EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000004646 (Gene tree)
Gene ID: 106937905
Gene Symbol: POP1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 15077 bases
Position: chrKQ547765.1:22539-37615
Accession: 106937905
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000003217	POP1	PF06978.11	1.6e-35	1	2
ENSPLAP00000003217	POP1	PF06978.11	1.6e-35	2	2
ENSPLAP00000003217	POPLD	PF08170.12	7.1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000011748	POP1-201	3758	XM_015019647	ENSPLAP00000003217	958 (aa)	XP_014875133	UPI00072E3BF9

Gene Model

Click here to download ENSPLAG00000004646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000004646's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000004646	POP1	100	48.073	ENSG00000104356	POP1	100	48.607	Homo_sapiens
ENSPLAG00000004646	POP1	100	73.711	ENSAPOG00000008198	pop1	100	73.711	Acanthochromis_polyacanthus
ENSPLAG00000004646	POP1	100	48.062	ENSAMEG00000000556	POP1	100	48.062	Ailuropoda_melanoleuca
ENSPLAG00000004646	POP1	100	67.275	ENSACIG00000004169	POP1	100	66.768	Amphilophus_citrinellus
ENSPLAG00000004646	POP1	100	73.684	ENSAOCG00000010991	pop1	100	73.684	Amphiprion_ocellaris
ENSPLAG00000004646	POP1	100	67.335	ENSAPEG00000007607	pop1	100	67.100	Amphiprion_percula
ENSPLAG00000004646	POP1	100	70.281	ENSATEG00000024814	POP1	100	70.683	Anabas_testudineus
ENSPLAG00000004646	POP1	94	49.947	ENSAPLG00000014418	POP1	99	50.053	Anas_platyrhynchos
ENSPLAG00000004646	POP1	100	47.104	ENSACAG00000016083	POP1	100	47.217	Anolis_carolinensis
ENSPLAG00000004646	POP1	87	54.242	ENSANAG00000026360	POP1	99	54.242	Aotus_nancymaae
ENSPLAG00000004646	POP1	100	70.493	ENSACLG00000010951	pop1	100	70.493	Astatotilapia_calliptera
ENSPLAG00000004646	POP1	100	56.028	ENSAMXG00000014483	POP1	100	56.028	Astyanax_mexicanus
ENSPLAG00000004646	POP1	100	48.084	ENSBTAG00000012596	POP1	100	48.219	Bos_taurus
ENSPLAG00000004646	POP1	100	48.058	ENSCJAG00000015567	POP1	100	48.635	Callithrix_jacchus
ENSPLAG00000004646	POP1	100	49.002	ENSCAFG00000000469	POP1	100	49.002	Canis_familiaris
ENSPLAG00000004646	POP1	100	47.957	ENSCAFG00020026765	POP1	100	47.957	Canis_lupus_dingo
ENSPLAG00000004646	POP1	94	52.446	ENSCHIG00000017066	POP1	100	48.558	Capra_hircus
ENSPLAG00000004646	POP1	100	47.404	ENSTSYG00000003097	POP1	100	47.683	Carlito_syrichta
ENSPLAG00000004646	POP1	100	46.236	ENSCAPG00000007251	POP1	100	46.236	Cavia_aperea
ENSPLAG00000004646	POP1	100	46.996	ENSCPOG00000002901	POP1	100	46.996	Cavia_porcellus
ENSPLAG00000004646	POP1	100	48.778	ENSCCAG00000018939	POP1	100	48.974	Cebus_capucinus
