EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000005268 (Gene tree)
Gene ID: 106934527
Gene Symbol: casc3
Alias: -
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 14441 bases
Position: chrKQ547131.1:127043-141483
Accession: 106934527
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000003732	Btz	PF09405.10	1.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000010854	-	2327	XM_015014493	ENSPLAP00000003732	767 (aa)	XP_014869979	UPI00072D9A6E

Gene Model

Click here to download ENSPLAG00000005268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000005268's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000005268	casc3	61	62.903	ENSG00000108349	CASC3	75	64.706	Homo_sapiens
ENSPLAG00000005268	casc3	100	71.283	ENSAPOG00000008467	casc3	100	71.086	Acanthochromis_polyacanthus
ENSPLAG00000005268	casc3	77	54.397	ENSAMEG00000007764	CASC3	95	48.849	Ailuropoda_melanoleuca
ENSPLAG00000005268	casc3	71	88.406	ENSACIG00000000720	casc3	89	88.406	Amphilophus_citrinellus
ENSPLAG00000005268	casc3	100	72.173	ENSAOCG00000016676	casc3	100	70.865	Amphiprion_ocellaris
ENSPLAG00000005268	casc3	100	72.414	ENSAPEG00000006787	casc3	100	71.867	Amphiprion_percula
ENSPLAG00000005268	casc3	100	75.924	ENSATEG00000017196	casc3	100	73.171	Anabas_testudineus
ENSPLAG00000005268	casc3	94	41.699	ENSACAG00000002674	CASC3	72	51.440	Anolis_carolinensis
ENSPLAG00000005268	casc3	76	52.104	ENSANAG00000034820	-	87	50.000	Aotus_nancymaae
ENSPLAG00000005268	casc3	100	75.000	ENSACLG00000016198	casc3	100	75.964	Astatotilapia_calliptera
ENSPLAG00000005268	casc3	72	51.840	ENSCJAG00000016032	CASC3	78	52.652	Callithrix_jacchus
ENSPLAG00000005268	casc3	61	63.441	ENSCAFG00000016141	CASC3	55	48.082	Canis_familiaris
ENSPLAG00000005268	casc3	77	53.746	ENSCAFG00020018882	CASC3	88	52.549	Canis_lupus_dingo
ENSPLAG00000005268	casc3	77	54.693	ENSCHIG00000006338	CASC3	75	54.633	Capra_hircus
ENSPLAG00000005268	casc3	69	54.369	ENSTSYG00000002975	CASC3	80	52.653	Carlito_syrichta
ENSPLAG00000005268	casc3	58	67.702	ENSCAPG00000010514	CASC3	83	66.871	Cavia_aperea
ENSPLAG00000005268	casc3	77	54.545	ENSCPOG00000015139	CASC3	90	50.562	Cavia_porcellus
ENSPLAG00000005268	casc3	83	47.130	ENSCCAG00000033620	CASC3	76	53.937	Cebus_capucinus
ENSPLAG00000005268	casc3	71	54.045	ENSCATG00000033593	CASC3	76	53.918	Cercocebus_atys
ENSPLAG00000005268	casc3	77	54.723	ENSCLAG00000013730	CASC3	81	53.200	Chinchilla_lanigera
ENSPLAG00000005268	casc3	77	54.045	ENSCSAG00000002777	CASC3	76	53.918	Chlorocebus_sabaeus
ENSPLAG00000005268	casc3	76	52.215	ENSCPBG00000004750	CASC3	77	56.090	Chrysemys_picta_bellii
ENSPLAG00000005268	casc3	71	54.369	ENSCANG00000008814	CASC3	76	53.543	Colobus_angolensis_palliatus
ENSPLAG00000005268	casc3	87	48.485	ENSCGRG00001014706	Casc3	96	48.082	Cricetulus_griseus_chok1gshd
ENSPLAG00000005268	casc3	87	48.346	ENSCGRG00000001952	Casc3	94	48.082	Cricetulus_griseus_crigri
ENSPLAG00000005268	casc3	100	67.123	ENSCSEG00000010047	casc3	80	69.735	Cynoglossus_semilaevis
ENSPLAG00000005268	casc3	100	80.260	ENSCVAG00000014935	casc3	100	81.429	Cyprinodon_variegatus
ENSPLAG00000005268	casc3	61	64.674	ENSETEG00000013720	CASC3	76	54.000	Echinops_telfairi
ENSPLAG00000005268	casc3	68	39.091	ENSEBUG00000010654	casc3	68	37.993	Eptatretus_burgeri
ENSPLAG00000005268	casc3	71	54.693	ENSEASG00005002909	CASC3	86	52.549	Equus_asinus_asinus
