EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000005074 (Gene tree)
Gene ID: 106961207
Gene Symbol: rab34b
Alias: -
Full Name: RAB34%2C member RAS oncogene family
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 8618 bases
Position: chrKQ546592.1:84624-93241
Accession: 106961207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000021376	MMR_HSR1	PF01926.23	9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000011134	-	1799	XM_015054770	ENSPLAP00000021376	254 (aa)	XP_014910256	UPI000444844A

Gene Model

Click here to download ENSPLAG00000005074's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000005074's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000005074	rab34b	66	38.323	ENSPLAG00000022515	-	76	38.323
ENSPLAG00000005074	rab34b	80	30.952	ENSPLAG00000014207	-	93	30.952
ENSPLAG00000005074	rab34b	62	35.404	ENSPLAG00000011866	rab9b	72	35.404
ENSPLAG00000005074	rab34b	66	36.905	ENSPLAG00000023128	RAB15	79	36.905
ENSPLAG00000005074	rab34b	63	40.373	ENSPLAG00000019707	rab6bb	76	40.373
ENSPLAG00000005074	rab34b	63	39.375	ENSPLAG00000003181	-	79	39.375
ENSPLAG00000005074	rab34b	85	33.632	ENSPLAG00000005189	rab33a	93	33.632
ENSPLAG00000005074	rab34b	76	35.233	ENSPLAG00000006354	rab15	85	35.233
ENSPLAG00000005074	rab34b	50	44.882	ENSPLAG00000020627	zgc:101559	54	44.882
ENSPLAG00000005074	rab34b	61	33.974	ENSPLAG00000010104	rab18a	75	33.974
ENSPLAG00000005074	rab34b	69	31.638	ENSPLAG00000001065	-	85	31.638
ENSPLAG00000005074	rab34b	83	32.093	ENSPLAG00000021043	si:dkey-16l2.16	99	32.093
ENSPLAG00000005074	rab34b	63	30.625	ENSPLAG00000018718	rab22a	81	30.625
ENSPLAG00000005074	rab34b	70	38.202	ENSPLAG00000005869	zgc:171927	79	38.202
ENSPLAG00000005074	rab34b	64	30.061	ENSPLAG00000017232	rab22a	88	30.061
ENSPLAG00000005074	rab34b	63	33.125	ENSPLAG00000004790	rab5c	71	33.125
ENSPLAG00000005074	rab34b	80	33.649	ENSPLAG00000007773	si:dkey-34d22.5	95	33.649
ENSPLAG00000005074	rab34b	72	37.158	ENSPLAG00000007237	RAB39B	82	37.158
ENSPLAG00000005074	rab34b	63	36.250	ENSPLAG00000013594	rab12	64	36.250
ENSPLAG00000005074	rab34b	70	34.078	ENSPLAG00000014563	rab4a	83	34.078
ENSPLAG00000005074	rab34b	63	37.267	ENSPLAG00000015592	-	78	37.267
ENSPLAG00000005074	rab34b	63	36.646	ENSPLAG00000006520	rab1ab	78	36.646
ENSPLAG00000005074	rab34b	65	35.758	ENSPLAG00000023374	rab2a	76	35.758
ENSPLAG00000005074	rab34b	70	31.461	ENSPLAG00000019136	rab18b	85	31.461
ENSPLAG00000005074	rab34b	80	35.610	ENSPLAG00000020989	rab35b	96	35.122
ENSPLAG00000005074	rab34b	71	33.880	ENSPLAG00000019688	si:dkey-13a21.4	88	33.880
ENSPLAG00000005074	rab34b	71	33.880	ENSPLAG00000005628	rab42a	83	33.880
ENSPLAG00000005074	rab34b	71	37.569	ENSPLAG00000022260	rab6ba	86	37.569
ENSPLAG00000005074	rab34b	72	30.108	ENSPLAG00000002799	RAB7A	89	30.108
ENSPLAG00000005074	rab34b	63	39.375	ENSPLAG00000015383	rab30	77	39.375
ENSPLAG00000005074	rab34b	63	39.375	ENSPLAG00000005832	RAB13	84	39.375
ENSPLAG00000005074	rab34b	59	37.584	ENSPLAG00000011697	rab23	70	40.816
ENSPLAG00000005074	rab34b	64	38.506	ENSPLAG00000021278	rab33ba	71	38.506
ENSPLAG00000005074	rab34b	63	31.875	ENSPLAG00000016333	-	72	31.875
ENSPLAG00000005074	rab34b	63	40.373	ENSPLAG00000000376	rab41	75	40.373
ENSPLAG00000005074	rab34b	63	36.025	ENSPLAG00000018655	rab1ba	79	36.025
ENSPLAG00000005074	rab34b	100	65.098	ENSPLAG00000022991	rab34a	91	65.098
ENSPLAG00000005074	rab34b	80	31.034	ENSPLAG00000017838	rab5aa	89	31.034
ENSPLAG00000005074	rab34b	73	38.172	ENSPLAG00000019570	rab6a	85	38.172
ENSPLAG00000005074	rab34b	65	38.182	ENSPLAG00000018322	-	77	38.182
ENSPLAG00000005074	rab34b	66	38.323	ENSPLAG00000004551	-	76	38.323

