EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000005343 (Gene tree)
Gene ID: 106947884
Gene Symbol: chd5
Alias: -
Full Name: chromodomain helicase DNA binding protein 5
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 24692 bases
Position: chrKQ545575.1:240106-264797
Accession: 106947884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000003728	ResIII	PF04851.15	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000010858	-	5586	XM_015033186	ENSPLAP00000003728	1861 (aa)	XP_014888672	-

Gene Model

Click here to download ENSPLAG00000005343's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000005343's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000005343	chd5	84	81.500	ENSPLAG00000012712	chd4a	88	81.500
ENSPLAG00000005343	chd5	80	78.279	ENSPLAG00000002887	chd3	83	80.556
ENSPLAG00000005343	chd5	81	76.856	ENSPLAG00000004006	-	94	71.186

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000005343	chd5	96	77.989	ENSG00000116254	CHD5	96	80.136	Homo_sapiens
ENSPLAG00000005343	chd5	96	74.893	ENSAMEG00000009880	CHD5	95	75.427	Ailuropoda_melanoleuca
ENSPLAG00000005343	chd5	99	89.125	ENSACIG00000012582	chd5	93	96.000	Amphilophus_citrinellus
ENSPLAG00000005343	chd5	96	94.245	ENSAOCG00000020356	chd5	89	94.245	Amphiprion_ocellaris
ENSPLAG00000005343	chd5	82	92.488	ENSAPLG00000015475	CHD5	90	85.714	Anas_platyrhynchos
ENSPLAG00000005343	chd5	95	75.633	ENSACAG00000002441	CHD5	88	80.769	Anolis_carolinensis
ENSPLAG00000005343	chd5	89	74.796	ENSANAG00000001078	CHD5	91	75.880	Aotus_nancymaae
ENSPLAG00000005343	chd5	99	83.951	ENSACLG00000003012	chd5	99	83.755	Astatotilapia_calliptera
ENSPLAG00000005343	chd5	94	75.701	ENSAMXG00000008921	chd5	99	87.353	Astyanax_mexicanus
ENSPLAG00000005343	chd5	96	74.327	ENSBTAG00000040477	CHD5	99	75.944	Bos_taurus
ENSPLAG00000005343	chd5	74	79.888	ENSCJAG00000000101	CHD5	94	75.908	Callithrix_jacchus
ENSPLAG00000005343	chd5	93	86.905	ENSCAFG00000019545	CHD5	99	75.996	Canis_familiaris
ENSPLAG00000005343	chd5	93	85.417	ENSCAFG00020008689	CHD5	91	77.325	Canis_lupus_dingo
ENSPLAG00000005343	chd5	99	73.605	ENSCHIG00000015027	CHD5	91	75.925	Capra_hircus
ENSPLAG00000005343	chd5	99	73.793	ENSTSYG00000033991	CHD5	94	74.598	Carlito_syrichta
ENSPLAG00000005343	chd5	96	77.188	ENSCAPG00000009294	CHD5	95	77.432	Cavia_aperea
ENSPLAG00000005343	chd5	96	77.243	ENSCPOG00000025080	CHD5	95	77.486	Cavia_porcellus
ENSPLAG00000005343	chd5	74	80.611	ENSCCAG00000024756	CHD5	88	85.897	Cebus_capucinus
ENSPLAG00000005343	chd5	96	75.594	ENSCATG00000043011	CHD5	94	76.613	Cercocebus_atys
ENSPLAG00000005343	chd5	92	85.000	ENSCLAG00000010589	CHD5	95	77.129	Chinchilla_lanigera
ENSPLAG00000005343	chd5	99	74.869	ENSCSAG00000000733	CHD5	94	76.543	Chlorocebus_sabaeus
ENSPLAG00000005343	chd5	96	74.662	ENSCPBG00000019363	CHD5	95	87.879	Chrysemys_picta_bellii
ENSPLAG00000005343	chd5	99	75.091	ENSCANG00000032302	CHD5	86	85.897	Colobus_angolensis_palliatus
ENSPLAG00000005343	chd5	56	77.205	ENSCGRG00001011042	Chd5	98	79.238	Cricetulus_griseus_chok1gshd
ENSPLAG00000005343	chd5	99	75.384	ENSCGRG00000011341	Chd5	97	76.562	Cricetulus_griseus_crigri
ENSPLAG00000005343	chd5	96	84.096	ENSDARG00000105083	chd5	88	97.436	Danio_rerio