ENSPLAG00000005268	casc3	61	63.978	ENSECAG00000019947	CASC3	76	53.937	Equus_caballus
ENSPLAG00000005268	casc3	60	62.903	ENSFCAG00000014998	CASC3	50	50.704	Felis_catus
ENSPLAG00000005268	casc3	73	50.357	ENSFALG00000000412	CASC3	82	52.361	Ficedula_albicollis
ENSPLAG00000005268	casc3	77	53.696	ENSFDAG00000020696	CASC3	87	51.779	Fukomys_damarensis
ENSPLAG00000005268	casc3	100	81.948	ENSFHEG00000015793	casc3	100	81.510	Fundulus_heteroclitus
ENSPLAG00000005268	casc3	93	43.658	ENSGALG00000031813	CASC3	82	53.185	Gallus_gallus
ENSPLAG00000005268	casc3	98	92.641	ENSGAFG00000017148	casc3	86	90.707	Gambusia_affinis
ENSPLAG00000005268	casc3	58	67.763	ENSGAGG00000008432	CASC3	77	68.000	Gopherus_agassizii
ENSPLAG00000005268	casc3	77	53.398	ENSGGOG00000005067	CASC3	76	53.605	Gorilla_gorilla
ENSPLAG00000005268	casc3	100	75.385	ENSHBUG00000013155	casc3	100	76.350	Haplochromis_burtoni
ENSPLAG00000005268	casc3	71	55.426	ENSHGLG00000012117	CASC3	77	53.459	Heterocephalus_glaber_female
ENSPLAG00000005268	casc3	100	62.982	ENSHCOG00000002664	casc3	94	60.929	Hippocampus_comes
ENSPLAG00000005268	casc3	87	48.378	ENSSTOG00000006374	CASC3	94	48.276	Ictidomys_tridecemlineatus
ENSPLAG00000005268	casc3	79	51.703	ENSJJAG00000023525	Casc3	85	52.698	Jaculus_jaculus
ENSPLAG00000005268	casc3	93	78.108	ENSKMAG00000019507	casc3	99	76.923	Kryptolebias_marmoratus
ENSPLAG00000005268	casc3	96	70.026	ENSLBEG00000005435	casc3	79	73.994	Labrus_bergylta
ENSPLAG00000005268	casc3	79	51.090	ENSLACG00000013200	CASC3	73	52.188	Latimeria_chalumnae
ENSPLAG00000005268	casc3	69	67.949	ENSLOCG00000013518	casc3	64	67.949	Lepisosteus_oculatus
ENSPLAG00000005268	casc3	77	52.427	ENSLAFG00000000606	CASC3	75	53.150	Loxodonta_africana
ENSPLAG00000005268	casc3	71	54.045	ENSMFAG00000041496	CASC3	83	53.918	Macaca_fascicularis
ENSPLAG00000005268	casc3	61	63.441	ENSMMUG00000045187	CASC3	76	53.918	Macaca_mulatta
ENSPLAG00000005268	casc3	69	54.045	ENSMLEG00000029049	CASC3	83	53.918	Mandrillus_leucophaeus
ENSPLAG00000005268	casc3	96	71.979	ENSMAMG00000005235	casc3	96	71.771	Mastacembelus_armatus
ENSPLAG00000005268	casc3	100	75.000	ENSMZEG00005003815	casc3	100	75.964	Maylandia_zebra
ENSPLAG00000005268	casc3	72	48.397	ENSMGAG00000013247	CASC3	82	52.548	Meleagris_gallopavo
ENSPLAG00000005268	casc3	50	59.375	ENSMAUG00000006023	Casc3	75	61.364	Mesocricetus_auratus
ENSPLAG00000005268	casc3	61	61.828	ENSMICG00000003321	CASC3	54	46.803	Microcebus_murinus
ENSPLAG00000005268	casc3	80	53.704	ENSMOCG00000013644	Casc3	85	53.846	Microtus_ochrogaster
ENSPLAG00000005268	casc3	100	70.603	ENSMMOG00000014339	casc3	100	71.080	Mola_mola
ENSPLAG00000005268	casc3	54	73.282	ENSMODG00000013044	CASC3	64	55.769	Monodelphis_domestica
ENSPLAG00000005268	casc3	65	94.949	ENSMALG00000019771	casc3	82	92.793	Monopterus_albus
ENSPLAG00000005268	casc3	87	49.235	MGP_CAROLIEiJ_G0017099	Casc3	86	53.755	Mus_caroli
ENSPLAG00000005268	casc3	87	49.235	ENSMUSG00000078676	Casc3	86	53.755	Mus_musculus
ENSPLAG00000005268	casc3	80	53.876	MGP_SPRETEiJ_G0017943	Casc3	86	53.755	Mus_spretus
ENSPLAG00000005268	casc3	62	63.441	ENSMPUG00000014903	CASC3	86	53.543	Mustela_putorius_furo
ENSPLAG00000005268	casc3	77	51.125	ENSMLUG00000010520	CASC3	83	52.396	Myotis_lucifugus
ENSPLAG00000005268	casc3	61	63.441	ENSNGAG00000023121	Casc3	81	54.839	Nannospalax_galili
ENSPLAG00000005268	casc3	77	53.922	ENSNLEG00000001598	CASC3	76	54.403	Nomascus_leucogenys