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000005074	rab34b	85	90.698	ENSAPOG00000019147	rab34b	95	79.899	Acanthochromis_polyacanthus
ENSPLAG00000005074	rab34b	100	75.591	ENSACIG00000004859	rab34b	99	75.591	Amphilophus_citrinellus
ENSPLAG00000005074	rab34b	100	85.938	ENSAOCG00000007106	rab34b	93	85.938	Amphiprion_ocellaris
ENSPLAG00000005074	rab34b	92	87.179	ENSAPEG00000018607	rab34b	86	86.975	Amphiprion_percula
ENSPLAG00000005074	rab34b	94	81.667	ENSATEG00000006851	rab34b	94	81.667	Anabas_testudineus
ENSPLAG00000005074	rab34b	100	87.795	ENSACLG00000005733	rab34b	96	87.795	Astatotilapia_calliptera
ENSPLAG00000005074	rab34b	99	71.937	ENSAMXG00000006018	rab34b	98	71.937	Astyanax_mexicanus
ENSPLAG00000005074	rab34b	93	81.356	ENSCSEG00000018133	rab34b	94	81.356	Cynoglossus_semilaevis
ENSPLAG00000005074	rab34b	99	73.913	ENSDARG00000010977	rab34b	98	73.913	Danio_rerio
ENSPLAG00000005074	rab34b	100	81.176	ENSELUG00000005597	rab34b	99	81.176	Esox_lucius
ENSPLAG00000005074	rab34b	100	92.520	ENSFHEG00000004532	rab34b	100	92.520	Fundulus_heteroclitus
ENSPLAG00000005074	rab34b	81	81.159	ENSGMOG00000007140	rab34b	100	81.159	Gadus_morhua
ENSPLAG00000005074	rab34b	100	84.314	ENSGACG00000020514	rab34b	99	84.314	Gasterosteus_aculeatus
ENSPLAG00000005074	rab34b	99	70.356	ENSIPUG00000024531	rab34	98	70.356	Ictalurus_punctatus
ENSPLAG00000005074	rab34b	100	89.370	ENSKMAG00000019341	rab34b	100	89.370	Kryptolebias_marmoratus
ENSPLAG00000005074	rab34b	100	85.098	ENSLBEG00000027819	rab34b	100	85.098	Labrus_bergylta
ENSPLAG00000005074	rab34b	100	85.882	ENSMAMG00000020214	rab34b	100	85.882	Mastacembelus_armatus
ENSPLAG00000005074	rab34b	100	81.102	ENSMMOG00000010936	rab34b	86	81.102	Mola_mola
ENSPLAG00000005074	rab34b	93	85.593	ENSMALG00000018499	rab34b	88	85.593	Monopterus_albus
ENSPLAG00000005074	rab34b	100	87.795	ENSONIG00000005519	rab34b	100	87.795	Oreochromis_niloticus
ENSPLAG00000005074	rab34b	100	84.646	ENSORLG00000003119	rab34b	92	84.646	Oryzias_latipes
ENSPLAG00000005074	rab34b	100	85.039	ENSORLG00020016139	rab34b	92	85.039	Oryzias_latipes_hni
ENSPLAG00000005074	rab34b	100	85.433	ENSORLG00015000584	rab34b	92	85.433	Oryzias_latipes_hsok
ENSPLAG00000005074	rab34b	100	85.433	ENSOMEG00000010334	rab34b	98	83.951	Oryzias_melastigma
ENSPLAG00000005074	rab34b	99	71.260	ENSPKIG00000013326	rab34b	98	71.260	Paramormyrops_kingsleyae
ENSPLAG00000005074	rab34b	100	82.283	ENSPMGG00000021697	rab34b	99	82.283	Periophthalmus_magnuspinnatus
ENSPLAG00000005074	rab34b	100	100.000	ENSPFOG00000011444	rab34b	99	100.000	Poecilia_formosa
ENSPLAG00000005074	rab34b	100	100.000	ENSPMEG00000013297	rab34b	100	100.000	Poecilia_mexicana
ENSPLAG00000005074	rab34b	100	99.213	ENSPREG00000009813	rab34b	100	99.213	Poecilia_reticulata
ENSPLAG00000005074	rab34b	100	76.772	ENSPNYG00000017153	rab34b	99	89.831	Pundamilia_nyererei
ENSPLAG00000005074	rab34b	93	73.418	ENSPNAG00000015040	rab34b	99	73.418	Pygocentrus_nattereri
ENSPLAG00000005074	rab34b	100	71.094	ENSSFOG00015005188	rab34	99	71.094	Scleropages_formosus
ENSPLAG00000005074	rab34b	93	84.681	ENSSMAG00000019926	rab34b	100	81.013	Scophthalmus_maximus
ENSPLAG00000005074	rab34b	100	89.020	ENSSDUG00000016760	rab34b	80	89.020	Seriola_dumerili
ENSPLAG00000005074	rab34b	72	93.478	ENSSLDG00000014812	rab34b	90	93.478	Seriola_lalandi_dorsalis
ENSPLAG00000005074	rab34b	100	85.039	ENSSPAG00000002801	rab34b	100	85.039	Stegastes_partitus
ENSPLAG00000005074	rab34b	94	83.750	ENSTRUG00000014481	rab34b	97	83.750	Takifugu_rubripes
ENSPLAG00000005074	rab34b	100	80.784	ENSTNIG00000016158	rab34b	99	80.784	Tetraodon_nigroviridis