EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000004541 (Gene tree)
Gene ID: 106949945
Gene Symbol: rbm46
Alias: -
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 16393 bases
Position: chrKQ545686.1:70969-87361
Accession: 106949945
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000003132	DND1_DSRM	PF14709.7	1.2e-19	1	1
ENSPLAP00000003132	RRM_1	PF00076.22	3.1e-37	1	3
ENSPLAP00000003132	RRM_1	PF00076.22	3.1e-37	2	3
ENSPLAP00000003132	RRM_1	PF00076.22	3.1e-37	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000011881	-	4365	XM_015036504	ENSPLAP00000003132	561 (aa)	XP_014891990	UPI00072EC52B

Gene Model

Click here to download ENSPLAG00000004541's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000004541's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000004541	rbm46	51	55.862	ENSPLAG00000015448	syncripl	53	55.172
ENSPLAG00000004541	rbm46	70	67.361	ENSPLAG00000000026	a1cf	86	66.102
ENSPLAG00000004541	rbm46	54	67.213	ENSPLAG00000002072	rbm47	55	68.990
ENSPLAG00000004541	rbm46	70	67.361	ENSPLAG00000001210	-	86	66.102

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000004541	rbm46	98	57.219	ENSG00000151962	RBM46	99	73.381	Homo_sapiens
ENSPLAG00000004541	rbm46	79	80.266	ENSAPOG00000009209	rbm46	89	80.266	Acanthochromis_polyacanthus
ENSPLAG00000004541	rbm46	98	58.156	ENSAMEG00000013290	RBM46	94	60.155	Ailuropoda_melanoleuca
ENSPLAG00000004541	rbm46	81	74.678	ENSACIG00000014500	rbm46	90	74.359	Amphilophus_citrinellus
ENSPLAG00000004541	rbm46	93	77.213	ENSAOCG00000001892	-	100	77.213	Amphiprion_ocellaris
ENSPLAG00000004541	rbm46	78	79.910	ENSAPEG00000017762	rbm46	97	79.910	Amphiprion_percula
ENSPLAG00000004541	rbm46	97	69.636	ENSATEG00000010775	rbm46	100	68.165	Anabas_testudineus
ENSPLAG00000004541	rbm46	79	65.859	ENSAPLG00000005116	RBM46	97	65.859	Anas_platyrhynchos
ENSPLAG00000004541	rbm46	94	58.209	ENSACAG00000015599	RBM46	97	58.256	Anolis_carolinensis
ENSPLAG00000004541	rbm46	98	58.111	ENSANAG00000029193	RBM46	99	63.732	Aotus_nancymaae
ENSPLAG00000004541	rbm46	98	75.000	ENSACLG00000016153	rbm46	99	74.695	Astatotilapia_calliptera
ENSPLAG00000004541	rbm46	79	70.721	ENSAMXG00000009397	rbm46	97	70.721	Astyanax_mexicanus
ENSPLAG00000004541	rbm46	93	62.500	ENSAMXG00000020892	-	91	65.306	Astyanax_mexicanus
ENSPLAG00000004541	rbm46	89	61.297	ENSBTAG00000001696	RBM46	96	63.389	Bos_taurus
ENSPLAG00000004541	rbm46	98	57.398	ENSCJAG00000001768	RBM46	99	62.893	Callithrix_jacchus
ENSPLAG00000004541	rbm46	98	58.333	ENSCAFG00000008473	RBM46	96	62.971	Canis_familiaris
ENSPLAG00000004541	rbm46	98	58.333	ENSCAFG00020002468	RBM46	96	62.319	Canis_lupus_dingo
ENSPLAG00000004541	rbm46	98	57.398	ENSCHIG00000000502	RBM46	96	63.389	Capra_hircus
ENSPLAG00000004541	rbm46	83	62.994	ENSTSYG00000010435	RBM46	99	62.683	Carlito_syrichta
ENSPLAG00000004541	rbm46	53	77.966	ENSCAPG00000011841	-	79	78.231	Cavia_aperea
