EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSPLAG00000004984 (Gene tree)
Gene ID
106959299
Gene Symbol
rpa1
Alias
-
Full Name
replication protein A1
Gene Type
protein_coding
Species
Poecilia_latipinna
Status
putative
Strand
Plus strand
Length
30378 bases
Position
chrKQ546380.1:164132-194509
Accession
106959299
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSPLAP00000003506tRNA_anti-codonPF01336.252.5e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSPLAT00000011258-2921XM_015051785ENSPLAP00000003506600 (aa)XP_014907271UPI00072E6E39
Gene Model
Click here to download ENSPLAG00000004984's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000004984's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSPLAG00000004984rpa19458.766ENSPLAG00000008844-9758.766
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSPLAG00000004984rpa19984.667ENSAPOG00000011658rpa19984.667Acanthochromis_polyacanthus
ENSPLAG00000004984rpa19962.624ENSAPOG00000019409RPA19062.624Acanthochromis_polyacanthus
ENSPLAG00000004984rpa19962.397ENSAMEG00000007706RPA19862.397Ailuropoda_melanoleuca
ENSPLAG00000004984rpa19676.389ENSACIG00000007277rpa19976.389Amphilophus_citrinellus
ENSPLAG00000004984rpa19562.351ENSACIG00000012881RPA19962.351Amphilophus_citrinellus
ENSPLAG00000004984rpa19959.105ENSAOCG00000009003RPA19959.259Amphiprion_ocellaris
ENSPLAG00000004984rpa19983.139ENSAOCG00000023376rpa19983.139Amphiprion_ocellaris
ENSPLAG00000004984rpa19983.306ENSAPEG00000008634rpa19983.306Amphiprion_percula
ENSPLAG00000004984rpa19957.919ENSAPEG00000019132RPA19957.919Amphiprion_percula
ENSPLAG00000004984rpa19582.662ENSATEG00000022024rpa110082.662Anabas_testudineus
ENSPLAG00000004984rpa19959.692ENSATEG00000006443RPA19959.692Anabas_testudineus
ENSPLAG00000004984rpa19755.060ENSAPLG00000012442RPA19955.060Anas_platyrhynchos
ENSPLAG00000004984rpa19956.260ENSACAG00000014490RPA19857.781Anolis_carolinensis
ENSPLAG00000004984rpa19664.346ENSANAG00000023456RPA19864.346Aotus_nancymaae
ENSPLAG00000004984rpa19484.192ENSACLG00000006640rpa19984.192Astatotilapia_calliptera
ENSPLAG00000004984rpa19961.792ENSACLG00000005223RPA19961.792Astatotilapia_calliptera
ENSPLAG00000004984rpa19976.910ENSAMXG00000008418rpa19977.205Astyanax_mexicanus
ENSPLAG00000004984rpa19961.463ENSBTAG00000009711RPA19961.463Bos_taurus
ENSPLAG00000004984rpa19961.967ENSCJAG00000001848RPA19962.357Callithrix_jacchus
ENSPLAG00000004984rpa19962.131ENSCAFG00000019249RPA19962.459Canis_familiaris
ENSPLAG00000004984rpa19962.131ENSCAFG00020009847RPA19962.459Canis_lupus_dingo
ENSPLAG00000004984rpa19961.401ENSCHIG00000026308RPA19961.889Capra_hircus
ENSPLAG00000004984rpa19961.866ENSTSYG00000003482-9961.866Carlito_syrichta
ENSPLAG00000004984rpa19963.322ENSCPOG00000000035RPA19963.322Cavia_porcellus
ENSPLAG00000004984rpa19952.295ENSCCAG00000010981RPA19952.700Cebus_capucinus
ENSPLAG00000004984rpa19958.979ENSCLAG00000015045-9858.979Chinchilla_lanigera
ENSPLAG00000004984rpa19962.829ENSCLAG00000005185-9962.829Chinchilla_lanigera