ENSPLAG00000004646	POP1	100	48.703	ENSCATG00000040916	POP1	100	48.703	Cercocebus_atys
ENSPLAG00000004646	POP1	100	46.821	ENSCLAG00000007208	POP1	97	47.241	Chinchilla_lanigera
ENSPLAG00000004646	POP1	91	50.267	ENSCSAG00000012340	POP1	98	50.431	Chlorocebus_sabaeus
ENSPLAG00000004646	POP1	93	47.083	ENSCHOG00000011432	POP1	96	47.435	Choloepus_hoffmanni
ENSPLAG00000004646	POP1	100	49.508	ENSCPBG00000006373	POP1	100	50.294	Chrysemys_picta_bellii
ENSPLAG00000004646	POP1	84	33.208	ENSCING00000008323	-	89	32.830	Ciona_intestinalis
ENSPLAG00000004646	POP1	100	48.654	ENSCANG00000001647	POP1	100	48.654	Colobus_angolensis_palliatus
ENSPLAG00000004646	POP1	100	46.139	ENSCGRG00001017308	Pop1	100	46.332	Cricetulus_griseus_chok1gshd
ENSPLAG00000004646	POP1	100	43.799	ENSCGRG00000010824	Pop1	100	44.181	Cricetulus_griseus_crigri
ENSPLAG00000004646	POP1	100	67.003	ENSCSEG00000008737	POP1	100	67.003	Cynoglossus_semilaevis
ENSPLAG00000004646	POP1	100	77.744	ENSCVAG00000022248	pop1	100	77.744	Cyprinodon_variegatus
ENSPLAG00000004646	POP1	53	53.755	ENSDARG00000102087	pop1	98	54.545	Danio_rerio
ENSPLAG00000004646	POP1	100	45.336	ENSDNOG00000019974	POP1	100	45.548	Dasypus_novemcinctus
ENSPLAG00000004646	POP1	100	41.715	ENSDORG00000015384	Pop1	100	42.442	Dipodomys_ordii
ENSPLAG00000004646	POP1	88	46.540	ENSETEG00000007839	POP1	88	46.540	Echinops_telfairi
ENSPLAG00000004646	POP1	100	47.440	ENSEASG00005003189	POP1	98	48.058	Equus_asinus_asinus
ENSPLAG00000004646	POP1	100	48.109	ENSECAG00000024236	POP1	100	48.303	Equus_caballus
ENSPLAG00000004646	POP1	51	69.512	ENSEEUG00000003050	-	53	78.788	Erinaceus_europaeus
ENSPLAG00000004646	POP1	100	61.179	ENSELUG00000003526	pop1	100	61.687	Esox_lucius
ENSPLAG00000004646	POP1	100	47.919	ENSFCAG00000002168	POP1	100	47.919	Felis_catus
ENSPLAG00000004646	POP1	100	47.099	ENSFALG00000005711	POP1	100	47.485	Ficedula_albicollis
ENSPLAG00000004646	POP1	100	46.776	ENSFDAG00000017068	POP1	100	46.968	Fukomys_damarensis
ENSPLAG00000004646	POP1	100	77.607	ENSFHEG00000019518	pop1	100	77.607	Fundulus_heteroclitus
ENSPLAG00000004646	POP1	100	58.941	ENSGMOG00000000659	POP1	100	58.442	Gadus_morhua
ENSPLAG00000004646	POP1	100	92.701	ENSGAFG00000019770	POP1	100	92.701	Gambusia_affinis
ENSPLAG00000004646	POP1	96	70.556	ENSGACG00000003499	pop1	92	70.285	Gasterosteus_aculeatus
ENSPLAG00000004646	POP1	100	48.930	ENSGAGG00000011737	POP1	98	49.128	Gopherus_agassizii
ENSPLAG00000004646	POP1	100	48.120	ENSGGOG00000003176	POP1	100	48.511	Gorilla_gorilla
ENSPLAG00000004646	POP1	100	70.393	ENSHBUG00000021583	pop1	100	70.896	Haplochromis_burtoni
