EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000005218 (Gene tree)
Gene ID: 106961338
Gene Symbol: rbm38
Alias: -
Full Name: RNA-binding protein 38-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 23663 bases
Position: chrKQ545372.1:924125-947787
Accession: 106961338
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000021463	RRM_1	PF00076.22	3.7e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000010930	-	3097	XM_015055021	ENSPLAP00000021463	254 (aa)	XP_014910507	UPI00072E8F71

Gene Model

Click here to download ENSPLAG00000005218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000005218's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000005218	rbm38	98	60.000	ENSPLAG00000002500	-	100	61.176
ENSPLAG00000005218	rbm38	70	61.497	ENSPLAG00000006542	rbm24a	75	63.298
ENSPLAG00000005218	rbm38	59	69.231	ENSPLAG00000019473	rbm24b	81	60.622

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000005218	rbm38	91	58.120	ENSG00000132819	RBM38	91	83.929	Homo_sapiens
ENSPLAG00000005218	rbm38	98	60.392	ENSAPOG00000009939	-	100	60.392	Acanthochromis_polyacanthus
ENSPLAG00000005218	rbm38	100	89.370	ENSAPOG00000003301	rbm38	100	89.370	Acanthochromis_polyacanthus
ENSPLAG00000005218	rbm38	100	85.827	ENSACIG00000000010	rbm38	100	85.827	Amphilophus_citrinellus
ENSPLAG00000005218	rbm38	98	61.024	ENSACIG00000012502	-	100	81.197	Amphilophus_citrinellus
ENSPLAG00000005218	rbm38	100	89.764	ENSAOCG00000013497	-	100	89.764	Amphiprion_ocellaris
ENSPLAG00000005218	rbm38	95	60.494	ENSAOCG00000012559	RBM38	86	65.700	Amphiprion_ocellaris
ENSPLAG00000005218	rbm38	100	89.764	ENSAPEG00000013137	rbm38	100	89.764	Amphiprion_percula
ENSPLAG00000005218	rbm38	98	59.608	ENSAPEG00000023581	-	100	59.608	Amphiprion_percula
ENSPLAG00000005218	rbm38	98	60.784	ENSATEG00000016710	-	100	59.608	Anabas_testudineus
ENSPLAG00000005218	rbm38	100	83.858	ENSATEG00000016366	rbm38	100	83.858	Anabas_testudineus
ENSPLAG00000005218	rbm38	91	57.692	ENSACAG00000016238	RBM38	88	55.365	Anolis_carolinensis
ENSPLAG00000005218	rbm38	91	57.692	ENSANAG00000031959	RBM38	78	90.426	Aotus_nancymaae
ENSPLAG00000005218	rbm38	98	60.700	ENSACLG00000019514	-	100	58.039	Astatotilapia_calliptera
ENSPLAG00000005218	rbm38	98	57.874	ENSAMXG00000015601	-	100	57.480	Astyanax_mexicanus
ENSPLAG00000005218	rbm38	95	54.545	ENSAMXG00000038120	rbm38	79	60.938	Astyanax_mexicanus
ENSPLAG00000005218	rbm38	91	58.974	ENSBTAG00000008105	RBM38	89	56.962	Bos_taurus
ENSPLAG00000005218	rbm38	59	61.184	WBGene00006321	sup-12	78	71.429	Caenorhabditis_elegans