ENSPLAG00000004984rpa19952.700ENSCSAG00000013833RPA19953.191Chlorocebus_sabaeus
ENSPLAG00000004984rpa17270.439ENSCHOG00000009454-9970.439Choloepus_hoffmanni
ENSPLAG00000004984rpa19562.051ENSCHOG00000013540-9962.051Choloepus_hoffmanni
ENSPLAG00000004984rpa19963.934ENSCPBG00000020377RPA19964.789Chrysemys_picta_bellii
ENSPLAG00000004984rpa19943.212ENSCING00000023482-9943.212Ciona_intestinalis
ENSPLAG00000004984rpa19762.585ENSCANG00000030911RPA19962.585Colobus_angolensis_palliatus
ENSPLAG00000004984rpa19961.851ENSCGRG00001008197Rpa19961.851Cricetulus_griseus_chok1gshd
ENSPLAG00000004984rpa18164.229ENSCGRG00000000582Rpa19964.229Cricetulus_griseus_crigri
ENSPLAG00000004984rpa19955.609ENSCSEG00000012726RPA19957.216Cynoglossus_semilaevis
ENSPLAG00000004984rpa110079.077ENSCSEG00000013066rpa110079.077Cynoglossus_semilaevis
ENSPLAG00000004984rpa19555.296ENSCVAG00000013446-9655.452Cyprinodon_variegatus
ENSPLAG00000004984rpa110090.115ENSCVAG00000019431rpa110090.280Cyprinodon_variegatus
ENSPLAG00000004984rpa19974.624ENSDARG00000003938rpa19974.624Danio_rerio
ENSPLAG00000004984rpa19862.914ENSDNOG00000017218RPA19862.914Dasypus_novemcinctus
ENSPLAG00000004984rpa19962.459ENSDORG00000006199Rpa19962.459Dipodomys_ordii
ENSPLAG00000004984rpa19942.390FBgn0010173RpA-709943.208Drosophila_melanogaster
ENSPLAG00000004984rpa18274.468ENSETEG00000017608RPA18174.468Echinops_telfairi
ENSPLAG00000004984rpa19663.993ENSEASG00005009372RPA19863.410Equus_asinus_asinus
ENSPLAG00000004984rpa19962.562ENSECAG00000023886RPA19962.562Equus_caballus
ENSPLAG00000004984rpa17070.406ENSEEUG00000002186-6870.406Erinaceus_europaeus
ENSPLAG00000004984rpa19978.773ENSELUG00000021071rpa19978.773Esox_lucius
ENSPLAG00000004984rpa18861.959ENSELUG00000006136RPA19961.959Esox_lucius
ENSPLAG00000004984rpa19962.153ENSFCAG00000006306RPA19962.153Felis_catus
ENSPLAG00000004984rpa19963.054ENSFALG00000006575RPA19863.054Ficedula_albicollis
ENSPLAG00000004984rpa19963.158ENSFDAG00000007720RPA19963.158Fukomys_damarensis
ENSPLAG00000004984rpa110090.083ENSFHEG00000003580rpa110090.083Fundulus_heteroclitus
ENSPLAG00000004984rpa19976.342ENSGMOG00000010382rpa19976.342Gadus_morhua
ENSPLAG00000004984rpa19961.818ENSGALG00000003072RPA19861.818Gallus_gallus
ENSPLAG00000004984rpa110095.833ENSGAFG00000012916rpa110095.833Gambusia_affinis
ENSPLAG00000004984rpa19958.193ENSGAFG00000020953RPA19958.193Gambusia_affinis
ENSPLAG00000004984rpa110081.260ENSGACG00000010856rpa110081.260Gasterosteus_aculeatus
ENSPLAG00000004984rpa19963.279ENSGAGG00000013611RPA19963.279Gopherus_agassizii
ENSPLAG00000004984rpa19963.167ENSGGOG00000014186RPA19963.167Gorilla_gorilla
ENSPLAG00000004984rpa19557.439ENSHBUG00000009348RPA19857.439Haplochromis_burtoni
ENSPLAG00000004984rpa19986.667ENSHBUG00000017773rpa19986.667Haplochromis_burtoni
ENSPLAG00000004984rpa19962.500ENSHGLG00000008846RPA19962.829Heterocephalus_glaber_female
ENSPLAG00000004984rpa19962.500ENSHGLG00100017755-9962.829Heterocephalus_glaber_male
ENSPLAG00000004984rpa19953.202ENSHGLG00100002005-9953.366Heterocephalus_glaber_male
