EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000004526 (Gene tree)
Gene ID: 106958327
Gene Symbol: -
Alias: -
Full Name: serrate RNA effector molecule homolog
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 7250 bases
Position: chrKQ546294.1:90956-98205
Accession: 106958327
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000021075	ARS2	PF04959.13	1.6e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000011902	-	2718	XM_015050175	ENSPLAP00000021075	812 (aa)	XP_014905661	UPI00072ED5F5

Gene Model

Click here to download ENSPLAG00000004526's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000004526's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000004526	-	55	61.373	ENSG00000087087	SRRT	98	67.391	Homo_sapiens
ENSPLAG00000004526	-	55	64.009	ENSAPOG00000002304	srrt	54	61.311	Acanthochromis_polyacanthus
ENSPLAG00000004526	-	85	61.555	ENSAMEG00000014506	SRRT	79	61.039	Ailuropoda_melanoleuca
ENSPLAG00000004526	-	94	55.429	ENSACIG00000015795	srrt	92	54.859	Amphilophus_citrinellus
ENSPLAG00000004526	-	93	75.558	ENSAOCG00000009189	-	98	75.740	Amphiprion_ocellaris
ENSPLAG00000004526	-	94	57.015	ENSAOCG00000009693	srrt	92	55.757	Amphiprion_ocellaris
ENSPLAG00000004526	-	94	57.398	ENSAPEG00000003646	srrt	92	55.412	Amphiprion_percula
ENSPLAG00000004526	-	93	75.558	ENSAPEG00000020016	-	98	75.740	Amphiprion_percula
ENSPLAG00000004526	-	94	56.005	ENSATEG00000014425	srrt	81	63.283	Anabas_testudineus
ENSPLAG00000004526	-	60	79.767	ENSATEG00000003652	-	86	83.772	Anabas_testudineus
ENSPLAG00000004526	-	55	60.475	ENSACAG00000001014	SRRT	93	51.478	Anolis_carolinensis
ENSPLAG00000004526	-	55	60.465	ENSANAG00000031718	SRRT	93	52.984	Aotus_nancymaae
ENSPLAG00000004526	-	93	75.154	ENSACLG00000009423	-	98	75.704	Astatotilapia_calliptera
ENSPLAG00000004526	-	54	62.582	ENSAMXG00000016671	srrt	50	62.309	Astyanax_mexicanus
ENSPLAG00000004526	-	55	60.677	ENSBTAG00000001134	SRRT	93	52.311	Bos_taurus
ENSPLAG00000004526	-	70	37.313	WBGene00017085	E01A2.2	85	38.174	Caenorhabditis_elegans
ENSPLAG00000004526	-	55	60.677	ENSCJAG00000014917	SRRT	93	53.228	Callithrix_jacchus
ENSPLAG00000004526	-	96	53.231	ENSCAFG00000023538	SRRT	93	52.237	Canis_familiaris
ENSPLAG00000004526	-	98	53.783	ENSCAFG00020013358	SRRT	97	51.171	Canis_lupus_dingo
ENSPLAG00000004526	-	55	60.638	ENSCHIG00000010495	SRRT	93	52.542	Capra_hircus
ENSPLAG00000004526	-	96	53.389	ENSTSYG00000036426	SRRT	96	52.222	Carlito_syrichta
ENSPLAG00000004526	-	55	61.987	ENSCAPG00000013586	SRRT	97	53.951	Cavia_aperea
ENSPLAG00000004526	-	55	60.759	ENSCPOG00000001739	SRRT	93	53.098	Cavia_porcellus
ENSPLAG00000004526	-	55	60.465	ENSCCAG00000015877	SRRT	93	52.984	Cebus_capucinus