ENSPLAG00000005218	rbm38	91	57.692	ENSCJAG00000019139	RBM38	78	90.426	Callithrix_jacchus
ENSPLAG00000005218	rbm38	91	57.692	ENSCAFG00020021943	RBM38	89	56.410	Canis_lupus_dingo
ENSPLAG00000005218	rbm38	91	58.547	ENSCHIG00000002609	RBM38	89	56.410	Capra_hircus
ENSPLAG00000005218	rbm38	91	58.547	ENSCPOG00000012781	RBM38	89	57.265	Cavia_porcellus
ENSPLAG00000005218	rbm38	91	57.692	ENSCCAG00000036872	RBM38	78	90.426	Cebus_capucinus
ENSPLAG00000005218	rbm38	91	58.547	ENSCATG00000032133	RBM38	78	90.426	Cercocebus_atys
ENSPLAG00000005218	rbm38	91	58.974	ENSCLAG00000005906	RBM38	78	65.761	Chinchilla_lanigera
ENSPLAG00000005218	rbm38	91	58.547	ENSCSAG00000015503	RBM38	89	56.838	Chlorocebus_sabaeus
ENSPLAG00000005218	rbm38	92	56.540	ENSCPBG00000024059	RBM38	84	62.766	Chrysemys_picta_bellii
ENSPLAG00000005218	rbm38	59	61.006	ENSCING00000025102	-	53	70.732	Ciona_intestinalis
ENSPLAG00000005218	rbm38	91	44.681	ENSCANG00000030105	-	78	43.830	Colobus_angolensis_palliatus
ENSPLAG00000005218	rbm38	72	64.674	ENSCGRG00001012928	Rbm38	89	55.128	Cricetulus_griseus_chok1gshd
ENSPLAG00000005218	rbm38	84	65.258	ENSCSEG00000020943	rbm38	63	68.041	Cynoglossus_semilaevis
ENSPLAG00000005218	rbm38	98	61.417	ENSCSEG00000004701	-	100	60.784	Cynoglossus_semilaevis
ENSPLAG00000005218	rbm38	100	92.126	ENSCVAG00000015952	rbm38	100	92.126	Cyprinodon_variegatus
ENSPLAG00000005218	rbm38	98	61.569	ENSCVAG00000005472	-	100	59.608	Cyprinodon_variegatus
ENSPLAG00000005218	rbm38	98	61.265	ENSDARG00000058818	rbm38	83	67.805	Danio_rerio
ENSPLAG00000005218	rbm38	91	56.466	ENSDNOG00000032004	RBM38	98	54.741	Dasypus_novemcinctus
ENSPLAG00000005218	rbm38	91	57.692	ENSECAG00000007700	RBM38	89	56.410	Equus_caballus
ENSPLAG00000005218	rbm38	91	56.596	ENSEEUG00000013489	RBM38	89	54.894	Erinaceus_europaeus
ENSPLAG00000005218	rbm38	92	67.949	ENSELUG00000000585	-	100	65.812	Esox_lucius
ENSPLAG00000005218	rbm38	98	58.687	ENSELUG00000005849	-	100	57.915	Esox_lucius
ENSPLAG00000005218	rbm38	91	58.120	ENSFCAG00000042916	RBM38	78	89.362	Felis_catus
ENSPLAG00000005218	rbm38	69	68.750	ENSFALG00000010805	RBM38	88	66.286	Ficedula_albicollis
ENSPLAG00000005218	rbm38	100	92.941	ENSFHEG00000017748	rbm38	100	92.941	Fundulus_heteroclitus
ENSPLAG00000005218	rbm38	98	59.608	ENSFHEG00000006160	-	100	59.608	Fundulus_heteroclitus
ENSPLAG00000005218	rbm38	76	65.625	ENSGMOG00000016655	-	100	66.839	Gadus_morhua
ENSPLAG00000005218	rbm38	92	55.932	ENSGALG00000026081	RBM38	84	60.963	Gallus_gallus
ENSPLAG00000005218	rbm38	93	73.840	ENSGACG00000015224	rbm38	100	73.840	Gasterosteus_aculeatus
