EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000005034 (Gene tree)
Gene ID: 106952920
Gene Symbol: -
Alias: -
Full Name: RNA exonuclease 1 homolog
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 15622 bases
Position: chrKQ545347.1:52979-68600
Accession: 106952920
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000021332	RNase_T	PF00929.24	8.2e-07	1	1
ENSPLAP00000021342	RNase_T	PF00929.24	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000011229	-	3782	XM_015041361	ENSPLAP00000021342	1076 (aa)	XP_014896847	-
ENSPLAT00000011248	-	2715	-	ENSPLAP00000021332	904 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000005034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000005034's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000005034	-	81	67.767	ENSAPOG00000005095	zgc:152968	91	67.767	Acanthochromis_polyacanthus
ENSPLAG00000005034	-	79	78.293	ENSACIG00000002527	zgc:152968	98	78.293	Amphilophus_citrinellus
ENSPLAG00000005034	-	97	74.645	ENSAOCG00000018049	-	98	72.127	Amphiprion_ocellaris
ENSPLAG00000005034	-	95	76.039	ENSAPEG00000012559	zgc:152968	83	76.039	Amphiprion_percula
ENSPLAG00000005034	-	98	77.910	ENSACLG00000020524	-	80	77.910	Astatotilapia_calliptera
ENSPLAG00000005034	-	81	87.129	ENSCVAG00000015400	zgc:152968	100	87.129	Cyprinodon_variegatus
ENSPLAG00000005034	-	72	62.264	ENSDARG00000037002	zgc:152968	53	63.547	Danio_rerio
ENSPLAG00000005034	-	74	65.566	ENSELUG00000014272	zgc:152968	69	50.531	Esox_lucius
ENSPLAG00000005034	-	97	85.000	ENSFHEG00000003641	-	100	74.600	Fundulus_heteroclitus
ENSPLAG00000005034	-	98	89.952	ENSGAFG00000016810	-	94	96.729	Gambusia_affinis
ENSPLAG00000005034	-	95	77.551	ENSHBUG00000007524	-	78	77.551	Haplochromis_burtoni
ENSPLAG00000005034	-	81	58.203	ENSIPUG00000004633	zgc:152968	83	60.543	Ictalurus_punctatus
ENSPLAG00000005034	-	92	75.366	ENSLBEG00000026485	zgc:152968	90	75.366	Labrus_bergylta
ENSPLAG00000005034	-	100	67.108	ENSMAMG00000005920	-	94	67.108	Mastacembelus_armatus
ENSPLAG00000005034	-	98	77.672	ENSMZEG00005013783	-	80	77.672	Maylandia_zebra
ENSPLAG00000005034	-	91	76.134	ENSMMOG00000018072	zgc:152968	99	78.973	Mola_mola
ENSPLAG00000005034	-	82	75.000	ENSMALG00000003536	-	82	67.500	Monopterus_albus
ENSPLAG00000005034	-	98	76.960	ENSONIG00000016897	-	99	75.330	Oreochromis_niloticus
ENSPLAG00000005034	-	70	76.108	ENSORLG00020012504	-	85	65.127	Oryzias_latipes_hni
ENSPLAG00000005034	-	73	77.941	ENSOMEG00000008840	-	71	76.355	Oryzias_melastigma
ENSPLAG00000005034	-	100	96.190	ENSPFOG00000006104	-	99	97.722	Poecilia_formosa
ENSPLAG00000005034	-	100	92.547	ENSPMEG00000018012	-	100	92.547	Poecilia_mexicana
ENSPLAG00000005034	-	100	90.892	ENSPREG00000007481	-	100	90.892	Poecilia_reticulata
ENSPLAG00000005034	-	62	47.120	ENSSFOG00015023869	zgc:152968	61	61.408	Scleropages_formosus
ENSPLAG00000005034	-	98	74.473	ENSSMAG00000008149	-	81	74.473	Scophthalmus_maximus
ENSPLAG00000005034	-	99	78.177	ENSSDUG00000022323	-	96	79.756	Seriola_dumerili
ENSPLAG00000005034	-	93	80.494	ENSSLDG00000018799	zgc:152968	95	79.707	Seriola_lalandi_dorsalis
ENSPLAG00000005034	-	94	75.644	ENSSPAG00000007632	-	94	73.423	Stegastes_partitus
ENSPLAG00000005034	-	98	73.159	ENSTRUG00000025441	zgc:152968	83	72.365	Takifugu_rubripes
ENSPLAG00000005034	-	99	90.670	ENSXMAG00000026483	-	100	85.159	Xiphophorus_maculatus