ENSPLAG00000004526	-	55	60.638	ENSCATG00000036306	SRRT	94	51.732	Cercocebus_atys
ENSPLAG00000004526	-	96	53.673	ENSCLAG00000007568	SRRT	93	52.920	Chinchilla_lanigera
ENSPLAG00000004526	-	55	60.465	ENSCSAG00000017996	SRRT	93	52.555	Chlorocebus_sabaeus
ENSPLAG00000004526	-	53	62.774	ENSCHOG00000007815	SRRT	60	67.769	Choloepus_hoffmanni
ENSPLAG00000004526	-	72	58.605	ENSCPBG00000011553	SRRT	75	57.561	Chrysemys_picta_bellii
ENSPLAG00000004526	-	100	39.418	ENSCING00000003506	-	54	47.689	Ciona_intestinalis
ENSPLAG00000004526	-	99	41.681	ENSCSAVG00000008394	-	77	52.326	Ciona_savignyi
ENSPLAG00000004526	-	55	60.638	ENSCANG00000034556	SRRT	93	52.689	Colobus_angolensis_palliatus
ENSPLAG00000004526	-	55	60.254	ENSCGRG00001001594	Srrt	93	52.977	Cricetulus_griseus_chok1gshd
ENSPLAG00000004526	-	85	59.454	ENSCGRG00000007292	Srrt	89	56.211	Cricetulus_griseus_crigri
ENSPLAG00000004526	-	96	51.273	ENSCSEG00000017878	srrt	50	57.792	Cynoglossus_semilaevis
ENSPLAG00000004526	-	93	70.385	ENSCSEG00000005233	-	98	70.940	Cynoglossus_semilaevis
ENSPLAG00000004526	-	94	56.532	ENSCVAG00000019848	srrt	92	55.852	Cyprinodon_variegatus
ENSPLAG00000004526	-	90	82.157	ENSCVAG00000017344	-	98	82.152	Cyprinodon_variegatus
ENSPLAG00000004526	-	94	63.462	ENSDARG00000017762	srrt	84	63.656	Danio_rerio
ENSPLAG00000004526	-	55	60.465	ENSDNOG00000003851	SRRT	93	52.068	Dasypus_novemcinctus
ENSPLAG00000004526	-	55	60.981	ENSDORG00000005584	Srrt	93	53.309	Dipodomys_ordii
ENSPLAG00000004526	-	91	46.169	FBgn0033062	Ars2	67	49.353	Drosophila_melanogaster
ENSPLAG00000004526	-	78	58.420	ENSETEG00000016175	SRRT	68	57.796	Echinops_telfairi
ENSPLAG00000004526	-	77	50.384	ENSEBUG00000008517	-	88	50.853	Eptatretus_burgeri
ENSPLAG00000004526	-	96	53.349	ENSEASG00005016956	SRRT	93	52.311	Equus_asinus_asinus
ENSPLAG00000004526	-	96	53.349	ENSECAG00000012292	SRRT	93	52.311	Equus_caballus
ENSPLAG00000004526	-	78	62.821	ENSEEUG00000009117	SRRT	85	56.213	Erinaceus_europaeus
ENSPLAG00000004526	-	89	63.889	ENSELUG00000006651	srrt	72	64.516	Esox_lucius
ENSPLAG00000004526	-	93	64.671	ENSELUG00000021216	-	93	64.217	Esox_lucius
ENSPLAG00000004526	-	55	60.677	ENSFCAG00000006855	SRRT	93	52.190	Felis_catus
ENSPLAG00000004526	-	55	59.002	ENSFDAG00000021347	SRRT	92	52.163	Fukomys_damarensis
ENSPLAG00000004526	-	78	64.303	ENSFHEG00000002756	srrt	85	64.059	Fundulus_heteroclitus
ENSPLAG00000004526	-	56	77.637	ENSFHEG00000004105	-	94	76.559	Fundulus_heteroclitus
ENSPLAG00000004526	-	95	52.996	ENSGMOG00000018619	srrt	51	61.739	Gadus_morhua
ENSPLAG00000004526	-	83	73.134	ENSGMOG00000018694	-	83	66.134	Gadus_morhua
ENSPLAG00000004526	-	100	95.859	ENSGAFG00000020383	-	100	95.859	Gambusia_affinis
