EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000005376 (Gene tree)
Gene ID: 106958274
Gene Symbol: GFI1 (1 of many)
Alias: -
Full Name: zinc finger protein Gfi-1-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 4290 bases
Position: chrKQ546290.1:186259-190548
Accession: 106958274
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000021550	zf-C2H2	PF00096.26	8.3e-25	1	5
ENSPLAP00000021550	zf-C2H2	PF00096.26	8.3e-25	2	5
ENSPLAP00000021550	zf-C2H2	PF00096.26	8.3e-25	3	5
ENSPLAP00000021550	zf-C2H2	PF00096.26	8.3e-25	4	5
ENSPLAP00000021550	zf-C2H2	PF00096.26	8.3e-25	5	5
ENSPLAP00000021550	zf-met	PF12874.7	6.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000010700	GFI1 (1 of many)-201	1690	XM_015050081	ENSPLAP00000021550	444 (aa)	XP_014905567	UPI00072DCC83

Gene Model

Click here to download ENSPLAG00000005376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000005376's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000005376	GFI1	51	39.286	ENSPLAG00000000470	-	57	39.286
ENSPLAG00000005376	GFI1	91	50.000	ENSPLAG00000017181	GFI1B	51	86.550
ENSPLAG00000005376	GFI1	57	41.875	ENSPLAG00000016013	-	99	43.119
ENSPLAG00000005376	GFI1	91	61.836	ENSPLAG00000010879	gfi1ab	100	76.316
ENSPLAG00000005376	GFI1	67	42.262	ENSPLAG00000016823	-	98	42.236
ENSPLAG00000005376	GFI1	69	41.520	ENSPLAG00000010431	-	66	41.520
ENSPLAG00000005376	GFI1	77	46.099	ENSPLAG00000019775	-	95	46.099
ENSPLAG00000005376	GFI1	52	38.776	ENSPLAG00000020760	-	71	38.776
ENSPLAG00000005376	GFI1	80	35.404	ENSPLAG00000009651	-	66	45.455
ENSPLAG00000005376	GFI1	91	49.522	ENSPLAG00000021960	GFI1B	52	86.550
ENSPLAG00000005376	GFI1	54	40.588	ENSPLAG00000008691	-	65	36.207
ENSPLAG00000005376	GFI1	80	41.772	ENSPLAG00000009662	-	63	41.772

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000005376	GFI1	91	60.930	ENSG00000162676	GFI1	100	61.215	Homo_sapiens
ENSPLAG00000005376	GFI1	91	62.808	ENSAPOG00000015189	gfi1ab	100	60.247	Acanthochromis_polyacanthus
ENSPLAG00000005376	GFI1	91	62.044	ENSACIG00000016354	gfi1ab	100	60.584	Amphilophus_citrinellus
ENSPLAG00000005376	GFI1	91	54.167	ENSAOCG00000008339	gfi1ab	100	52.206	Amphiprion_ocellaris
ENSPLAG00000005376	GFI1	91	63.054	ENSAPEG00000023870	gfi1ab	100	59.951	Amphiprion_percula
ENSPLAG00000005376	GFI1	93	58.273	ENSATEG00000009167	gfi1ab	92	55.344	Anabas_testudineus
ENSPLAG00000005376	GFI1	77	61.648	ENSAPLG00000015700	GFI1	86	65.789	Anas_platyrhynchos
ENSPLAG00000005376	GFI1	91	61.391	ENSACAG00000004498	GFI1	100	60.437	Anolis_carolinensis
ENSPLAG00000005376	GFI1	91	58.652	ENSANAG00000019656	GFI1	100	60.698	Aotus_nancymaae
ENSPLAG00000005376	GFI1	91	61.893	ENSACLG00000026458	gfi1ab	93	60.533	Astatotilapia_calliptera
ENSPLAG00000005376	GFI1	91	60.855	ENSAMXG00000006669	GFI1	100	72.973	Astyanax_mexicanus
ENSPLAG00000005376	GFI1	91	61.071	ENSAMXG00000039600	gfi1ab	100	57.908	Astyanax_mexicanus
