EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000005133 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 4380 bases
Position: chrKQ545390.1:216133-220512
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000003601	La	PF05383.17	1.8e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000011068	-	1089	-	ENSPLAP00000003601	362 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000005133's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000005133's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000005133	-	92	31.658	ENSPLAG00000011105	larp6a	57	31.658

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000005133	-	95	54.416	ENSAPOG00000003568	-	93	54.416	Acanthochromis_polyacanthus
ENSPLAG00000005133	-	96	53.203	ENSACIG00000008349	-	83	53.203	Amphilophus_citrinellus
ENSPLAG00000005133	-	95	56.787	ENSAOCG00000004646	larp6b	92	56.787	Amphiprion_ocellaris
ENSPLAG00000005133	-	95	57.064	ENSAPEG00000022748	-	91	57.064	Amphiprion_percula
ENSPLAG00000005133	-	95	56.983	ENSATEG00000021222	-	90	56.983	Anabas_testudineus
ENSPLAG00000005133	-	94	53.521	ENSACLG00000009988	larp6b	89	53.911	Astatotilapia_calliptera
ENSPLAG00000005133	-	54	48.293	ENSAMXG00000018956	larp6b	85	34.314	Astyanax_mexicanus
ENSPLAG00000005133	-	55	30.846	ENSCING00000018361	-	68	30.846	Ciona_intestinalis
ENSPLAG00000005133	-	99	68.975	ENSCVAG00000012145	-	93	68.975	Cyprinodon_variegatus
ENSPLAG00000005133	-	54	48.485	ENSDARG00000003968	larp6b	53	57.746	Danio_rerio
ENSPLAG00000005133	-	91	35.075	ENSELUG00000021677	larp6b	83	35.075	Esox_lucius
ENSPLAG00000005133	-	97	81.250	ENSFHEG00000010409	-	83	81.250	Fundulus_heteroclitus
ENSPLAG00000005133	-	97	96.893	ENSGAFG00000020138	-	89	96.893	Gambusia_affinis
ENSPLAG00000005133	-	94	53.239	ENSHBUG00000012344	larp6b	88	53.631	Haplochromis_burtoni
ENSPLAG00000005133	-	55	45.098	ENSIPUG00000007609	larp6b	85	33.167	Ictalurus_punctatus
ENSPLAG00000005133	-	94	54.416	ENSLBEG00000016460	-	96	54.416	Labrus_bergylta
ENSPLAG00000005133	-	97	56.474	ENSMAMG00000005509	-	90	56.474	Mastacembelus_armatus
ENSPLAG00000005133	-	94	53.239	ENSMZEG00005024390	larp6b	89	53.631	Maylandia_zebra
ENSPLAG00000005133	-	94	53.371	ENSNBRG00000012748	larp6b	90	53.371	Neolamprologus_brichardi
ENSPLAG00000005133	-	52	53.158	ENSPKIG00000025605	larp6b	50	46.429	Paramormyrops_kingsleyae
ENSPLAG00000005133	-	98	99.719	ENSPMEG00000019947	-	99	99.719	Poecilia_mexicana
ENSPLAG00000005133	-	97	97.740	ENSPREG00000011853	-	87	97.740	Poecilia_reticulata
ENSPLAG00000005133	-	96	51.639	ENSPNYG00000007025	larp6b	87	52.033	Pundamilia_nyererei
ENSPLAG00000005133	-	91	34.577	ENSPNAG00000023854	larp6b	84	34.577	Pygocentrus_nattereri
ENSPLAG00000005133	-	69	63.672	ENSSDUG00000009842	-	78	63.672	Seriola_dumerili
ENSPLAG00000005133	-	92	57.349	ENSSLDG00000017081	-	80	57.349	Seriola_lalandi_dorsalis
ENSPLAG00000005133	-	94	55.738	ENSSPAG00000014320	-	88	56.284	Stegastes_partitus
ENSPLAG00000005133	-	97	97.727	ENSXCOG00000018917	-	93	97.727	Xiphophorus_couchianus
ENSPLAG00000005133	-	97	97.727	ENSXMAG00000025734	-	94	97.727	Xiphophorus_maculatus