ENSPLAG00000005218	rbm38	93	57.500	ENSGACG00000009873	-	100	57.261	Gasterosteus_aculeatus
ENSPLAG00000005218	rbm38	92	56.962	ENSGAGG00000001187	RBM38	84	63.298	Gopherus_agassizii
ENSPLAG00000005218	rbm38	98	60.700	ENSHBUG00000011778	-	100	58.039	Haplochromis_burtoni
ENSPLAG00000005218	rbm38	100	85.433	ENSHBUG00000012058	rbm38	100	85.433	Haplochromis_burtoni
ENSPLAG00000005218	rbm38	91	59.402	ENSHGLG00000015077	RBM38	89	56.838	Heterocephalus_glaber_female
ENSPLAG00000005218	rbm38	81	63.942	ENSHCOG00000005622	-	57	65.700	Hippocampus_comes
ENSPLAG00000005218	rbm38	100	60.784	ENSHCOG00000019040	rbm38	100	60.784	Hippocampus_comes
ENSPLAG00000005218	rbm38	98	57.087	ENSIPUG00000019349	-	100	56.299	Ictalurus_punctatus
ENSPLAG00000005218	rbm38	91	72.803	ENSKMAG00000012402	rbm38	99	72.803	Kryptolebias_marmoratus
ENSPLAG00000005218	rbm38	100	84.252	ENSLBEG00000018878	rbm38	100	84.252	Labrus_bergylta
ENSPLAG00000005218	rbm38	98	57.692	ENSLBEG00000016163	RBM38	100	58.824	Labrus_bergylta
ENSPLAG00000005218	rbm38	98	60.317	ENSLOCG00000003456	rbm38	100	56.349	Lepisosteus_oculatus
ENSPLAG00000005218	rbm38	91	58.547	ENSMFAG00000043808	RBM38	78	90.426	Macaca_fascicularis
ENSPLAG00000005218	rbm38	91	58.547	ENSMMUG00000031391	RBM38	78	90.426	Macaca_mulatta
ENSPLAG00000005218	rbm38	91	58.547	ENSMNEG00000034683	RBM38	78	90.426	Macaca_nemestrina
ENSPLAG00000005218	rbm38	98	62.205	ENSMAMG00000020499	RBM38	100	61.024	Mastacembelus_armatus
ENSPLAG00000005218	rbm38	100	87.008	ENSMAMG00000024135	rbm38	100	87.008	Mastacembelus_armatus
ENSPLAG00000005218	rbm38	98	60.700	ENSMZEG00005000849	-	100	58.039	Maylandia_zebra
ENSPLAG00000005218	rbm38	100	85.433	ENSMZEG00005026036	rbm38	100	85.433	Maylandia_zebra
ENSPLAG00000005218	rbm38	72	65.217	ENSMAUG00000021211	Rbm38	89	55.983	Mesocricetus_auratus
ENSPLAG00000005218	rbm38	91	57.265	ENSMICG00000038011	RBM38	98	55.983	Microcebus_murinus
ENSPLAG00000005218	rbm38	72	65.217	ENSMOCG00000008715	Rbm38	89	55.983	Microtus_ochrogaster
ENSPLAG00000005218	rbm38	98	59.608	ENSMMOG00000020051	-	100	59.216	Mola_mola
ENSPLAG00000005218	rbm38	92	55.508	ENSMODG00000016458	RBM38	91	53.814	Monodelphis_domestica
ENSPLAG00000005218	rbm38	100	70.079	ENSMALG00000022327	rbm38	100	67.829	Monopterus_albus
ENSPLAG00000005218	rbm38	76	69.072	ENSMALG00000004680	RBM38	71	69.072	Monopterus_albus
ENSPLAG00000005218	rbm38	91	58.120	MGP_CAROLIEiJ_G0024745	Rbm38	89	56.540	Mus_caroli
ENSPLAG00000005218	rbm38	91	58.120	ENSMUSG00000027510	Rbm38	89	56.118	Mus_musculus