ENSPLAG00000005268	casc3	58	63.636	ENSMEUG00000015662	CASC3	64	59.639	Notamacropus_eugenii
ENSPLAG00000005268	casc3	71	55.814	ENSODEG00000017858	CASC3	81	54.400	Octodon_degus
ENSPLAG00000005268	casc3	100	74.617	ENSONIG00000009337	casc3	100	74.136	Oreochromis_niloticus
ENSPLAG00000005268	casc3	63	63.441	ENSOCUG00000002954	CASC3	86	53.150	Oryctolagus_cuniculus
ENSPLAG00000005268	casc3	100	68.442	ENSORLG00000023125	casc3	100	68.182	Oryzias_latipes
ENSPLAG00000005268	casc3	61	62.903	ENSOGAG00000034486	CASC3	76	53.150	Otolemur_garnettii
ENSPLAG00000005268	casc3	77	53.822	ENSOARG00000013239	CASC3	75	54.633	Ovis_aries
ENSPLAG00000005268	casc3	77	53.398	ENSPPAG00000035069	CASC3	76	53.605	Pan_paniscus
ENSPLAG00000005268	casc3	60	62.903	ENSPPRG00000023670	CASC3	86	53.150	Panthera_pardus
ENSPLAG00000005268	casc3	60	62.366	ENSPTIG00000010891	CASC3	86	52.756	Panthera_tigris_altaica
ENSPLAG00000005268	casc3	71	53.548	ENSPANG00000021708	CASC3	76	53.918	Papio_anubis
ENSPLAG00000005268	casc3	99	52.956	ENSPKIG00000023186	casc3	94	51.579	Paramormyrops_kingsleyae
ENSPLAG00000005268	casc3	71	52.922	ENSPCIG00000025678	CASC3	75	54.019	Phascolarctos_cinereus
ENSPLAG00000005268	casc3	99	89.791	ENSPFOG00000017632	casc3	96	99.640	Poecilia_formosa
ENSPLAG00000005268	casc3	79	97.355	ENSPREG00000011856	casc3	91	97.355	Poecilia_reticulata
ENSPLAG00000005268	casc3	70	54.072	ENSPPYG00000008467	CASC3	86	52.362	Pongo_abelii
ENSPLAG00000005268	casc3	61	61.828	ENSPCOG00000008183	CASC3	86	53.175	Propithecus_coquereli
ENSPLAG00000005268	casc3	100	75.385	ENSPNYG00000011962	casc3	100	76.350	Pundamilia_nyererei
ENSPLAG00000005268	casc3	80	52.853	ENSRNOG00000009716	Casc3	84	53.571	Rattus_norvegicus
ENSPLAG00000005268	casc3	71	54.045	ENSRBIG00000033289	CASC3	69	65.294	Rhinopithecus_bieti
ENSPLAG00000005268	casc3	71	54.045	ENSRROG00000022337	CASC3	69	65.294	Rhinopithecus_roxellana
ENSPLAG00000005268	casc3	61	63.441	ENSSBOG00000031406	CASC3	78	63.333	Saimiri_boliviensis_boliviensis
ENSPLAG00000005268	casc3	69	53.896	ENSSHAG00000013338	CASC3	74	65.217	Sarcophilus_harrisii
ENSPLAG00000005268	casc3	100	69.441	ENSSMAG00000016096	casc3	100	69.938	Scophthalmus_maximus
ENSPLAG00000005268	casc3	100	74.520	ENSSDUG00000016893	casc3	95	74.520	Seriola_dumerili
ENSPLAG00000005268	casc3	88	75.362	ENSSLDG00000020308	casc3	100	78.431	Seriola_lalandi_dorsalis
ENSPLAG00000005268	casc3	55	60.870	ENSSARG00000010378	CASC3	71	66.250	Sorex_araneus
ENSPLAG00000005268	casc3	100	75.190	ENSSPAG00000023008	casc3	100	71.303	Stegastes_partitus
ENSPLAG00000005268	casc3	69	55.336	ENSSSCG00000017477	CASC3	74	65.882	Sus_scrofa
ENSPLAG00000005268	casc3	75	44.352	ENSTGUG00000002300	CASC3	81	65.766	Taeniopygia_guttata
ENSPLAG00000005268	casc3	96	66.846	ENSTRUG00000000673	casc3	95	64.706	Takifugu_rubripes
ENSPLAG00000005268	casc3	100	63.355	ENSTNIG00000003208	casc3	91	71.552	Tetraodon_nigroviridis
ENSPLAG00000005268	casc3	58	63.462	ENSTBEG00000017459	CASC3	50	69.930	Tupaia_belangeri
ENSPLAG00000005268	casc3	77	54.693	ENSUAMG00000015116	CASC3	89	52.157	Ursus_americanus
ENSPLAG00000005268	casc3	69	54.693	ENSUMAG00000017697	CASC3	97	63.529	Ursus_maritimus
ENSPLAG00000005268	casc3	61	63.441	ENSVVUG00000000997	CASC3	55	48.082	Vulpes_vulpes
ENSPLAG00000005268	casc3	100	91.355	ENSXMAG00000013937	casc3	100	91.484	Xiphophorus_maculatus