ENSPLAG00000004646	POP1	100	46.257	ENSHGLG00000006029	POP1	100	46.673	Heterocephalus_glaber_female
ENSPLAG00000004646	POP1	100	46.257	ENSHGLG00100016879	POP1	100	46.673	Heterocephalus_glaber_male
ENSPLAG00000004646	POP1	100	62.249	ENSHCOG00000013888	pop1	100	61.847	Hippocampus_comes
ENSPLAG00000004646	POP1	99	55.653	ENSIPUG00000018336	pop1	100	55.599	Ictalurus_punctatus
ENSPLAG00000004646	POP1	100	47.246	ENSSTOG00000011455	POP1	97	47.246	Ictidomys_tridecemlineatus
ENSPLAG00000004646	POP1	100	46.351	ENSJJAG00000013325	Pop1	100	46.450	Jaculus_jaculus
ENSPLAG00000004646	POP1	100	74.097	ENSKMAG00000001346	POP1	100	74.330	Kryptolebias_marmoratus
ENSPLAG00000004646	POP1	100	64.271	ENSLBEG00000024457	POP1	100	64.066	Labrus_bergylta
ENSPLAG00000004646	POP1	94	50.828	ENSLACG00000012498	POP1	98	51.390	Latimeria_chalumnae
ENSPLAG00000004646	POP1	100	55.176	ENSLOCG00000009817	POP1	100	56.244	Lepisosteus_oculatus
ENSPLAG00000004646	POP1	100	48.088	ENSLAFG00000010770	POP1	100	48.365	Loxodonta_africana
ENSPLAG00000004646	POP1	100	48.088	ENSMFAG00000000347	POP1	100	48.607	Macaca_fascicularis
ENSPLAG00000004646	POP1	100	47.992	ENSMNEG00000036870	POP1	100	48.511	Macaca_nemestrina
ENSPLAG00000004646	POP1	100	48.279	ENSMLEG00000034986	POP1	100	48.799	Mandrillus_leucophaeus
ENSPLAG00000004646	POP1	100	69.534	ENSMAMG00000004040	pop1	100	69.028	Mastacembelus_armatus
ENSPLAG00000004646	POP1	100	70.191	ENSMZEG00005025448	pop1	100	70.695	Maylandia_zebra
ENSPLAG00000004646	POP1	100	46.890	ENSMGAG00000012167	POP1	100	47.042	Meleagris_gallopavo
ENSPLAG00000004646	POP1	100	46.744	ENSMAUG00000017537	Pop1	100	46.744	Mesocricetus_auratus
ENSPLAG00000004646	POP1	100	47.064	ENSMICG00000004361	POP1	100	47.064	Microcebus_murinus
ENSPLAG00000004646	POP1	100	46.558	ENSMOCG00000006356	Pop1	100	46.756	Microtus_ochrogaster
ENSPLAG00000004646	POP1	100	63.646	ENSMMOG00000018242	pop1	100	63.674	Mola_mola
ENSPLAG00000004646	POP1	100	45.733	ENSMODG00000006561	POP1	100	46.073	Monodelphis_domestica
ENSPLAG00000004646	POP1	100	68.882	ENSMALG00000012621	POP1	100	68.844	Monopterus_albus
ENSPLAG00000004646	POP1	100	44.729	MGP_CAROLIEiJ_G0019726	Pop1	100	45.229	Mus_caroli
ENSPLAG00000004646	POP1	100	44.539	ENSMUSG00000022325	Pop1	100	44.943	Mus_musculus
ENSPLAG00000004646	POP1	100	44.573	MGP_PahariEiJ_G0019735	Pop1	100	45.077	Mus_pahari
ENSPLAG00000004646	POP1	100	44.752	MGP_SPRETEiJ_G0020622	Pop1	100	45.254	Mus_spretus
ENSPLAG00000004646	POP1	100	48.123	ENSMPUG00000015250	POP1	100	48.123	Mustela_putorius_furo
ENSPLAG00000004646	POP1	100	46.957	ENSMLUG00000010204	POP1	100	47.110	Myotis_lucifugus