ENSPLAG00000004526	-	94	54.900	ENSGACG00000020387	srrt	51	63.519	Gasterosteus_aculeatus
ENSPLAG00000004526	-	93	69.634	ENSGACG00000001100	-	51	80.361	Gasterosteus_aculeatus
ENSPLAG00000004526	-	55	60.638	ENSGGOG00000001508	SRRT	93	52.812	Gorilla_gorilla
ENSPLAG00000004526	-	96	53.333	ENSHGLG00000008344	Srrt	93	52.491	Heterocephalus_glaber_female
ENSPLAG00000004526	-	96	53.828	ENSHGLG00100018857	Srrt	93	52.876	Heterocephalus_glaber_male
ENSPLAG00000004526	-	98	56.265	ENSHCOG00000005403	srrt	92	54.789	Hippocampus_comes
ENSPLAG00000004526	-	93	71.108	ENSHCOG00000008904	-	97	72.383	Hippocampus_comes
ENSPLAG00000004526	-	55	62.313	ENSIPUG00000021150	srrt	74	63.557	Ictalurus_punctatus
ENSPLAG00000004526	-	55	60.638	ENSSTOG00000013776	SRRT	93	52.445	Ictidomys_tridecemlineatus
ENSPLAG00000004526	-	96	53.333	ENSJJAG00000010446	Srrt	89	57.143	Jaculus_jaculus
ENSPLAG00000004526	-	94	56.944	ENSKMAG00000013599	srrt	92	56.122	Kryptolebias_marmoratus
ENSPLAG00000004526	-	93	74.663	ENSKMAG00000008468	-	93	73.934	Kryptolebias_marmoratus
ENSPLAG00000004526	-	96	56.106	ENSLBEG00000016308	srrt	92	54.580	Labrus_bergylta
ENSPLAG00000004526	-	63	64.415	ENSLBEG00000028983	-	97	65.056	Labrus_bergylta
ENSPLAG00000004526	-	94	47.167	ENSLACG00000001089	SRRT	92	46.758	Latimeria_chalumnae
ENSPLAG00000004526	-	75	63.580	ENSLOCG00000013658	srrt	84	54.305	Lepisosteus_oculatus
ENSPLAG00000004526	-	55	60.465	ENSLAFG00000007725	SRRT	93	52.683	Loxodonta_africana
ENSPLAG00000004526	-	55	60.638	ENSMFAG00000033745	SRRT	97	51.928	Macaca_fascicularis
ENSPLAG00000004526	-	55	60.465	ENSMMUG00000021255	SRRT	93	52.555	Macaca_mulatta
ENSPLAG00000004526	-	55	60.465	ENSMNEG00000041864	SRRT	94	51.928	Macaca_nemestrina
ENSPLAG00000004526	-	55	60.638	ENSMLEG00000029479	SRRT	95	51.928	Mandrillus_leucophaeus
ENSPLAG00000004526	-	55	62.554	ENSMAMG00000014311	srrt	52	63.341	Mastacembelus_armatus
ENSPLAG00000004526	-	93	76.084	ENSMAMG00000010681	-	93	75.249	Mastacembelus_armatus
ENSPLAG00000004526	-	93	75.277	ENSMZEG00005028002	-	98	75.822	Maylandia_zebra
ENSPLAG00000004526	-	55	60.254	ENSMAUG00000011386	Srrt	93	53.350	Mesocricetus_auratus
ENSPLAG00000004526	-	55	60.677	ENSMICG00000009471	SRRT	95	51.981	Microcebus_murinus
ENSPLAG00000004526	-	55	60.042	ENSMOCG00000001971	Srrt	93	53.171	Microtus_ochrogaster
ENSPLAG00000004526	-	82	72.039	ENSMMOG00000011137	-	88	71.625	Mola_mola
ENSPLAG00000004526	-	95	56.899	ENSMMOG00000016399	srrt	92	55.471	Mola_mola
ENSPLAG00000004526	-	55	57.950	ENSMODG00000004862	SRRT	89	58.420	Monodelphis_domestica
ENSPLAG00000004526	-	69	55.574	ENSMALG00000005567	-	100	53.691	Monopterus_albus