ENSPLAG00000005343	chd5	90	70.667	ENSDARG00000025789	chd4b	93	66.338	Danio_rerio
ENSPLAG00000005343	chd5	95	75.628	ENSDNOG00000046342	CHD5	93	71.619	Dasypus_novemcinctus
ENSPLAG00000005343	chd5	99	73.569	ENSDORG00000005923	Chd5	95	76.726	Dipodomys_ordii
ENSPLAG00000005343	chd5	93	85.417	ENSEASG00005021464	CHD5	92	87.500	Equus_asinus_asinus
ENSPLAG00000005343	chd5	87	94.231	ENSECAG00000025043	CHD5	85	100.000	Equus_caballus
ENSPLAG00000005343	chd5	67	87.324	ENSEEUG00000002772	CHD5	63	87.324	Erinaceus_europaeus
ENSPLAG00000005343	chd5	99	81.764	ENSELUG00000010742	chd5	93	92.975	Esox_lucius
ENSPLAG00000005343	chd5	96	76.162	ENSFCAG00000006319	CHD5	94	76.335	Felis_catus
ENSPLAG00000005343	chd5	93	84.536	ENSFALG00000009740	CHD5	89	85.897	Ficedula_albicollis
ENSPLAG00000005343	chd5	96	76.193	ENSFDAG00000012881	CHD5	92	76.502	Fukomys_damarensis
ENSPLAG00000005343	chd5	92	85.000	ENSGALG00000000747	CHD5	89	85.897	Gallus_gallus
ENSPLAG00000005343	chd5	56	93.594	ENSGACG00000004389	chd5	90	93.818	Gasterosteus_aculeatus
ENSPLAG00000005343	chd5	92	85.417	ENSGAGG00000001590	CHD5	82	100.000	Gopherus_agassizii
ENSPLAG00000005343	chd5	96	78.049	ENSGGOG00000000708	CHD5	87	85.897	Gorilla_gorilla
ENSPLAG00000005343	chd5	99	84.166	ENSHBUG00000013453	chd5	99	83.972	Haplochromis_burtoni
ENSPLAG00000005343	chd5	93	84.211	ENSHGLG00000018184	CHD5	97	75.725	Heterocephalus_glaber_female
ENSPLAG00000005343	chd5	88	78.218	ENSHGLG00100013261	CHD5	92	70.708	Heterocephalus_glaber_male
ENSPLAG00000005343	chd5	96	81.658	ENSIPUG00000005446	chd5	93	90.909	Ictalurus_punctatus
ENSPLAG00000005343	chd5	99	75.663	ENSSTOG00000002778	CHD5	95	77.481	Ictidomys_tridecemlineatus
ENSPLAG00000005343	chd5	99	75.621	ENSJJAG00000019072	Chd5	96	76.997	Jaculus_jaculus
ENSPLAG00000005343	chd5	92	87.342	ENSLOCG00000004944	chd5	88	88.312	Lepisosteus_oculatus
ENSPLAG00000005343	chd5	99	75.065	ENSLAFG00000006348	CHD5	95	87.838	Loxodonta_africana
ENSPLAG00000005343	chd5	99	74.817	ENSMFAG00000033993	CHD5	99	76.499	Macaca_fascicularis
ENSPLAG00000005343	chd5	99	76.649	ENSMMUG00000016838	CHD5	93	77.729	Macaca_mulatta
ENSPLAG00000005343	chd5	99	74.869	ENSMNEG00000040044	CHD5	87	85.897	Macaca_nemestrina
ENSPLAG00000005343	chd5	99	71.856	ENSMLEG00000039166	CHD5	88	85.897	Mandrillus_leucophaeus
ENSPLAG00000005343	chd5	99	83.076	ENSMZEG00005000841	chd5	99	83.200	Maylandia_zebra
ENSPLAG00000005343	chd5	93	85.000	ENSMGAG00000001055	CHD5	94	75.200	Meleagris_gallopavo
ENSPLAG00000005343	chd5	91	80.339	ENSMICG00000017862	CHD5	91	80.374	Microcebus_murinus
ENSPLAG00000005343	chd5	99	75.490	ENSMOCG00000011049	Chd5	95	76.940	Microtus_ochrogaster
ENSPLAG00000005343	chd5	63	87.747	ENSMODG00000006294	CHD5	63	85.897	Monodelphis_domestica
ENSPLAG00000005343	chd5	99	88.783	ENSMALG00000002831	chd5	98	88.716	Monopterus_albus
ENSPLAG00000005343	chd5	99	75.274	MGP_CAROLIEiJ_G0026857	Chd5	96	75.670	Mus_caroli
ENSPLAG00000005343	chd5	96	76.856	ENSMUSG00000005045	Chd5	95	76.549	Mus_musculus
ENSPLAG00000005343	chd5	99	76.552	MGP_PahariEiJ_G0029205	Chd5	95	76.964	Mus_pahari
ENSPLAG00000005343	chd5	99	76.163	MGP_SPRETEiJ_G0027850	Chd5	95	76.857	Mus_spretus
ENSPLAG00000005343	chd5	96	77.168	ENSMPUG00000007122	CHD5	94	74.817	Mustela_putorius_furo