ENSPLAG00000004984rpa19959.046ENSHGLG00100000799-9859.046Heterocephalus_glaber_male
ENSPLAG00000004984rpa19446.046ENSHCOG00000000351RPA19246.113Hippocampus_comes
ENSPLAG00000004984rpa110074.551ENSHCOG00000001401rpa110074.388Hippocampus_comes
ENSPLAG00000004984rpa19975.124ENSIPUG00000004400rpa19975.124Ictalurus_punctatus
ENSPLAG00000004984rpa19162.148ENSSTOG00000022475RPA19562.148Ictidomys_tridecemlineatus
ENSPLAG00000004984rpa19663.729ENSJJAG00000000876Rpa19863.729Jaculus_jaculus
ENSPLAG00000004984rpa110080.719ENSKMAG00000005605rpa110081.240Kryptolebias_marmoratus
ENSPLAG00000004984rpa19960.231ENSKMAG00000000234RPA19960.231Kryptolebias_marmoratus
ENSPLAG00000004984rpa19981.457ENSLBEG00000021604rpa19981.457Labrus_bergylta
ENSPLAG00000004984rpa19469.266ENSLBEG00000002281RPA18269.266Labrus_bergylta
ENSPLAG00000004984rpa18161.000ENSLACG00000007210RPA19961.000Latimeria_chalumnae
ENSPLAG00000004984rpa19971.452ENSLOCG00000006397rpa19971.452Lepisosteus_oculatus
ENSPLAG00000004984rpa19961.003ENSLAFG00000015354RPA19961.003Loxodonta_africana
ENSPLAG00000004984rpa18060.202ENSMFAG00000036138-9860.808Macaca_fascicularis
ENSPLAG00000004984rpa19663.158ENSMMUG00000011604-9763.667Macaca_mulatta
ENSPLAG00000004984rpa19957.756ENSMMUG00000002442-9957.756Macaca_mulatta
ENSPLAG00000004984rpa19562.799ENSMNEG00000031632-9863.311Macaca_nemestrina
ENSPLAG00000004984rpa18765.188ENSMNEG00000029837-9665.188Macaca_nemestrina
ENSPLAG00000004984rpa19660.068ENSMLEG00000038768-9760.406Mandrillus_leucophaeus
ENSPLAG00000004984rpa19957.036ENSMAMG00000020097RPA19957.036Mastacembelus_armatus
ENSPLAG00000004984rpa110084.359ENSMAMG00000017993rpa110084.359Mastacembelus_armatus
ENSPLAG00000004984rpa19961.792ENSMZEG00005024731RPA19961.792Maylandia_zebra
ENSPLAG00000004984rpa19986.333ENSMZEG00005007551rpa19986.333Maylandia_zebra
ENSPLAG00000004984rpa19860.797ENSMGAG00000005315RPA19860.797Meleagris_gallopavo
ENSPLAG00000004984rpa19663.095ENSMAUG00000010474Rpa19863.435Mesocricetus_auratus
ENSPLAG00000004984rpa19962.745ENSMICG00000012867RPA19962.908Microcebus_murinus
ENSPLAG00000004984rpa19962.664ENSMOCG00000013019Rpa19962.664Microtus_ochrogaster
ENSPLAG00000004984rpa110080.200ENSMMOG00000014292rpa110082.616Mola_mola
ENSPLAG00000004984rpa19861.873ENSMMOG00000010868RPA19861.873Mola_mola
ENSPLAG00000004984rpa19961.928ENSMODG00000010549RPA19961.928Monodelphis_domestica
ENSPLAG00000004984rpa110085.691ENSMALG00000011453rpa110085.691Monopterus_albus
ENSPLAG00000004984rpa19962.525ENSMALG00000001208RPA19562.525Monopterus_albus
ENSPLAG00000004984rpa19961.626MGP_CAROLIEiJ_G0016734Rpa19961.726Mus_caroli
ENSPLAG00000004984rpa19961.031ENSMUSG00000000751Rpa19961.452Mus_musculus
ENSPLAG00000004984rpa19961.974MGP_PahariEiJ_G0017871Rpa19962.399Mus_pahari
ENSPLAG00000004984rpa19960.932MGP_SPRETEiJ_G0017577Rpa19961.353Mus_spretus
ENSPLAG00000004984rpa19962.357ENSMPUG00000013119RPA19962.357Mustela_putorius_furo
ENSPLAG00000004984rpa19662.563ENSMLUG00000006113RPA19562.563Myotis_lucifugus