ENSPLAG00000004646	POP1	100	46.169	ENSNGAG00000001582	Pop1	100	46.405	Nannospalax_galili
ENSPLAG00000004646	POP1	100	65.412	ENSNBRG00000002356	pop1	100	65.412	Neolamprologus_brichardi
ENSPLAG00000004646	POP1	100	48.703	ENSNLEG00000002541	POP1	100	48.703	Nomascus_leucogenys
ENSPLAG00000004646	POP1	87	54.142	ENSMEUG00000003118	POP1	90	54.142	Notamacropus_eugenii
ENSPLAG00000004646	POP1	100	47.507	ENSOPRG00000007667	POP1	100	47.507	Ochotona_princeps
ENSPLAG00000004646	POP1	100	46.968	ENSODEG00000003984	POP1	100	47.246	Octodon_degus
ENSPLAG00000004646	POP1	100	70.292	ENSONIG00000016445	pop1	100	70.796	Oreochromis_niloticus
ENSPLAG00000004646	POP1	61	45.924	ENSOANG00000001278	-	94	45.924	Ornithorhynchus_anatinus
ENSPLAG00000004646	POP1	100	46.923	ENSOCUG00000017400	POP1	100	47.019	Oryctolagus_cuniculus
ENSPLAG00000004646	POP1	100	69.825	ENSORLG00000002839	pop1	100	70.443	Oryzias_latipes
ENSPLAG00000004646	POP1	100	64.759	ENSORLG00020022450	POP1	95	68.257	Oryzias_latipes_hni
ENSPLAG00000004646	POP1	100	69.672	ENSORLG00015012746	POP1	100	70.389	Oryzias_latipes_hsok
ENSPLAG00000004646	POP1	100	68.912	ENSOMEG00000006915	pop1	99	69.534	Oryzias_melastigma
ENSPLAG00000004646	POP1	100	46.442	ENSOGAG00000001466	POP1	100	46.957	Otolemur_garnettii
ENSPLAG00000004646	POP1	100	48.266	ENSPPAG00000018410	POP1	100	48.799	Pan_paniscus
ENSPLAG00000004646	POP1	100	47.776	ENSPPRG00000005002	POP1	100	48.019	Panthera_pardus
ENSPLAG00000004646	POP1	100	47.872	ENSPTIG00000016527	POP1	100	47.872	Panthera_tigris_altaica
ENSPLAG00000004646	POP1	100	48.170	ENSPTRG00000020458	POP1	100	48.703	Pan_troglodytes
ENSPLAG00000004646	POP1	100	48.375	ENSPANG00000009704	POP1	100	48.895	Papio_anubis
ENSPLAG00000004646	POP1	100	59.040	ENSPKIG00000016325	POP1	100	58.938	Paramormyrops_kingsleyae
ENSPLAG00000004646	POP1	100	48.359	ENSPSIG00000012343	POP1	100	49.229	Pelodiscus_sinensis
ENSPLAG00000004646	POP1	100	61.461	ENSPMGG00000022253	POP1	100	61.361	Periophthalmus_magnuspinnatus
ENSPLAG00000004646	POP1	99	46.051	ENSPEMG00000023633	Pop1	100	46.051	Peromyscus_maniculatus_bairdii
ENSPLAG00000004646	POP1	91	43.022	ENSPMAG00000003209	POP1	99	43.129	Petromyzon_marinus
ENSPLAG00000004646	POP1	100	45.857	ENSPCIG00000012216	POP1	100	45.857	Phascolarctos_cinereus
ENSPLAG00000004646	POP1	100	98.853	ENSPFOG00000012490	POP1	100	98.853	Poecilia_formosa
ENSPLAG00000004646	POP1	100	97.917	ENSPMEG00000019592	POP1	100	97.917	Poecilia_mexicana
ENSPLAG00000004646	POP1	100	95.218	ENSPREG00000020951	POP1	100	95.218	Poecilia_reticulata
