EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000005321 (Gene tree)
Gene ID: -
Gene Symbol: frg1
Alias: -
Full Name: FSHD region gene 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 6373 bases
Position: chrKQ545416.1:550889-557261
Accession: ZDB-GENE-050417-324
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000021520	FRG1	PF06229.12	3.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000010790	-	471	-	ENSPLAP00000021520	156 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000005321's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000005321's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000005321	frg1	69	74.312	ENSG00000109536	FRG1	70	80.247	Homo_sapiens
ENSPLAG00000005321	frg1	83	75.969	ENSACLG00000027065	frg1	52	75.194	Astatotilapia_calliptera
ENSPLAG00000005321	frg1	63	54.545	ENSCSAVG00000008018	-	54	54.545	Ciona_savignyi
ENSPLAG00000005321	frg1	69	76.147	ENSCGRG00001014998	Frg1	50	76.147	Cricetulus_griseus_chok1gshd
ENSPLAG00000005321	frg1	69	66.667	ENSEBUG00000014053	frg1	61	66.667	Eptatretus_burgeri
ENSPLAG00000005321	frg1	69	72.477	ENSFDAG00000012697	-	50	72.477	Fukomys_damarensis
ENSPLAG00000005321	frg1	78	96.694	ENSGAFG00000013855	frg1	58	96.694	Gambusia_affinis
ENSPLAG00000005321	frg1	64	68.317	ENSGGOG00000012888	-	51	68.317	Gorilla_gorilla
ENSPLAG00000005321	frg1	83	75.969	ENSHBUG00000010667	frg1	52	75.194	Haplochromis_burtoni
ENSPLAG00000005321	frg1	71	83.636	ENSLBEG00000001466	frg1	54	83.495	Labrus_bergylta
ENSPLAG00000005321	frg1	78	68.033	ENSLAFG00000011191	FRG1	59	75.229	Loxodonta_africana
ENSPLAG00000005321	frg1	83	75.969	ENSMZEG00005007549	frg1	52	75.194	Maylandia_zebra
ENSPLAG00000005321	frg1	69	76.147	MGP_SPRETEiJ_G0032120	Frg1	55	88.136	Mus_spretus
ENSPLAG00000005321	frg1	69	74.312	ENSPPAG00000043170	-	50	74.312	Pan_paniscus
ENSPLAG00000005321	frg1	78	97.561	ENSPFOG00000006721	frg1	55	89.286	Poecilia_formosa
ENSPLAG00000005321	frg1	83	89.286	ENSPMEG00000013816	frg1	55	89.286	Poecilia_mexicana
ENSPLAG00000005321	frg1	78	97.521	ENSPREG00000000097	frg1	55	87.143	Poecilia_reticulata
ENSPLAG00000005321	frg1	51	79.012	ENSPPYG00000029810	-	56	79.012	Pongo_abelii
ENSPLAG00000005321	frg1	66	77.885	ENSPCOG00000022726	FRG1	62	74.545	Propithecus_coquereli
ENSPLAG00000005321	frg1	65	75.728	ENSSARG00000002471	-	58	72.477	Sorex_araneus
ENSPLAG00000005321	frg1	69	80.556	ENSSPUG00000017326	-	50	79.817	Sphenodon_punctatus
ENSPLAG00000005321	frg1	83	87.857	ENSXMAG00000007751	frg1	55	87.857	Xiphophorus_maculatus