ENSPLAG00000005376	GFI1	91	58.000	ENSBTAG00000016723	GFI1	100	59.028	Bos_taurus
ENSPLAG00000005376	GFI1	91	60.092	ENSCJAG00000017609	GFI1	100	59.080	Callithrix_jacchus
ENSPLAG00000005376	GFI1	91	60.606	ENSCAFG00000020155	GFI1	100	58.986	Canis_familiaris
ENSPLAG00000005376	GFI1	96	58.590	ENSCAFG00020013371	GFI1	94	57.081	Canis_lupus_dingo
ENSPLAG00000005376	GFI1	91	59.193	ENSCHIG00000016135	GFI1	100	59.491	Capra_hircus
ENSPLAG00000005376	GFI1	91	61.502	ENSCPOG00000011727	GFI1	100	59.165	Cavia_porcellus
ENSPLAG00000005376	GFI1	91	60.557	ENSCCAG00000036072	GFI1	100	61.538	Cebus_capucinus
ENSPLAG00000005376	GFI1	91	60.000	ENSCATG00000037873	GFI1	100	58.891	Cercocebus_atys
ENSPLAG00000005376	GFI1	91	63.789	ENSCLAG00000005915	GFI1	100	59.453	Chinchilla_lanigera
ENSPLAG00000005376	GFI1	90	54.111	ENSCSAG00000001469	GFI1	100	53.723	Chlorocebus_sabaeus
ENSPLAG00000005376	GFI1	91	59.770	ENSCANG00000034077	GFI1	100	58.661	Colobus_angolensis_palliatus
ENSPLAG00000005376	GFI1	91	60.233	ENSCGRG00001015432	Gfi1	100	60.000	Cricetulus_griseus_chok1gshd
ENSPLAG00000005376	GFI1	91	74.328	ENSCSEG00000017729	GFI1	100	74.328	Cynoglossus_semilaevis
ENSPLAG00000005376	GFI1	91	82.310	ENSCVAG00000004930	GFI1	100	82.310	Cyprinodon_variegatus
ENSPLAG00000005376	GFI1	91	61.330	ENSCVAG00000011828	gfi1ab	100	61.084	Cyprinodon_variegatus
ENSPLAG00000005376	GFI1	91	63.235	ENSDARG00000044457	gfi1ab	100	62.990	Danio_rerio
ENSPLAG00000005376	GFI1	91	59.020	ENSDNOG00000000782	GFI1	99	58.150	Dasypus_novemcinctus
ENSPLAG00000005376	GFI1	99	57.511	ENSEASG00005015509	GFI1	94	58.584	Equus_asinus_asinus
ENSPLAG00000005376	GFI1	90	55.858	ENSECAG00000006647	GFI1	86	57.221	Equus_caballus
ENSPLAG00000005376	GFI1	91	60.570	ENSEEUG00000000198	GFI1	100	60.140	Erinaceus_europaeus
ENSPLAG00000005376	GFI1	91	64.216	ENSELUG00000019033	GFI1	100	63.971	Esox_lucius
ENSPLAG00000005376	GFI1	91	64.792	ENSELUG00000003015	gfi1ab	99	64.548	Esox_lucius
ENSPLAG00000005376	GFI1	91	61.628	ENSFCAG00000005914	GFI1	100	60.606	Felis_catus
ENSPLAG00000005376	GFI1	91	61.893	ENSFHEG00000010997	gfi1ab	100	59.709	Fundulus_heteroclitus
ENSPLAG00000005376	GFI1	91	85.891	ENSFHEG00000000341	GFI1	100	90.099	Fundulus_heteroclitus
ENSPLAG00000005376	GFI1	91	61.330	ENSGMOG00000007737	gfi1ab	100	59.852	Gadus_morhua
ENSPLAG00000005376	GFI1	91	61.501	ENSGALG00000043650	GFI1	100	61.501	Gallus_gallus
ENSPLAG00000005376	GFI1	91	61.353	ENSGAFG00000016637	gfi1ab	100	61.111	Gambusia_affinis
ENSPLAG00000005376	GFI1	91	96.269	ENSGAFG00000018063	GFI1	100	96.269	Gambusia_affinis
ENSPLAG00000005376	GFI1	91	62.255	ENSGACG00000004257	gfi1ab	97	62.255	Gasterosteus_aculeatus
ENSPLAG00000005376	GFI1	91	60.930	ENSGGOG00000005320	GFI1	100	61.215	Gorilla_gorilla
ENSPLAG00000005376	GFI1	91	60.976	ENSHBUG00000011969	gfi1ab	100	59.268	Haplochromis_burtoni
ENSPLAG00000005376	GFI1	95	60.762	ENSHGLG00000008020	GFI1	100	61.663	Heterocephalus_glaber_female