ENSPLAG00000005343	chd5	99	74.519	ENSNGAG00000019812	Chd5	93	74.934	Nannospalax_galili
ENSPLAG00000005343	chd5	96	76.083	ENSNLEG00000010320	CHD5	95	74.009	Nomascus_leucogenys
ENSPLAG00000005343	chd5	83	73.112	ENSOPRG00000004304	CHD5	77	85.897	Ochotona_princeps
ENSPLAG00000005343	chd5	92	85.000	ENSODEG00000010262	CHD5	95	77.432	Octodon_degus
ENSPLAG00000005343	chd5	96	93.617	ENSONIG00000000619	chd5	92	93.617	Oreochromis_niloticus
ENSPLAG00000005343	chd5	94	85.417	ENSOANG00000001819	CHD5	91	85.897	Ornithorhynchus_anatinus
ENSPLAG00000005343	chd5	97	75.358	ENSOGAG00000005703	CHD5	94	75.735	Otolemur_garnettii
ENSPLAG00000005343	chd5	94	73.825	ENSOARG00000013425	CHD5	93	75.068	Ovis_aries
ENSPLAG00000005343	chd5	96	77.943	ENSPPAG00000034048	CHD5	88	85.897	Pan_paniscus
ENSPLAG00000005343	chd5	96	75.642	ENSPPRG00000009453	CHD5	93	75.602	Panthera_pardus
ENSPLAG00000005343	chd5	96	70.469	ENSPTIG00000013926	CHD5	95	71.291	Panthera_tigris_altaica
ENSPLAG00000005343	chd5	96	77.943	ENSPTRG00000000075	CHD5	88	85.897	Pan_troglodytes
ENSPLAG00000005343	chd5	99	74.974	ENSPANG00000006765	CHD5	87	85.897	Papio_anubis
ENSPLAG00000005343	chd5	88	91.286	ENSPKIG00000004282	chd5	91	91.286	Paramormyrops_kingsleyae
ENSPLAG00000005343	chd5	84	82.547	ENSPSIG00000006414	CHD5	93	83.333	Pelodiscus_sinensis
ENSPLAG00000005343	chd5	66	78.068	ENSPEMG00000014799	Chd5	96	79.665	Peromyscus_maniculatus_bairdii
ENSPLAG00000005343	chd5	96	77.171	ENSPCIG00000028310	CHD5	88	85.897	Phascolarctos_cinereus
ENSPLAG00000005343	chd5	90	87.952	ENSPPYG00000001952	CHD5	92	82.867	Pongo_abelii
ENSPLAG00000005343	chd5	93	79.081	ENSPCOG00000022930	CHD5	88	85.897	Propithecus_coquereli
ENSPLAG00000005343	chd5	99	88.179	ENSPNYG00000003183	chd5	99	88.179	Pundamilia_nyererei
ENSPLAG00000005343	chd5	99	74.466	ENSRNOG00000011268	Chd5	96	75.696	Rattus_norvegicus
ENSPLAG00000005343	chd5	88	87.952	ENSRBIG00000032140	CHD5	87	85.897	Rhinopithecus_bieti
ENSPLAG00000005343	chd5	99	74.660	ENSRROG00000041146	CHD5	87	84.615	Rhinopithecus_roxellana
ENSPLAG00000005343	chd5	89	78.692	ENSSBOG00000001955	CHD5	99	78.386	Saimiri_boliviensis_boliviensis
ENSPLAG00000005343	chd5	92	85.897	ENSSHAG00000018641	CHD5	97	70.733	Sarcophilus_harrisii
ENSPLAG00000005343	chd5	96	83.569	ENSSFOG00015006296	chd5	93	89.007	Scleropages_formosus
ENSPLAG00000005343	chd5	90	99.583	ENSSDUG00000017526	chd5	96	99.583	Seriola_dumerili
ENSPLAG00000005343	chd5	95	77.105	ENSSPUG00000010622	CHD5	89	87.179	Sphenodon_punctatus
ENSPLAG00000005343	chd5	96	75.972	ENSSSCG00000003366	CHD5	99	75.914	Sus_scrofa
ENSPLAG00000005343	chd5	94	72.107	ENSTGUG00000002634	-	92	85.897	Taeniopygia_guttata
ENSPLAG00000005343	chd5	50	96.296	ENSTNIG00000004346	chd5	91	97.436	Tetraodon_nigroviridis
ENSPLAG00000005343	chd5	96	76.193	ENSTTRG00000010468	CHD5	94	76.410	Tursiops_truncatus
ENSPLAG00000005343	chd5	99	76.492	ENSUAMG00000024509	CHD5	92	87.442	Ursus_americanus
ENSPLAG00000005343	chd5	99	72.434	ENSUMAG00000024173	CHD5	95	73.159	Ursus_maritimus
ENSPLAG00000005343	chd5	93	85.417	ENSVVUG00000026480	CHD5	88	92.000	Vulpes_vulpes
ENSPLAG00000005343	chd5	99	72.205	ENSXETG00000002904	chd5	97	73.558	Xenopus_tropicalis
ENSPLAG00000005343	chd5	61	95.085	ENSXCOG00000014202	chd5	99	95.085	Xiphophorus_couchianus