ENSPLAG00000004541	rbm46	83	62.162	ENSCAPG00000011928	-	96	62.762	Cavia_aperea
ENSPLAG00000004541	rbm46	98	57.041	ENSCPOG00000019272	-	94	58.994	Cavia_porcellus
ENSPLAG00000004541	rbm46	80	64.989	ENSCPOG00000020396	-	90	64.989	Cavia_porcellus
ENSPLAG00000004541	rbm46	98	57.398	ENSCPOG00000010284	-	99	62.683	Cavia_porcellus
ENSPLAG00000004541	rbm46	98	57.932	ENSCCAG00000027619	-	99	63.103	Cebus_capucinus
ENSPLAG00000004541	rbm46	98	48.668	ENSCCAG00000001323	-	98	52.510	Cebus_capucinus
ENSPLAG00000004541	rbm46	83	62.971	ENSCATG00000040148	RBM46	99	62.893	Cercocebus_atys
ENSPLAG00000004541	rbm46	83	62.448	ENSCLAG00000011886	-	90	62.319	Chinchilla_lanigera
ENSPLAG00000004541	rbm46	98	57.810	ENSCLAG00000005846	-	99	63.214	Chinchilla_lanigera
ENSPLAG00000004541	rbm46	98	57.398	ENSCSAG00000003263	RBM46	99	56.790	Chlorocebus_sabaeus
ENSPLAG00000004541	rbm46	98	57.194	ENSCHOG00000003429	RBM46	99	57.168	Choloepus_hoffmanni
ENSPLAG00000004541	rbm46	74	65.802	ENSCPBG00000009314	RBM46	92	65.802	Chrysemys_picta_bellii
ENSPLAG00000004541	rbm46	83	63.180	ENSCANG00000039065	RBM46	99	63.103	Colobus_angolensis_palliatus
ENSPLAG00000004541	rbm46	98	58.645	ENSCGRG00001016714	Rbm46	99	63.522	Cricetulus_griseus_chok1gshd
ENSPLAG00000004541	rbm46	98	58.645	ENSCGRG00000011738	Rbm46	99	63.522	Cricetulus_griseus_crigri
ENSPLAG00000004541	rbm46	98	57.840	ENSCSEG00000005530	rbm46	96	65.766	Cynoglossus_semilaevis
ENSPLAG00000004541	rbm46	80	78.834	ENSCVAG00000021013	rbm46	95	78.834	Cyprinodon_variegatus
ENSPLAG00000004541	rbm46	95	64.338	ENSDARG00000079452	rbm46	99	63.889	Danio_rerio
ENSPLAG00000004541	rbm46	98	58.156	ENSDNOG00000016195	RBM46	99	56.790	Dasypus_novemcinctus
ENSPLAG00000004541	rbm46	98	57.576	ENSDORG00000006405	Rbm46	99	63.312	Dipodomys_ordii
ENSPLAG00000004541	rbm46	98	56.890	ENSETEG00000014902	RBM46	87	62.683	Echinops_telfairi
ENSPLAG00000004541	rbm46	98	57.932	ENSEASG00005015821	RBM46	99	56.790	Equus_asinus_asinus
ENSPLAG00000004541	rbm46	83	63.202	ENSECAG00000007649	RBM46	96	62.971	Equus_caballus
ENSPLAG00000004541	rbm46	98	56.206	ENSEEUG00000011824	RBM46	94	58.414	Erinaceus_europaeus
ENSPLAG00000004541	rbm46	66	71.277	ENSELUG00000008166	rbm46	97	71.809	Esox_lucius
ENSPLAG00000004541	rbm46	98	58.333	ENSFCAG00000029812	RBM46	99	62.893	Felis_catus
ENSPLAG00000004541	rbm46	84	62.292	ENSFALG00000013157	RBM46	99	59.570	Ficedula_albicollis
ENSPLAG00000004541	rbm46	98	56.328	ENSFDAG00000019281	-	94	59.188	Fukomys_damarensis
ENSPLAG00000004541	rbm46	83	61.392	ENSFDAG00000006445	-	92	61.392	Fukomys_damarensis
ENSPLAG00000004541	rbm46	69	85.530	ENSFHEG00000013257	rbm46	87	85.530	Fundulus_heteroclitus
ENSPLAG00000004541	rbm46	80	59.307	ENSGALG00000009278	RBM46	96	59.307	Gallus_gallus
ENSPLAG00000004541	rbm46	93	75.096	ENSGAFG00000020245	rbm46	100	75.096	Gambusia_affinis
