EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000004839 (Gene tree)
Gene ID: 106951095
Gene Symbol: srsf7a
Alias: -
Full Name: serine/arginine-rich splicing factor 7-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 6503 bases
Position: chrKQ545755.1:109192-115694
Accession: 106951095
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000003383	RRM_1	PF00076.22	1.1e-15	1	1
ENSPLAP00000003387	RRM_1	PF00076.22	1.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000011453	-	1582	XM_015038398	ENSPLAP00000003383	243 (aa)	XP_014893884	UPI0004A304B1
ENSPLAT00000011457	-	1034	XM_015038396	ENSPLAP00000003387	257 (aa)	XP_014893882	UPI00072DFF34

Gene Model

Click here to download ENSPLAG00000004839's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000004839's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000004839	srsf7a	62	48.344	ENSAMEG00000000268	SRSF3	69	48.052	Ailuropoda_melanoleuca
ENSPLAG00000004839	srsf7a	61	53.333	ENSACIG00000016419	-	56	74.118	Amphilophus_citrinellus
ENSPLAG00000004839	srsf7a	61	50.000	ENSATEG00000006193	srsf3b	63	71.277	Anabas_testudineus
ENSPLAG00000004839	srsf7a	89	64.545	ENSAMXG00000007005	srsf7b	54	75.221	Astyanax_mexicanus
ENSPLAG00000004839	srsf7a	50	58.400	ENSCAFG00020013547	-	69	59.459	Canis_lupus_dingo
ENSPLAG00000004839	srsf7a	65	50.943	ENSCSAG00000010291	SRSF3	52	74.118	Chlorocebus_sabaeus
ENSPLAG00000004839	srsf7a	64	51.875	ENSCSAVG00000007369	-	68	50.820	Ciona_savignyi
ENSPLAG00000004839	srsf7a	62	54.605	ENSCSEG00000002271	srsf3b	72	68.421	Cynoglossus_semilaevis
ENSPLAG00000004839	srsf7a	56	92.701	ENSCSEG00000006378	srsf7a	79	98.198	Cynoglossus_semilaevis
ENSPLAG00000004839	srsf7a	55	56.296	ENSCVAG00000009865	-	56	74.118	Cyprinodon_variegatus
ENSPLAG00000004839	srsf7a	94	75.424	ENSDARG00000035325	srsf7a	85	93.548	Danio_rerio
ENSPLAG00000004839	srsf7a	63	52.469	ENSEBUG00000002677	-	56	67.442	Eptatretus_burgeri
ENSPLAG00000004839	srsf7a	64	52.410	ENSELUG00000014357	SRSF3	58	69.149	Esox_lucius
ENSPLAG00000004839	srsf7a	78	63.033	ENSELUG00000018155	srsf7b	80	76.577	Esox_lucius
ENSPLAG00000004839	srsf7a	50	100.000	ENSFHEG00000007159	srsf7a	66	100.000	Fundulus_heteroclitus
ENSPLAG00000004839	srsf7a	100	79.675	ENSGMOG00000002004	srsf7a	53	94.309	Gadus_morhua
ENSPLAG00000004839	srsf7a	68	69.643	ENSGALG00000033120	SRSF7	82	79.279	Gallus_gallus
ENSPLAG00000004839	srsf7a	100	99.177	ENSGAFG00000002177	srsf7a	100	99.177	Gambusia_affinis
ENSPLAG00000004839	srsf7a	60	51.351	ENSHCOG00000017795	-	51	70.588	Hippocampus_comes
ENSPLAG00000004839	srsf7a	57	57.857	ENSJJAG00000020230	-	68	63.063	Jaculus_jaculus
ENSPLAG00000004839	srsf7a	62	51.316	ENSLBEG00000013364	srsf3b	73	72.941	Labrus_bergylta
ENSPLAG00000004839	srsf7a	70	74.269	ENSLACG00000018688	srsf7a	54	87.500	Latimeria_chalumnae
ENSPLAG00000004839	srsf7a	71	45.665	ENSMAUG00000011430	-	57	58.140	Mesocricetus_auratus
ENSPLAG00000004839	srsf7a	58	54.167	ENSMAUG00000021932	-	54	63.303	Mesocricetus_auratus
ENSPLAG00000004839	srsf7a	59	48.611	ENSMOCG00000014206	-	87	47.682	Microtus_ochrogaster
ENSPLAG00000004839	srsf7a	51	94.400	ENSMMOG00000005208	srsf7a	74	97.297	Mola_mola
ENSPLAG00000004839	srsf7a	65	52.201	ENSMLUG00000010671	-	52	74.118	Myotis_lucifugus
ENSPLAG00000004839	srsf7a	67	96.914	ENSNBRG00000006601	srsf7a	73	98.198	Neolamprologus_brichardi
ENSPLAG00000004839	srsf7a	65	50.296	ENSORLG00015004309	srsf3b	51	74.118	Oryzias_latipes_hsok
ENSPLAG00000004839	srsf7a	62	49.342	ENSOMEG00000014893	srsf3b	64	69.072	Oryzias_melastigma
ENSPLAG00000004839	srsf7a	54	72.388	ENSPKIG00000017425	srsf7b	63	78.378	Paramormyrops_kingsleyae
ENSPLAG00000004839	srsf7a	50	67.480	ENSPMAG00000004472	srsf7a	54	72.642	Petromyzon_marinus
ENSPLAG00000004839	srsf7a	65	68.553	ENSPCIG00000020694	-	81	78.378	Phascolarctos_cinereus
ENSPLAG00000004839	srsf7a	100	99.222	ENSPFOG00000017803	srsf7a	100	99.222	Poecilia_formosa
ENSPLAG00000004839	srsf7a	100	99.588	ENSPMEG00000002757	srsf7a	100	99.588	Poecilia_mexicana
ENSPLAG00000004839	srsf7a	52	99.206	ENSPREG00000020685	srsf7a	99	99.206	Poecilia_reticulata
ENSPLAG00000004839	srsf7a	65	63.125	ENSRNOG00000008398	AABR07055789.1	67	68.468	Rattus_norvegicus
ENSPLAG00000004839	srsf7a	62	53.289	ENSSMAG00000000387	srsf3b	60	69.072	Scophthalmus_maximus
ENSPLAG00000004839	srsf7a	50	72.581	ENSSDUG00000021338	srsf7b	78	75.676	Seriola_dumerili
ENSPLAG00000004839	srsf7a	53	96.094	ENSSPAG00000022192	srsf7a	93	96.094	Stegastes_partitus
ENSPLAG00000004839	srsf7a	79	55.155	ENSSPAG00000017204	srsf7b	79	76.577	Stegastes_partitus
ENSPLAG00000004839	srsf7a	60	54.362	ENSVVUG00000006092	-	69	65.278	Vulpes_vulpes
ENSPLAG00000004839	srsf7a	52	97.619	ENSXCOG00000009381	srsf7a	99	97.619	Xiphophorus_couchianus
ENSPLAG00000004839	srsf7a	100	98.833	ENSXMAG00000003050	srsf7a	100	98.833	Xiphophorus_maculatus