbm17	100	79.245	ENSMOCG00000011847	Rbm17	100	78.538	Microtus_ochrogaster
ENSPLAG00000004455	rbm17	100	82.439	ENSMMOG00000010264	rbm17	100	82.439	Mola_mola
ENSPLAG00000004455	rbm17	100	79.009	ENSMODG00000016648	RBM17	100	78.302	Monodelphis_domestica
ENSPLAG00000004455	rbm17	100	89.810	ENSMALG00000010597	rbm17	100	90.995	Monopterus_albus
ENSPLAG00000004455	rbm17	100	79.481	MGP_CAROLIEiJ_G0023173	Rbm17	100	79.481	Mus_caroli
ENSPLAG00000004455	rbm17	100	79.481	ENSMUSG00000037197	Rbm17	100	79.481	Mus_musculus
ENSPLAG00000004455	rbm17	100	79.481	MGP_PahariEiJ_G0019233	Rbm17	100	78.774	Mus_pahari
ENSPLAG00000004455	rbm17	100	79.481	MGP_SPRETEiJ_G0024091	Rbm17	100	79.481	Mus_spretus
ENSPLAG00000004455	rbm17	86	76.567	ENSMPUG00000016359	RBM17	96	75.749	Mustela_putorius_furo
ENSPLAG00000004455	rbm17	100	74.588	ENSMLUG00000025709	-	100	73.821	Myotis_lucifugus
ENSPLAG00000004455	rbm17	100	77.412	ENSMLUG00000002302	-	100	76.706	Myotis_lucifugus
ENSPLAG00000004455	rbm17	100	58.763	ENSNGAG00000000663	-	100	57.990	Nannospalax_galili
ENSPLAG00000004455	rbm17	100	79.245	ENSNGAG00000000741	Rbm17	100	78.538	Nannospalax_galili
ENSPLAG00000004455	rbm17	100	87.500	ENSNBRG00000018148	rbm17	100	88.175	Neolamprologus_brichardi
ENSPLAG00000004455	rbm17	100	79.156	ENSNLEG00000033350	RBM17	97	88.333	Nomascus_leucogenys
ENSPLAG00000004455	rbm17	100	73.821	ENSMEUG00000011347	RBM17	100	73.113	Notamacropus_eugenii
ENSPLAG00000004455	rbm17	100	68.473	ENSOPRG00000002993	RBM17	100	68.396	Ochotona_princeps
ENSPLAG00000004455	rbm17	97	61.757	ENSODEG00000007286	-	99	59.640	Octodon_degus
ENSPLAG00000004455	rbm17	100	78.824	ENSODEG00000004393	RBM17	100	78.118	Octodon_degus
ENSPLAG00000004455	rbm17	100	89.311	ENSONIG00000011838	rbm17	100	89.311	Oreochromis_niloticus
ENSPLAG00000004455	rbm17	100	78.538	ENSOANG00000015455	RBM17	100	79.009	Ornithorhynchus_anatinus
ENSPLAG00000004455	rbm17	100	91.449	ENSORLG00000028798	rbm17	100	91.449	Oryzias_latipes
ENSPLAG00000004455	rbm17	100	91.449	ENSORLG00020004593	rbm17	100	90.306	Oryzias_latipes_hni
ENSPLAG00000004455	rbm17	100	91.686	ENSORLG00015000033	rbm17	99	91.686	Oryzias_latipes_hsok
ENSPLAG00000004455	rbm17	100	92.162	ENSOMEG00000012060	rbm17	100	93.750	Oryzias_melastigma
ENSPLAG00000004455	rbm17	100	79.245	ENSOGAG00000015687	RBM17	100	79.245	Otolemur_garnettii
ENSPLAG00000004455	rbm17	100	78.538	ENSOARG00000012975	RBM17	100	77.830	Ovis_aries
ENSPLAG00000004455	rbm17	100	78.774	ENSPPAG00000032347	RBM17	97	88.333	Pan_paniscus
ENSPLAG00000004455	rbm17	100	79.009	ENSPPRG00000010706	RBM17	100	78.302	Panthera_pardus
ENSPLAG00000004455	rbm17	100	79.009	ENSPTIG00000007596	RBM17	100	78.302	Panthera_tigris_altaica
ENSPLAG00000004455	rbm17	100	78.774	ENSPTRG00000002265	RBM17	97	88.333	Pan_troglodytes
ENSPLAG00000004455	rbm17	100	78.774	ENSPANG00000023425	RBM17	97	88.333	Papio_anubis
ENSPLAG00000004455	rbm17	100	79.082	ENSPKIG00000005048	-	100	79.082	Paramormyrops_kingsleyae
ENSPLAG00000004455	rbm17	100	81.733	ENSPKIG00000025526	rbm17	100	80.094	Paramormyrops_kingsleyae
ENSPLAG00000004455	rbm17	100	78.454	ENSPSIG00000012332	RBM17	100	78.454	Pelodiscus_sinensis
ENSPLAG00000004455	rbm17	100	85.000	ENSPMGG00000007980	rbm17	100	85.000	Periophthalmus_magnuspinnatus
ENSPLAG00000004455	rbm17	100	79.245	ENSPEMG00000014320	Rbm17	100	78.538	Peromyscus_maniculatus_bairdii