ENSPLAG00000004541	rbm46	83	63.291	ENSGAGG00000002019	RBM46	87	64.629	Gopherus_agassizii
ENSPLAG00000004541	rbm46	98	57.398	ENSGGOG00000001876	RBM46	99	63.103	Gorilla_gorilla
ENSPLAG00000004541	rbm46	83	72.845	ENSHBUG00000009609	rbm46	99	77.042	Haplochromis_burtoni
ENSPLAG00000004541	rbm46	80	62.664	ENSHGLG00000002463	-	99	63.657	Heterocephalus_glaber_female
ENSPLAG00000004541	rbm46	78	57.883	ENSHGLG00000010742	-	85	56.751	Heterocephalus_glaber_female
ENSPLAG00000004541	rbm46	90	51.562	ENSHGLG00000002940	-	96	51.562	Heterocephalus_glaber_female
ENSPLAG00000004541	rbm46	98	56.738	ENSHGLG00100012752	-	99	62.264	Heterocephalus_glaber_male
ENSPLAG00000004541	rbm46	78	57.883	ENSHGLG00100004977	-	85	56.751	Heterocephalus_glaber_male
ENSPLAG00000004541	rbm46	90	47.969	ENSHGLG00100018987	-	96	47.969	Heterocephalus_glaber_male
ENSPLAG00000004541	rbm46	79	55.856	ENSHCOG00000012998	rbm46	92	54.585	Hippocampus_comes
ENSPLAG00000004541	rbm46	81	67.500	ENSIPUG00000024038	rbm46	94	68.936	Ictalurus_punctatus
ENSPLAG00000004541	rbm46	98	58.467	ENSSTOG00000007918	RBM46	99	63.312	Ictidomys_tridecemlineatus
ENSPLAG00000004541	rbm46	83	64.435	ENSJJAG00000003902	Rbm46	99	63.941	Jaculus_jaculus
ENSPLAG00000004541	rbm46	98	76.364	ENSKMAG00000015127	rbm46	99	76.727	Kryptolebias_marmoratus
ENSPLAG00000004541	rbm46	96	59.381	ENSLACG00000002062	RBM46	97	60.297	Latimeria_chalumnae
ENSPLAG00000004541	rbm46	95	64.193	ENSLOCG00000008298	rbm46	97	69.011	Lepisosteus_oculatus
ENSPLAG00000004541	rbm46	83	63.485	ENSLAFG00000015448	RBM46	99	63.103	Loxodonta_africana
ENSPLAG00000004541	rbm46	83	63.180	ENSMFAG00000043485	RBM46	99	63.103	Macaca_fascicularis
ENSPLAG00000004541	rbm46	83	63.180	ENSMMUG00000021147	RBM46	96	63.180	Macaca_mulatta
ENSPLAG00000004541	rbm46	83	63.180	ENSMNEG00000002787	RBM46	99	63.103	Macaca_nemestrina
ENSPLAG00000004541	rbm46	83	62.971	ENSMLEG00000029756	RBM46	99	62.893	Mandrillus_leucophaeus
ENSPLAG00000004541	rbm46	79	81.900	ENSMAMG00000009093	rbm46	99	73.764	Mastacembelus_armatus
ENSPLAG00000004541	rbm46	80	79.646	ENSMZEG00005027849	rbm46	94	80.088	Maylandia_zebra
ENSPLAG00000004541	rbm46	80	59.524	ENSMGAG00000001457	RBM46	97	59.524	Meleagris_gallopavo
ENSPLAG00000004541	rbm46	98	58.645	ENSMAUG00000009911	Rbm46	99	63.522	Mesocricetus_auratus
ENSPLAG00000004541	rbm46	98	58.111	ENSMICG00000042747	RBM46	99	62.893	Microcebus_murinus
ENSPLAG00000004541	rbm46	98	58.467	ENSMOCG00000001188	Rbm46	99	63.312	Microtus_ochrogaster
ENSPLAG00000004541	rbm46	97	67.690	ENSMMOG00000011214	rbm46	100	68.100	Mola_mola
ENSPLAG00000004541	rbm46	96	54.932	ENSMODG00000001302	RBM46	81	63.291	Monodelphis_domestica
ENSPLAG00000004541	rbm46	79	73.214	ENSMALG00000006185	rbm46	96	73.884	Monopterus_albus
ENSPLAG00000004541	rbm46	98	57.932	MGP_CAROLIEiJ_G0025101	Rbm46	99	63.522	Mus_caroli