ENSPLAG00000004526	-	55	61.123	MGP_CAROLIEiJ_G0027870	Srrt	99	55.435	Mus_caroli
ENSPLAG00000004526	-	55	61.123	ENSMUSG00000037364	Srrt	99	55.435	Mus_musculus
ENSPLAG00000004526	-	55	61.123	MGP_PahariEiJ_G0024456	Srrt	99	55.435	Mus_pahari
ENSPLAG00000004526	-	55	61.123	MGP_SPRETEiJ_G0028875	Srrt	99	55.435	Mus_spretus
ENSPLAG00000004526	-	96	53.114	ENSMPUG00000015839	SRRT	93	52.068	Mustela_putorius_furo
ENSPLAG00000004526	-	55	60.042	ENSMLUG00000009975	SRRT	93	52.798	Myotis_lucifugus
ENSPLAG00000004526	-	55	60.042	ENSNGAG00000023715	Srrt	100	53.495	Nannospalax_galili
ENSPLAG00000004526	-	55	62.419	ENSNBRG00000019100	srrt	92	53.374	Neolamprologus_brichardi
ENSPLAG00000004526	-	95	50.361	ENSNLEG00000011987	SRRT	97	50.628	Nomascus_leucogenys
ENSPLAG00000004526	-	94	45.444	ENSMEUG00000011941	SRRT	52	50.522	Notamacropus_eugenii
ENSPLAG00000004526	-	65	59.398	ENSOPRG00000002502	-	67	57.252	Ochotona_princeps
ENSPLAG00000004526	-	55	61.771	ENSODEG00000016856	SRRT	92	53.951	Octodon_degus
ENSPLAG00000004526	-	93	75.215	ENSONIG00000016080	-	93	74.601	Oreochromis_niloticus
ENSPLAG00000004526	-	96	56.110	ENSOMEG00000003155	srrt	92	55.627	Oryzias_melastigma
ENSPLAG00000004526	-	98	76.341	ENSOMEG00000006963	-	98	76.220	Oryzias_melastigma
ENSPLAG00000004526	-	55	60.677	ENSOGAG00000017242	SRRT	93	52.842	Otolemur_garnettii
ENSPLAG00000004526	-	55	60.638	ENSOARG00000015645	SRRT	93	52.676	Ovis_aries
ENSPLAG00000004526	-	55	60.638	ENSPPAG00000041090	SRRT	93	52.876	Pan_paniscus
ENSPLAG00000004526	-	55	60.851	ENSPPRG00000009557	SRRT	93	52.387	Panthera_pardus
ENSPLAG00000004526	-	96	53.231	ENSPTIG00000014355	SRRT	93	52.311	Panthera_tigris_altaica
ENSPLAG00000004526	-	55	60.638	ENSPTRG00000019511	SRRT	98	51.025	Pan_troglodytes
ENSPLAG00000004526	-	55	59.252	ENSPANG00000020763	SRRT	94	51.928	Papio_anubis
ENSPLAG00000004526	-	94	55.168	ENSPKIG00000022212	-	93	54.356	Paramormyrops_kingsleyae
ENSPLAG00000004526	-	96	56.265	ENSPKIG00000005434	srrt	54	63.441	Paramormyrops_kingsleyae
ENSPLAG00000004526	-	56	58.936	ENSPSIG00000016311	SRRT	93	52.340	Pelodiscus_sinensis
ENSPLAG00000004526	-	96	55.831	ENSPMGG00000002841	srrt	92	56.051	Periophthalmus_magnuspinnatus
ENSPLAG00000004526	-	55	61.123	ENSPEMG00000010834	Srrt	92	53.827	Peromyscus_maniculatus_bairdii
ENSPLAG00000004526	-	96	50.238	ENSPMAG00000009614	-	55	58.193	Petromyzon_marinus
ENSPLAG00000004526	-	55	59.916	ENSPCIG00000000816	SRRT	93	51.515	Phascolarctos_cinereus
ENSPLAG00000004526	-	55	64.935	ENSPFOG00000005704	srrt	52	64.719	Poecilia_formosa
ENSPLAG00000004526	-	100	98.776	ENSPFOG00000016554	-	100	98.776	Poecilia_formosa
ENSPLAG00000004526	-	80	64.086	ENSPMEG00000001182	srrt	82	63.871	Poecilia_mexicana