ENSPLAG00000004984rpa19563.356ENSNGAG00000004522Rpa19363.356Nannospalax_galili
ENSPLAG00000004984rpa19860.235ENSNBRG00000009672RPA19760.235Neolamprologus_brichardi
ENSPLAG00000004984rpa19583.831ENSNBRG00000020595rpa19983.831Neolamprologus_brichardi
ENSPLAG00000004984rpa19963.175ENSNLEG00000017149RPA19963.279Nomascus_leucogenys
ENSPLAG00000004984rpa19654.315ENSMEUG00000006714RPA19754.315Notamacropus_eugenii
ENSPLAG00000004984rpa19562.290ENSODEG00000009038RPA19662.290Octodon_degus
ENSPLAG00000004984rpa19984.967ENSONIG00000013135rpa19984.967Oreochromis_niloticus
ENSPLAG00000004984rpa19862.810ENSOANG00000010880RPA19963.140Ornithorhynchus_anatinus
ENSPLAG00000004984rpa19960.248ENSOCUG00000001504RPA19960.248Oryctolagus_cuniculus
ENSPLAG00000004984rpa19956.836ENSORLG00000003368RPA19956.836Oryzias_latipes
ENSPLAG00000004984rpa19984.114ENSORLG00000004856rpa19984.114Oryzias_latipes
ENSPLAG00000004984rpa19953.695ENSORLG00020015284RPA19953.695Oryzias_latipes_hni
ENSPLAG00000004984rpa19984.448ENSORLG00020008980rpa19984.448Oryzias_latipes_hni
ENSPLAG00000004984rpa19984.448ENSORLG00015013982rpa19984.448Oryzias_latipes_hsok
ENSPLAG00000004984rpa16965.217ENSORLG00015005867-9565.217Oryzias_latipes_hsok
ENSPLAG00000004984rpa19957.121ENSORLG00015020383RPA19957.121Oryzias_latipes_hsok
ENSPLAG00000004984rpa19558.448ENSOMEG00000011040RPA19958.448Oryzias_melastigma
ENSPLAG00000004984rpa19981.302ENSOMEG00000004704rpa19981.302Oryzias_melastigma
ENSPLAG00000004984rpa19962.520ENSOGAG00000005581-9962.520Otolemur_garnettii
ENSPLAG00000004984rpa17575.419ENSOGAG00000029379-9875.419Otolemur_garnettii
ENSPLAG00000004984rpa19961.626ENSOARG00000014479RPA19962.114Ovis_aries
ENSPLAG00000004984rpa19963.666ENSPPAG00000039680RPA19963.770Pan_paniscus
ENSPLAG00000004984rpa19962.295ENSPPRG00000011807RPA19862.295Panthera_pardus
ENSPLAG00000004984rpa19961.990ENSPTIG00000007898RPA19961.990Panthera_tigris_altaica
ENSPLAG00000004984rpa19963.666ENSPTRG00000008539RPA19963.770Pan_troglodytes
ENSPLAG00000004984rpa19962.193ENSPANG00000024592RPA19962.684Papio_anubis
ENSPLAG00000004984rpa19475.789ENSPKIG00000008053rpa19376.316Paramormyrops_kingsleyae
ENSPLAG00000004984rpa19664.177ENSPSIG00000015617RPA19764.177Pelodiscus_sinensis
ENSPLAG00000004984rpa19976.962ENSPMGG00000011589rpa19976.962Periophthalmus_magnuspinnatus
ENSPLAG00000004984rpa19760.000ENSPMGG00000000543RPA19961.676Periophthalmus_magnuspinnatus
ENSPLAG00000004984rpa19963.235ENSPEMG00000021061Rpa19963.235Peromyscus_maniculatus_bairdii
ENSPLAG00000004984rpa19961.601ENSPCIG00000019049RPA19961.664Phascolarctos_cinereus
ENSPLAG00000004984rpa110099.500ENSPFOG00000003987rpa110099.500Poecilia_formosa
ENSPLAG00000004984rpa19458.279ENSPMEG00000003627-9658.279Poecilia_mexicana
ENSPLAG00000004984rpa110099.333ENSPMEG00000020602rpa110099.333Poecilia_mexicana
ENSPLAG00000004984rpa19388.193ENSPREG00000010174rpa19588.193Poecilia_reticulata
ENSPLAG00000004984rpa19956.845ENSPREG00000010119RPA19956.994Poecilia_reticulata