ENSPLAG00000004455	rbm17	100	78.638	ENSPCIG00000019260	-	100	77.934	Phascolarctos_cinereus
ENSPLAG00000004455	rbm17	100	99.525	ENSPFOG00000013271	rbm17	100	99.525	Poecilia_formosa
ENSPLAG00000004455	rbm17	100	99.525	ENSPMEG00000014864	rbm17	100	99.525	Poecilia_mexicana
ENSPLAG00000004455	rbm17	100	97.862	ENSPREG00000015589	rbm17	100	97.862	Poecilia_reticulata
ENSPLAG00000004455	rbm17	100	78.774	ENSPPYG00000002067	RBM17	100	78.066	Pongo_abelii
ENSPLAG00000004455	rbm17	99	59.005	ENSPPYG00000019881	-	100	58.531	Pongo_abelii
ENSPLAG00000004455	rbm17	81	55.362	ENSPPYG00000019042	-	100	55.362	Pongo_abelii
ENSPLAG00000004455	rbm17	100	71.698	ENSPCAG00000016879	RBM17	100	70.991	Procavia_capensis
ENSPLAG00000004455	rbm17	100	79.747	ENSPCOG00000027881	RBM17	100	80.101	Propithecus_coquereli
ENSPLAG00000004455	rbm17	100	70.519	ENSPVAG00000015499	RBM17	100	69.340	Pteropus_vampyrus
ENSPLAG00000004455	rbm17	100	83.505	ENSPNYG00000015274	rbm17	100	82.864	Pundamilia_nyererei
ENSPLAG00000004455	rbm17	100	85.343	ENSPNAG00000030046	rbm17	100	85.343	Pygocentrus_nattereri
ENSPLAG00000004455	rbm17	100	79.245	ENSRNOG00000018767	Rbm17	100	78.538	Rattus_norvegicus
ENSPLAG00000004455	rbm17	100	79.653	ENSRBIG00000043727	RBM17	97	88.333	Rhinopithecus_bieti
ENSPLAG00000004455	rbm17	100	78.774	ENSRROG00000044142	RBM17	97	88.333	Rhinopithecus_roxellana
ENSPLAG00000004455	rbm17	100	79.949	ENSSBOG00000031661	-	92	90.351	Saimiri_boliviensis_boliviensis
ENSPLAG00000004455	rbm17	100	70.283	ENSSBOG00000023653	-	100	66.434	Saimiri_boliviensis_boliviensis
ENSPLAG00000004455	rbm17	100	79.717	ENSSHAG00000012480	-	100	79.717	Sarcophilus_harrisii
ENSPLAG00000004455	rbm17	100	80.706	ENSSFOG00015009892	rbm17	100	80.000	Scleropages_formosus
ENSPLAG00000004455	rbm17	100	87.404	ENSSMAG00000012368	rbm17	100	87.147	Scophthalmus_maximus
ENSPLAG00000004455	rbm17	100	90.979	ENSSDUG00000015015	rbm17	100	90.537	Seriola_dumerili
ENSPLAG00000004455	rbm17	100	90.979	ENSSLDG00000014486	rbm17	100	90.537	Seriola_lalandi_dorsalis
ENSPLAG00000004455	rbm17	50	76.364	ENSSARG00000001792	-	79	76.364	Sorex_araneus
ENSPLAG00000004455	rbm17	99	79.433	ENSSPUG00000001036	RBM17	99	79.433	Sphenodon_punctatus
ENSPLAG00000004455	rbm17	100	93.349	ENSSPAG00000002338	rbm17	100	93.349	Stegastes_partitus
ENSPLAG00000004455	rbm17	100	78.538	ENSSSCG00000011134	RBM17	100	77.830	Sus_scrofa
ENSPLAG00000004455	rbm17	100	78.538	ENSTGUG00000002013	RBM17	100	78.538	Taeniopygia_guttata
ENSPLAG00000004455	rbm17	100	89.786	ENSTRUG00000010698	rbm17	100	89.786	Takifugu_rubripes
ENSPLAG00000004455	rbm17	100	89.311	ENSTNIG00000006892	rbm17	100	89.311	Tetraodon_nigroviridis
ENSPLAG00000004455	rbm17	100	61.235	ENSTBEG00000014686	RBM17	100	62.963	Tupaia_belangeri
ENSPLAG00000004455	rbm17	90	77.285	ENSTTRG00000001344	RBM17	100	77.285	Tursiops_truncatus
ENSPLAG00000004455	rbm17	100	79.798	ENSUAMG00000009499	RBM17	100	79.899	Ursus_americanus
ENSPLAG00000004455	rbm17	100	79.009	ENSUMAG00000012237	RBM17	100	78.827	Ursus_maritimus
ENSPLAG00000004455	rbm17	100	67.689	ENSVPAG00000005497	RBM17	100	67.689	Vicugna_pacos
ENSPLAG00000004455	rbm17	100	80.612	ENSVVUG00000006780	RBM17	100	80.357	Vulpes_vulpes
ENSPLAG00000004455	rbm17	99	75.592	ENSXETG00000018123	rbm17	100	75.355	Xenopus_tropicalis
ENSPLAG00000004455	rbm17	100	96.675	ENSXMAG00000008674	rbm17	100	96.675	Xiphophorus_maculatus