ENSPLAG00000005218	rbm38	91	57.265	MGP_PahariEiJ_G0026186	Rbm38	89	55.983	Mus_pahari
ENSPLAG00000005218	rbm38	91	58.120	MGP_SPRETEiJ_G0025665	Rbm38	89	56.118	Mus_spretus
ENSPLAG00000005218	rbm38	72	65.217	ENSMPUG00000006518	RBM38	89	63.587	Mustela_putorius_furo
ENSPLAG00000005218	rbm38	91	57.692	ENSMLUG00000011140	RBM38	98	55.128	Myotis_lucifugus
ENSPLAG00000005218	rbm38	100	85.827	ENSNBRG00000022685	rbm38	100	85.827	Neolamprologus_brichardi
ENSPLAG00000005218	rbm38	98	60.700	ENSNBRG00000022545	-	100	58.755	Neolamprologus_brichardi
ENSPLAG00000005218	rbm38	91	59.829	ENSODEG00000007980	RBM38	89	58.403	Octodon_degus
ENSPLAG00000005218	rbm38	98	85.542	ENSONIG00000017073	rbm38	100	85.542	Oreochromis_niloticus
ENSPLAG00000005218	rbm38	98	60.547	ENSONIG00000020324	-	100	58.594	Oreochromis_niloticus
ENSPLAG00000005218	rbm38	91	55.556	ENSOANG00000009259	RBM38	69	62.162	Ornithorhynchus_anatinus
ENSPLAG00000005218	rbm38	98	57.198	ENSORLG00000027180	-	100	57.255	Oryzias_latipes
ENSPLAG00000005218	rbm38	100	82.353	ENSORLG00000012154	rbm38	100	79.216	Oryzias_latipes
ENSPLAG00000005218	rbm38	100	83.137	ENSORLG00020017871	rbm38	100	79.216	Oryzias_latipes_hni
ENSPLAG00000005218	rbm38	100	56.705	ENSORLG00020020751	-	100	57.255	Oryzias_latipes_hni
ENSPLAG00000005218	rbm38	100	83.137	ENSORLG00015012606	rbm38	100	79.216	Oryzias_latipes_hsok
ENSPLAG00000005218	rbm38	98	58.661	ENSORLG00015017040	-	100	59.533	Oryzias_latipes_hsok
ENSPLAG00000005218	rbm38	98	58.039	ENSOMEG00000023912	-	100	58.366	Oryzias_melastigma
ENSPLAG00000005218	rbm38	100	83.137	ENSOMEG00000006805	rbm38	100	79.216	Oryzias_melastigma
ENSPLAG00000005218	rbm38	91	58.547	ENSOGAG00000029136	RBM38	88	56.540	Otolemur_garnettii
ENSPLAG00000005218	rbm38	91	58.120	ENSPPRG00000009507	RBM38	78	89.362	Panthera_pardus
ENSPLAG00000005218	rbm38	77	63.265	ENSPTRG00000013661	RBM38	78	90.426	Pan_troglodytes
ENSPLAG00000005218	rbm38	91	58.547	ENSPANG00000020919	-	78	90.426	Papio_anubis
ENSPLAG00000005218	rbm38	95	46.939	ENSPANG00000033127	-	89	46.809	Papio_anubis
ENSPLAG00000005218	rbm38	98	57.540	ENSPKIG00000018122	-	95	81.982	Paramormyrops_kingsleyae
ENSPLAG00000005218	rbm38	98	55.642	ENSPKIG00000025417	rbm38	83	62.679	Paramormyrops_kingsleyae
ENSPLAG00000005218	rbm38	92	55.696	ENSPSIG00000011649	RBM38	77	61.497	Pelodiscus_sinensis
ENSPLAG00000005218	rbm38	100	72.549	ENSPMGG00000011343	rbm38	100	75.294	Periophthalmus_magnuspinnatus
ENSPLAG00000005218	rbm38	98	57.588	ENSPMGG00000017094	-	100	56.641	Periophthalmus_magnuspinnatus
ENSPLAG00000005218	rbm38	92	55.932	ENSPCIG00000013648	RBM38	91	54.661	Phascolarctos_cinereus
