EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000005002 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC106940256
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 1985 bases
Position: chrKQ548417.1:32680-34664
Accession: 106940256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000003514	MMR_HSR1	PF01926.23	8.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000011239	-	1545	XM_015022945	ENSPLAP00000003514	514 (aa)	XP_014878431	-

Gene Model

Click here to download ENSPLAG00000005002's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000005002's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000005002	-	88	30.952	ENSPLAG00000002572	-	96	31.263
ENSPLAG00000005002	-	92	30.879	ENSPLAG00000018524	-	88	30.879
ENSPLAG00000005002	-	99	87.819	ENSPLAG00000000406	-	94	87.819
ENSPLAG00000005002	-	96	31.202	ENSPLAG00000006609	-	90	31.202
ENSPLAG00000005002	-	96	31.683	ENSPLAG00000018499	-	91	31.683
ENSPLAG00000005002	-	99	30.058	ENSPLAG00000004493	-	92	30.058
ENSPLAG00000005002	-	97	63.043	ENSPLAG00000010093	-	66	63.043

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000005002	-	95	55.943	ENSAPOG00000015792	-	87	55.943	Acanthochromis_polyacanthus
ENSPLAG00000005002	-	98	55.754	ENSAPOG00000015784	-	83	55.754	Acanthochromis_polyacanthus
ENSPLAG00000005002	-	95	61.460	ENSACIG00000022228	-	84	61.460	Amphilophus_citrinellus
ENSPLAG00000005002	-	97	60.913	ENSACIG00000009923	-	81	61.310	Amphilophus_citrinellus
ENSPLAG00000005002	-	98	59.325	ENSAPEG00000005793	-	94	59.325	Amphiprion_percula
ENSPLAG00000005002	-	99	58.824	ENSATEG00000009097	-	86	58.824	Anabas_testudineus
ENSPLAG00000005002	-	99	61.057	ENSACLG00000023474	-	92	61.057	Astatotilapia_calliptera
ENSPLAG00000005002	-	98	60.861	ENSACLG00000023481	-	92	60.861	Astatotilapia_calliptera
ENSPLAG00000005002	-	98	75.498	ENSCVAG00000018327	-	85	75.498	Cyprinodon_variegatus
ENSPLAG00000005002	-	97	63.690	ENSFHEG00000021969	-	91	63.690	Fundulus_heteroclitus
ENSPLAG00000005002	-	98	76.295	ENSFHEG00000011074	-	78	76.295	Fundulus_heteroclitus
ENSPLAG00000005002	-	98	75.498	ENSFHEG00000008149	-	77	75.498	Fundulus_heteroclitus
ENSPLAG00000005002	-	97	63.889	ENSHBUG00000021307	-	91	63.889	Haplochromis_burtoni
ENSPLAG00000005002	-	99	59.768	ENSHBUG00000012995	-	92	60.155	Haplochromis_burtoni
ENSPLAG00000005002	-	97	63.872	ENSKMAG00000016903	-	67	63.872	Kryptolebias_marmoratus
ENSPLAG00000005002	-	98	63.889	ENSKMAG00000016981	-	80	63.889	Kryptolebias_marmoratus
ENSPLAG00000005002	-	97	41.916	ENSLACG00000008367	-	97	41.551	Latimeria_chalumnae
ENSPLAG00000005002	-	97	58.580	ENSMAMG00000015216	-	91	58.580	Mastacembelus_armatus
ENSPLAG00000005002	-	97	58.185	ENSMAMG00000015097	-	91	58.185	Mastacembelus_armatus
ENSPLAG00000005002	-	99	59.884	ENSMAMG00000015247	-	92	59.884	Mastacembelus_armatus
ENSPLAG00000005002	-	96	62.702	ENSMZEG00005020281	-	83	62.702	Maylandia_zebra
ENSPLAG00000005002	-	99	61.057	ENSMZEG00005020274	-	92	61.057	Maylandia_zebra
ENSPLAG00000005002	-	97	62.227	ENSNBRG00000022932	-	90	62.227	Neolamprologus_brichardi
ENSPLAG00000005002	-	96	61.044	ENSNBRG00000016760	-	98	61.044	Neolamprologus_brichardi
ENSPLAG00000005002	-	96	59.722	ENSNBRG00000016799	-	88	60.119	Neolamprologus_brichardi
ENSPLAG00000005002	-	94	63.017	ENSONIG00000012363	-	99	63.017	Oreochromis_niloticus
ENSPLAG00000005002	-	97	51.779	ENSPKIG00000011996	-	88	51.779	Paramormyrops_kingsleyae
ENSPLAG00000005002	-	97	51.976	ENSPKIG00000009271	-	84	51.976	Paramormyrops_kingsleyae
ENSPLAG00000005002	-	75	54.286	ENSPMGG00000000605	-	75	57.031	Periophthalmus_magnuspinnatus
ENSPLAG00000005002	-	97	62.823	ENSPFOG00000010758	-	79	62.823	Poecilia_formosa
ENSPLAG00000005002	-	99	88.016	ENSPMEG00000014712	-	78	88.016	Poecilia_mexicana
ENSPLAG00000005002	-	97	62.055	ENSPREG00000021204	-	93	61.858	Poecilia_reticulata
ENSPLAG00000005002	-	97	59.046	ENSSMAG00000004663	-	82	59.046	Scophthalmus_maximus
ENSPLAG00000005002	-	97	59.010	ENSSDUG00000004257	-	91	59.010	Seriola_dumerili
ENSPLAG00000005002	-	98	58.020	ENSSLDG00000021625	-	90	58.020	Seriola_lalandi_dorsalis
ENSPLAG00000005002	-	98	62.008	ENSSPAG00000003320	-	86	62.008	Stegastes_partitus
ENSPLAG00000005002	-	99	84.902	ENSXMAG00000022709	-	78	84.902	Xiphophorus_maculatus
ENSPLAG00000005002	-	97	85.972	ENSXMAG00000023457	-	96	85.972	Xiphophorus_maculatus