ENSPLAG00000004646	POP1	100	48.223	ENSPPYG00000018777	POP1	100	48.319	Pongo_abelii
ENSPLAG00000004646	POP1	100	45.629	ENSPCAG00000016662	POP1	100	45.533	Procavia_capensis
ENSPLAG00000004646	POP1	100	46.911	ENSPCOG00000019420	POP1	100	47.297	Propithecus_coquereli
ENSPLAG00000004646	POP1	100	47.047	ENSPVAG00000014468	POP1	100	47.868	Pteropus_vampyrus
ENSPLAG00000004646	POP1	100	66.667	ENSPNYG00000004476	pop1	100	66.259	Pundamilia_nyererei
ENSPLAG00000004646	POP1	100	55.142	ENSPNAG00000000265	pop1	100	55.142	Pygocentrus_nattereri
ENSPLAG00000004646	POP1	100	46.095	ENSRNOG00000005243	Pop1	100	46.286	Rattus_norvegicus
ENSPLAG00000004646	POP1	100	48.895	ENSRBIG00000007996	POP1	100	48.799	Rhinopithecus_bieti
ENSPLAG00000004646	POP1	100	48.991	ENSRROG00000012334	POP1	100	48.895	Rhinopithecus_roxellana
ENSPLAG00000004646	POP1	99	47.907	ENSSBOG00000020830	POP1	100	48.101	Saimiri_boliviensis_boliviensis
ENSPLAG00000004646	POP1	100	45.489	ENSSHAG00000000296	POP1	100	45.489	Sarcophilus_harrisii
ENSPLAG00000004646	POP1	100	59.448	ENSSFOG00015007429	pop1	99	59.448	Scleropages_formosus
ENSPLAG00000004646	POP1	100	67.725	ENSSMAG00000010467	POP1	100	68.033	Scophthalmus_maximus
ENSPLAG00000004646	POP1	100	70.896	ENSSDUG00000007817	POP1	100	70.896	Seriola_dumerili
ENSPLAG00000004646	POP1	100	70.997	ENSSLDG00000012565	POP1	100	70.997	Seriola_lalandi_dorsalis
ENSPLAG00000004646	POP1	100	45.817	ENSSPUG00000003550	-	100	46.117	Sphenodon_punctatus
ENSPLAG00000004646	POP1	100	70.234	ENSSPAG00000014955	pop1	100	69.623	Stegastes_partitus
ENSPLAG00000004646	POP1	100	47.549	ENSSSCG00000006078	POP1	100	47.549	Sus_scrofa
ENSPLAG00000004646	POP1	94	44.374	ENSTGUG00000012011	-	100	44.585	Taeniopygia_guttata
ENSPLAG00000004646	POP1	100	66.117	ENSTRUG00000010856	pop1	100	66.117	Takifugu_rubripes
ENSPLAG00000004646	POP1	95	67.469	ENSTNIG00000013297	pop1	100	67.469	Tetraodon_nigroviridis
ENSPLAG00000004646	POP1	93	47.324	ENSTBEG00000014214	POP1	96	47.324	Tupaia_belangeri
ENSPLAG00000004646	POP1	100	45.878	ENSTTRG00000016071	POP1	100	45.975	Tursiops_truncatus
ENSPLAG00000004646	POP1	99	48.307	ENSUAMG00000017309	POP1	100	48.211	Ursus_americanus
ENSPLAG00000004646	POP1	100	46.947	ENSUMAG00000016952	POP1	100	49.237	Ursus_maritimus
ENSPLAG00000004646	POP1	85	51.825	ENSVPAG00000008278	POP1	81	51.825	Vicugna_pacos
ENSPLAG00000004646	POP1	100	47.522	ENSVVUG00000010994	POP1	100	47.522	Vulpes_vulpes
ENSPLAG00000004646	POP1	100	79.959	ENSXCOG00000017043	POP1	100	79.247	Xiphophorus_couchianus
ENSPLAG00000004646	POP1	100	91.354	ENSXMAG00000002472	POP1	100	91.354	Xiphophorus_maculatus