ENSPLAG00000004984rpa19962.582ENSPCOG00000001799RPA19962.582Propithecus_coquereli
ENSPLAG00000004984rpa19961.438ENSPVAG00000002149RPA19961.601Pteropus_vampyrus
ENSPLAG00000004984rpa19961.635ENSPNYG00000024165RPA19961.635Pundamilia_nyererei
ENSPLAG00000004984rpa19986.667ENSPNYG00000016316rpa19986.667Pundamilia_nyererei
ENSPLAG00000004984rpa19967.953ENSPNAG00000008599rpa19669.459Pygocentrus_nattereri
ENSPLAG00000004984rpa19670.244ENSRNOG00000003123Rpa19962.848Rattus_norvegicus
ENSPLAG00000004984rpa19962.684ENSRBIG00000036587RPA19962.684Rhinopithecus_bieti
ENSPLAG00000004984rpa19957.774ENSRROG00000043278RPA19957.774Rhinopithecus_roxellana
ENSPLAG00000004984rpa19432.021YAR007CRFA19332.021Saccharomyces_cerevisiae
ENSPLAG00000004984rpa19064.568ENSSBOG00000030233RPA19664.991Saimiri_boliviensis_boliviensis
ENSPLAG00000004984rpa19662.963ENSSHAG00000007969RPA19563.636Sarcophilus_harrisii
ENSPLAG00000004984rpa19978.203ENSSFOG00015005362rpa19278.203Scleropages_formosus
ENSPLAG00000004984rpa19956.687ENSSMAG00000019746RPA19956.687Scophthalmus_maximus
ENSPLAG00000004984rpa19956.130ENSSDUG00000016358RPA19963.800Seriola_dumerili
ENSPLAG00000004984rpa110085.025ENSSDUG00000011949rpa110085.025Seriola_dumerili
ENSPLAG00000004984rpa19963.400ENSSLDG00000020784RPA19363.400Seriola_lalandi_dorsalis
ENSPLAG00000004984rpa110085.191ENSSLDG00000011806rpa110085.191Seriola_lalandi_dorsalis
ENSPLAG00000004984rpa18678.788ENSSARG00000007506RPA18778.788Sorex_araneus
ENSPLAG00000004984rpa19762.203ENSSPUG00000007223RPA19862.203Sphenodon_punctatus
ENSPLAG00000004984rpa19863.283ENSSPAG00000011165RPA19863.283Stegastes_partitus
ENSPLAG00000004984rpa110084.526ENSSPAG00000009903rpa110084.526Stegastes_partitus
ENSPLAG00000004984rpa19960.927ENSSSCG00000017822RPA19862.500Sus_scrofa
ENSPLAG00000004984rpa19962.645ENSTGUG00000005775RPA19862.645Taeniopygia_guttata
ENSPLAG00000004984rpa19980.268ENSTRUG00000003616rpa19980.268Takifugu_rubripes
ENSPLAG00000004984rpa19968.925ENSTRUG00000000405RPA19962.055Takifugu_rubripes
ENSPLAG00000004984rpa110082.516ENSTNIG00000016199rpa19982.623Tetraodon_nigroviridis
ENSPLAG00000004984rpa17370.227ENSTBEG00000002709RPA17470.227Tupaia_belangeri
ENSPLAG00000004984rpa19961.075ENSTTRG00000001169RPA19961.564Tursiops_truncatus
ENSPLAG00000004984rpa18671.154ENSUAMG00000015676RPA19571.154Ursus_americanus
ENSPLAG00000004984rpa19962.167ENSUMAG00000009328RPA19962.562Ursus_maritimus
ENSPLAG00000004984rpa19959.869ENSVPAG00000009443RPA19959.869Vicugna_pacos
ENSPLAG00000004984rpa19961.967ENSVVUG00000021715RPA19962.295Vulpes_vulpes
ENSPLAG00000004984rpa19966.445ENSXETG00000013538rpa19966.833Xenopus_tropicalis
ENSPLAG00000004984rpa19561.431ENSXCOG00000009899-9961.431Xiphophorus_couchianus
ENSPLAG00000004984rpa19394.265ENSXCOG00000010068rpa19494.265Xiphophorus_couchianus
ENSPLAG00000004984rpa110095.333ENSXMAG00000004102rpa110095.341Xiphophorus_maculatus
ENSPLAG00000004984rpa19368.807ENSXMAG00000010333RPA18068.807Xiphophorus_maculatus

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