ENSPLAG00000005376	GFI1	95	60.762	ENSHGLG00100000610	GFI1	100	61.663	Heterocephalus_glaber_male
ENSPLAG00000005376	GFI1	91	53.846	ENSHCOG00000008590	gfi1ab	72	61.000	Hippocampus_comes
ENSPLAG00000005376	GFI1	91	68.506	ENSHCOG00000019555	GFI1	100	68.182	Hippocampus_comes
ENSPLAG00000005376	GFI1	91	60.147	ENSIPUG00000013414	GFI1	100	59.413	Ictalurus_punctatus
ENSPLAG00000005376	GFI1	96	59.954	ENSIPUG00000010071	gfi1ab	88	61.098	Ictalurus_punctatus
ENSPLAG00000005376	GFI1	91	58.986	ENSSTOG00000014583	GFI1	100	57.834	Ictidomys_tridecemlineatus
ENSPLAG00000005376	GFI1	91	60.870	ENSKMAG00000003810	gfi1ab	100	58.394	Kryptolebias_marmoratus
ENSPLAG00000005376	GFI1	91	61.425	ENSLBEG00000027776	gfi1ab	100	59.459	Labrus_bergylta
ENSPLAG00000005376	GFI1	91	72.775	ENSLACG00000017590	-	58	72.775	Latimeria_chalumnae
ENSPLAG00000005376	GFI1	92	61.429	ENSLACG00000013362	GFI1	99	57.209	Latimeria_chalumnae
ENSPLAG00000005376	GFI1	91	64.059	ENSLOCG00000004711	gfi1ab	100	64.059	Lepisosteus_oculatus
ENSPLAG00000005376	GFI1	91	61.792	ENSLAFG00000018346	GFI1	100	58.974	Loxodonta_africana
ENSPLAG00000005376	GFI1	91	60.000	ENSMFAG00000045801	GFI1	100	58.891	Macaca_fascicularis
ENSPLAG00000005376	GFI1	91	60.000	ENSMNEG00000036338	GFI1	100	58.891	Macaca_nemestrina
ENSPLAG00000005376	GFI1	91	60.000	ENSMLEG00000036181	GFI1	100	58.891	Mandrillus_leucophaeus
ENSPLAG00000005376	GFI1	91	62.287	ENSMAMG00000008125	gfi1ab	100	61.314	Mastacembelus_armatus
ENSPLAG00000005376	GFI1	91	61.893	ENSMZEG00005009895	gfi1ab	100	60.533	Maylandia_zebra
ENSPLAG00000005376	GFI1	78	63.456	ENSMGAG00000008187	GFI1	90	66.352	Meleagris_gallopavo
ENSPLAG00000005376	GFI1	91	57.428	ENSMICG00000047208	GFI1	100	58.756	Microcebus_murinus
ENSPLAG00000005376	GFI1	91	59.413	ENSMMOG00000005556	gfi1ab	100	58.680	Mola_mola
ENSPLAG00000005376	GFI1	91	61.792	ENSMODG00000011802	GFI1	100	61.792	Monodelphis_domestica
ENSPLAG00000005376	GFI1	91	60.097	ENSMALG00000014672	gfi1ab	100	58.738	Monopterus_albus
ENSPLAG00000005376	GFI1	97	58.280	MGP_CAROLIEiJ_G0027508	Gfi1	100	96.296	Mus_caroli
ENSPLAG00000005376	GFI1	97	58.051	ENSMUSG00000029275	Gfi1	100	59.767	Mus_musculus
ENSPLAG00000005376	GFI1	97	58.584	MGP_PahariEiJ_G0017280	Gfi1	100	96.296	Mus_pahari
ENSPLAG00000005376	GFI1	97	58.584	MGP_SPRETEiJ_G0028507	Gfi1	100	59.767	Mus_spretus
ENSPLAG00000005376	GFI1	93	62.560	ENSMPUG00000004178	GFI1	99	62.830	Mustela_putorius_furo
ENSPLAG00000005376	GFI1	91	57.528	ENSMLUG00000015191	GFI1	97	59.719	Myotis_lucifugus
ENSPLAG00000005376	GFI1	91	61.836	ENSNBRG00000015774	gfi1ab	100	59.662	Neolamprologus_brichardi
ENSPLAG00000005376	GFI1	80	60.836	ENSNLEG00000010470	GFI1	85	63.953	Nomascus_leucogenys
ENSPLAG00000005376	GFI1	91	60.930	ENSOPRG00000001473	GFI1	100	60.698	Ochotona_princeps
ENSPLAG00000005376	GFI1	91	61.893	ENSONIG00000019246	gfi1ab	100	61.650	Oreochromis_niloticus
ENSPLAG00000005376	GFI1	90	54.354	ENSOCUG00000023553	GFI1	93	54.960	Oryctolagus_cuniculus