ENSPLAG00000004541	rbm46	98	58.111	ENSMUSG00000033882	Rbm46	99	63.732	Mus_musculus
ENSPLAG00000004541	rbm46	98	58.289	MGP_PahariEiJ_G0026544	Rbm46	99	63.732	Mus_pahari
ENSPLAG00000004541	rbm46	98	58.289	MGP_SPRETEiJ_G0026043	Rbm46	99	63.941	Mus_spretus
ENSPLAG00000004541	rbm46	83	63.202	ENSMPUG00000005670	RBM46	96	62.971	Mustela_putorius_furo
ENSPLAG00000004541	rbm46	98	58.363	ENSMLUG00000003221	RBM46	99	56.866	Myotis_lucifugus
ENSPLAG00000004541	rbm46	98	59.002	ENSNGAG00000004231	Rbm46	99	63.941	Nannospalax_galili
ENSPLAG00000004541	rbm46	83	77.586	ENSNBRG00000000273	rbm46	89	77.586	Neolamprologus_brichardi
ENSPLAG00000004541	rbm46	83	62.971	ENSNLEG00000006184	RBM46	99	62.893	Nomascus_leucogenys
ENSPLAG00000004541	rbm46	73	64.066	ENSMEUG00000013328	RBM46	99	63.285	Notamacropus_eugenii
ENSPLAG00000004541	rbm46	52	74.048	ENSOPRG00000007136	RBM46	99	75.433	Ochotona_princeps
ENSPLAG00000004541	rbm46	83	62.971	ENSODEG00000018002	-	92	62.762	Octodon_degus
ENSPLAG00000004541	rbm46	98	57.219	ENSODEG00000000735	-	99	62.893	Octodon_degus
ENSPLAG00000004541	rbm46	78	76.000	ENSONIG00000014096	rbm46	97	75.330	Oreochromis_niloticus
ENSPLAG00000004541	rbm46	80	64.642	ENSOANG00000002141	RBM46	93	64.642	Ornithorhynchus_anatinus
ENSPLAG00000004541	rbm46	98	57.932	ENSOCUG00000017859	RBM46	94	60.348	Oryctolagus_cuniculus
ENSPLAG00000004541	rbm46	84	73.859	ENSORLG00000002429	rbm46	99	68.301	Oryzias_latipes
ENSPLAG00000004541	rbm46	84	74.792	ENSORLG00020022154	rbm46	99	69.326	Oryzias_latipes_hni
ENSPLAG00000004541	rbm46	84	73.967	ENSORLG00015020234	rbm46	97	74.538	Oryzias_latipes_hsok
ENSPLAG00000004541	rbm46	78	75.223	ENSOMEG00000022580	rbm46	100	69.403	Oryzias_melastigma
ENSPLAG00000004541	rbm46	98	58.333	ENSOGAG00000005647	RBM46	99	56.614	Otolemur_garnettii
ENSPLAG00000004541	rbm46	98	57.219	ENSOARG00000016406	RBM46	96	63.180	Ovis_aries
ENSPLAG00000004541	rbm46	83	63.180	ENSPPAG00000043236	RBM46	99	63.103	Pan_paniscus
ENSPLAG00000004541	rbm46	98	58.333	ENSPPRG00000009416	RBM46	99	62.683	Panthera_pardus
ENSPLAG00000004541	rbm46	98	58.333	ENSPTIG00000017449	RBM46	99	62.683	Panthera_tigris_altaica
ENSPLAG00000004541	rbm46	83	63.180	ENSPTRG00000016538	RBM46	99	63.103	Pan_troglodytes
ENSPLAG00000004541	rbm46	98	57.398	ENSPANG00000004186	RBM46	99	63.103	Papio_anubis
ENSPLAG00000004541	rbm46	94	63.197	ENSPKIG00000015334	rbm46	82	68.432	Paramormyrops_kingsleyae
ENSPLAG00000004541	rbm46	79	64.425	ENSPSIG00000006429	RBM46	92	64.425	Pelodiscus_sinensis
ENSPLAG00000004541	rbm46	82	71.212	ENSPMGG00000019872	rbm46	94	88.321	Periophthalmus_magnuspinnatus
ENSPLAG00000004541	rbm46	98	58.645	ENSPEMG00000013899	Rbm46	99	63.522	Peromyscus_maniculatus_bairdii
ENSPLAG00000004541	rbm46	96	59.206	ENSPCIG00000029626	RBM46	96	64.103	Phascolarctos_cinereus
ENSPLAG00000004541	rbm46	82	79.775	ENSPFOG00000001079	rbm46	98	79.775	Poecilia_formosa