ENSPLAG00000004526	-	97	98.739	ENSPMEG00000001520	-	100	98.739	Poecilia_mexicana
ENSPLAG00000004526	-	94	55.875	ENSPREG00000022308	srrt	52	64.935	Poecilia_reticulata
ENSPLAG00000004526	-	55	58.212	ENSPCAG00000001621	SRRT	93	50.481	Procavia_capensis
ENSPLAG00000004526	-	55	60.851	ENSPCOG00000025751	SRRT	93	52.798	Propithecus_coquereli
ENSPLAG00000004526	-	63	59.722	ENSPVAG00000000834	SRRT	79	60.274	Pteropus_vampyrus
ENSPLAG00000004526	-	65	61.644	ENSPNAG00000010629	srrt	65	55.556	Pygocentrus_nattereri
ENSPLAG00000004526	-	55	50.855	ENSRNOG00000048277	AABR07035787.1	92	50.641	Rattus_norvegicus
ENSPLAG00000004526	-	55	60.465	ENSRBIG00000035718	SRRT	94	51.928	Rhinopithecus_bieti
ENSPLAG00000004526	-	55	60.465	ENSRROG00000030622	SRRT	95	51.928	Rhinopithecus_roxellana
ENSPLAG00000004526	-	55	60.638	ENSSBOG00000033570	SRRT	94	53.121	Saimiri_boliviensis_boliviensis
ENSPLAG00000004526	-	56	58.350	ENSSHAG00000007349	-	74	60.084	Sarcophilus_harrisii
ENSPLAG00000004526	-	55	65.152	ENSSFOG00015017293	srrt	51	64.859	Scleropages_formosus
ENSPLAG00000004526	-	81	72.353	ENSSMAG00000018195	-	97	69.927	Scophthalmus_maximus
ENSPLAG00000004526	-	94	56.692	ENSSMAG00000015342	srrt	92	55.754	Scophthalmus_maximus
ENSPLAG00000004526	-	55	63.715	ENSSDUG00000012049	srrt	92	54.523	Seriola_dumerili
ENSPLAG00000004526	-	56	65.116	ENSSDUG00000002051	-	94	64.946	Seriola_dumerili
ENSPLAG00000004526	-	94	55.459	ENSSLDG00000017477	srrt	83	63.974	Seriola_lalandi_dorsalis
ENSPLAG00000004526	-	85	74.366	ENSSPAG00000018943	-	97	74.460	Stegastes_partitus
ENSPLAG00000004526	-	51	61.036	ENSSSCG00000024789	SRRT	98	51.241	Sus_scrofa
ENSPLAG00000004526	-	55	61.915	ENSTRUG00000016075	srrt	93	51.695	Takifugu_rubripes
ENSPLAG00000004526	-	90	73.740	ENSTRUG00000000023	-	94	74.160	Takifugu_rubripes
ENSPLAG00000004526	-	73	52.214	ENSTNIG00000011779	srrt	100	51.290	Tetraodon_nigroviridis
ENSPLAG00000004526	-	93	66.176	ENSTNIG00000003111	-	93	67.813	Tetraodon_nigroviridis
ENSPLAG00000004526	-	55	60.465	ENSTTRG00000011104	SRRT	93	52.663	Tursiops_truncatus
ENSPLAG00000004526	-	55	60.465	ENSUAMG00000027997	SRRT	95	52.068	Ursus_americanus
ENSPLAG00000004526	-	55	60.465	ENSUMAG00000011295	SRRT	93	52.068	Ursus_maritimus
ENSPLAG00000004526	-	96	53.231	ENSVVUG00000023572	SRRT	93	52.237	Vulpes_vulpes
ENSPLAG00000004526	-	96	48.109	ENSXETG00000025124	srrt	92	47.439	Xenopus_tropicalis
ENSPLAG00000004526	-	59	75.876	ENSXCOG00000013105	-	91	79.065	Xiphophorus_couchianus
ENSPLAG00000004526	-	55	64.935	ENSXMAG00000007627	srrt	92	56.186	Xiphophorus_maculatus
ENSPLAG00000004526	-	100	96.112	ENSXMAG00000002090	-	100	96.112	Xiphophorus_maculatus