ENSPLAG00000005218	rbm38	100	99.606	ENSPFOG00000011658	rbm38	100	99.606	Poecilia_formosa
ENSPLAG00000005218	rbm38	100	99.213	ENSPMEG00000015770	rbm38	100	99.213	Poecilia_mexicana
ENSPLAG00000005218	rbm38	100	99.213	ENSPREG00000007398	rbm38	100	99.213	Poecilia_reticulata
ENSPLAG00000005218	rbm38	91	57.692	ENSPCOG00000026201	RBM38	77	90.426	Propithecus_coquereli
ENSPLAG00000005218	rbm38	72	40.217	ENSPVAG00000006457	RBM38	89	35.470	Pteropus_vampyrus
ENSPLAG00000005218	rbm38	98	60.700	ENSPNYG00000019727	-	100	81.197	Pundamilia_nyererei
ENSPLAG00000005218	rbm38	100	85.039	ENSPNYG00000021373	rbm38	100	85.039	Pundamilia_nyererei
ENSPLAG00000005218	rbm38	98	59.055	ENSPNAG00000015123	-	88	82.456	Pygocentrus_nattereri
ENSPLAG00000005218	rbm38	94	59.184	ENSPNAG00000010596	rbm38	98	58.506	Pygocentrus_nattereri
ENSPLAG00000005218	rbm38	91	58.974	ENSRNOG00000006420	Rbm38	89	56.540	Rattus_norvegicus
ENSPLAG00000005218	rbm38	92	50.847	ENSRROG00000036388	-	88	49.576	Rhinopithecus_roxellana
ENSPLAG00000005218	rbm38	91	56.838	ENSSBOG00000031053	RBM38	88	90.426	Saimiri_boliviensis_boliviensis
ENSPLAG00000005218	rbm38	98	57.143	ENSSFOG00015004453	rbm38	100	54.688	Scleropages_formosus
ENSPLAG00000005218	rbm38	100	87.008	ENSSDUG00000022611	rbm38	100	87.008	Seriola_dumerili
ENSPLAG00000005218	rbm38	98	60.938	ENSSDUG00000021082	RBM38	100	60.000	Seriola_dumerili
ENSPLAG00000005218	rbm38	98	60.938	ENSSLDG00000011778	RBM38	100	60.000	Seriola_lalandi_dorsalis
ENSPLAG00000005218	rbm38	100	87.008	ENSSLDG00000010845	rbm38	100	87.008	Seriola_lalandi_dorsalis
ENSPLAG00000005218	rbm38	100	89.370	ENSSPAG00000011113	rbm38	100	89.370	Stegastes_partitus
ENSPLAG00000005218	rbm38	98	60.784	ENSSPAG00000020989	RBM38	100	60.392	Stegastes_partitus
ENSPLAG00000005218	rbm38	91	57.692	ENSSSCG00000007504	RBM38	89	56.410	Sus_scrofa
ENSPLAG00000005218	rbm38	100	79.134	ENSTRUG00000024954	rbm38	100	75.591	Takifugu_rubripes
ENSPLAG00000005218	rbm38	98	59.449	ENSTRUG00000019869	-	100	60.000	Takifugu_rubripes
ENSPLAG00000005218	rbm38	94	60.166	ENSTNIG00000007093	-	100	58.678	Tetraodon_nigroviridis
ENSPLAG00000005218	rbm38	74	64.021	ENSUAMG00000019780	RBM38	89	55.983	Ursus_americanus
ENSPLAG00000005218	rbm38	91	57.692	ENSVVUG00000017246	RBM38	89	56.410	Vulpes_vulpes
ENSPLAG00000005218	rbm38	76	62.887	ENSXETG00000011268	rbm38	98	55.649	Xenopus_tropicalis
ENSPLAG00000005218	rbm38	83	53.540	ENSXCOG00000017324	-	62	75.000	Xiphophorus_couchianus
ENSPLAG00000005218	rbm38	100	97.244	ENSXMAG00000023662	rbm38	100	97.244	Xiphophorus_maculatus