ENSPLAG00000004541	rbm46	100	99.822	ENSPMEG00000015724	rbm46	100	99.822	Poecilia_mexicana
ENSPLAG00000004541	rbm46	100	99.644	ENSPREG00000014464	rbm46	100	99.644	Poecilia_reticulata
ENSPLAG00000004541	rbm46	98	58.007	ENSPPYG00000015144	RBM46	94	60.348	Pongo_abelii
ENSPLAG00000004541	rbm46	96	55.455	ENSPCAG00000003110	RBM46	93	58.383	Procavia_capensis
ENSPLAG00000004541	rbm46	98	56.506	ENSPCOG00000024347	RBM46	99	62.474	Propithecus_coquereli
ENSPLAG00000004541	rbm46	98	57.979	ENSPVAG00000008376	RBM46	99	56.261	Pteropus_vampyrus
ENSPLAG00000004541	rbm46	93	65.273	ENSPNAG00000025312	rbm46	99	64.674	Pygocentrus_nattereri
ENSPLAG00000004541	rbm46	98	58.645	ENSRNOG00000025823	Rbm46	99	57.143	Rattus_norvegicus
ENSPLAG00000004541	rbm46	83	63.312	ENSRBIG00000032583	RBM46	99	62.683	Rhinopithecus_bieti
ENSPLAG00000004541	rbm46	83	63.103	ENSRROG00000044288	RBM46	99	62.474	Rhinopithecus_roxellana
ENSPLAG00000004541	rbm46	98	57.932	ENSSBOG00000033028	RBM46	99	63.103	Saimiri_boliviensis_boliviensis
ENSPLAG00000004541	rbm46	96	59.025	ENSSHAG00000012596	RBM46	99	57.092	Sarcophilus_harrisii
ENSPLAG00000004541	rbm46	94	63.227	ENSSFOG00015000087	rbm46	89	68.162	Scleropages_formosus
ENSPLAG00000004541	rbm46	79	71.300	ENSSMAG00000017042	rbm46	94	71.300	Scophthalmus_maximus
ENSPLAG00000004541	rbm46	92	76.838	ENSSDUG00000020645	rbm46	92	80.086	Seriola_dumerili
ENSPLAG00000004541	rbm46	98	57.270	ENSSARG00000006520	RBM46	99	56.437	Sorex_araneus
ENSPLAG00000004541	rbm46	94	58.333	ENSSPUG00000012525	-	85	64.770	Sphenodon_punctatus
ENSPLAG00000004541	rbm46	83	64.135	ENSSPUG00000004773	-	98	64.059	Sphenodon_punctatus
ENSPLAG00000004541	rbm46	81	76.159	ENSSPAG00000013697	rbm46	96	76.159	Stegastes_partitus
ENSPLAG00000004541	rbm46	84	62.578	ENSSSCG00000008994	RBM46	96	62.971	Sus_scrofa
ENSPLAG00000004541	rbm46	78	64.302	ENSTGUG00000005307	RBM46	95	64.302	Taeniopygia_guttata
ENSPLAG00000004541	rbm46	84	71.247	ENSTRUG00000004237	rbm46	98	70.417	Takifugu_rubripes
ENSPLAG00000004541	rbm46	81	70.716	ENSTNIG00000008714	rbm46	97	66.216	Tetraodon_nigroviridis
ENSPLAG00000004541	rbm46	98	56.738	ENSTBEG00000013949	RBM46	99	56.119	Tupaia_belangeri
ENSPLAG00000004541	rbm46	98	58.645	ENSTTRG00000001239	RBM46	99	58.025	Tursiops_truncatus
ENSPLAG00000004541	rbm46	98	57.447	ENSUAMG00000026593	RBM46	96	62.971	Ursus_americanus
ENSPLAG00000004541	rbm46	98	57.447	ENSUMAG00000016442	RBM46	96	63.598	Ursus_maritimus
ENSPLAG00000004541	rbm46	98	58.333	ENSVVUG00000024957	RBM46	99	62.893	Vulpes_vulpes
ENSPLAG00000004541	rbm46	84	44.239	ENSXETG00000032344	-	89	44.583	Xenopus_tropicalis
ENSPLAG00000004541	rbm46	82	61.734	ENSXETG00000022412	-	88	61.864	Xenopus_tropicalis
ENSPLAG00000004541	rbm46	56	64.013	ENSXETG00000032067	-	83	66.134	Xenopus_tropicalis
ENSPLAG00000004541	rbm46	81	86.170	ENSXMAG00000008237	rbm46	92	86.170	Xiphophorus_maculatus