ENSPLAG00000005376	GFI1	91	72.482	ENSORLG00000005060	GFI1	100	70.297	Oryzias_latipes
ENSPLAG00000005376	GFI1	91	60.644	ENSORLG00000013806	gfi1ab	100	57.805	Oryzias_latipes
ENSPLAG00000005376	GFI1	91	60.784	ENSORLG00020001602	gfi1ab	100	57.805	Oryzias_latipes_hni
ENSPLAG00000005376	GFI1	76	82.051	ENSORLG00020002817	GFI1	100	82.051	Oryzias_latipes_hni
ENSPLAG00000005376	GFI1	91	72.616	ENSORLG00015006070	GFI1	100	69.927	Oryzias_latipes_hsok
ENSPLAG00000005376	GFI1	91	74.010	ENSOMEG00000016722	GFI1	100	74.257	Oryzias_melastigma
ENSPLAG00000005376	GFI1	91	60.934	ENSOGAG00000027913	GFI1	100	59.080	Otolemur_garnettii
ENSPLAG00000005376	GFI1	91	61.975	ENSPPAG00000042186	GFI1	100	61.481	Pan_paniscus
ENSPLAG00000005376	GFI1	91	61.628	ENSPPRG00000007521	GFI1	100	60.606	Panthera_pardus
ENSPLAG00000005376	GFI1	91	60.698	ENSPTRG00000043053	GFI1	100	62.005	Pan_troglodytes
ENSPLAG00000005376	GFI1	91	60.000	ENSPANG00000016433	GFI1	100	58.891	Papio_anubis
ENSPLAG00000005376	GFI1	91	64.563	ENSPKIG00000004263	GFI1	100	64.320	Paramormyrops_kingsleyae
ENSPLAG00000005376	GFI1	78	63.173	ENSPSIG00000008734	GFI1	87	65.517	Pelodiscus_sinensis
ENSPLAG00000005376	GFI1	90	57.143	ENSPMGG00000011041	GFI1	99	56.642	Periophthalmus_magnuspinnatus
ENSPLAG00000005376	GFI1	91	61.330	ENSPMGG00000012546	gfi1ab	100	61.084	Periophthalmus_magnuspinnatus
ENSPLAG00000005376	GFI1	91	62.530	ENSPCIG00000013728	GFI1	100	61.827	Phascolarctos_cinereus
ENSPLAG00000005376	GFI1	91	61.836	ENSPFOG00000023214	gfi1ab	100	61.594	Poecilia_formosa
ENSPLAG00000005376	GFI1	91	61.836	ENSPMEG00000013694	gfi1ab	100	61.594	Poecilia_mexicana
ENSPLAG00000005376	GFI1	91	98.507	ENSPMEG00000019299	GFI1	100	98.507	Poecilia_mexicana
ENSPLAG00000005376	GFI1	91	61.893	ENSPREG00000014097	gfi1ab	100	60.922	Poecilia_reticulata
ENSPLAG00000005376	GFI1	91	85.612	ENSPREG00000007997	GFI1	100	85.372	Poecilia_reticulata
ENSPLAG00000005376	GFI1	91	50.461	ENSPCAG00000011020	GFI1	100	50.461	Procavia_capensis
ENSPLAG00000005376	GFI1	91	58.621	ENSPCOG00000020540	GFI1	100	58.851	Propithecus_coquereli
ENSPLAG00000005376	GFI1	91	62.972	ENSPVAG00000006928	GFI1	100	58.296	Pteropus_vampyrus
ENSPLAG00000005376	GFI1	91	61.893	ENSPNYG00000021183	gfi1ab	100	60.533	Pundamilia_nyererei
ENSPLAG00000005376	GFI1	91	60.244	ENSPNAG00000027258	gfi1ab	100	58.738	Pygocentrus_nattereri
ENSPLAG00000005376	GFI1	91	65.432	ENSPNAG00000014299	-	53	65.432	Pygocentrus_nattereri
ENSPLAG00000005376	GFI1	91	57.561	ENSPNAG00000028014	GFI1	100	56.000	Pygocentrus_nattereri
ENSPLAG00000005376	GFI1	91	60.557	ENSRNOG00000002042	Gfi1	100	60.140	Rattus_norvegicus
ENSPLAG00000005376	GFI1	91	60.000	ENSRBIG00000036467	GFI1	100	58.891	Rhinopithecus_bieti
ENSPLAG00000005376	GFI1	91	60.000	ENSRROG00000031687	GFI1	100	58.891	Rhinopithecus_roxellana
ENSPLAG00000005376	GFI1	91	60.557	ENSSBOG00000031300	GFI1	100	60.606	Saimiri_boliviensis_boliviensis
ENSPLAG00000005376	GFI1	91	64.706	ENSSFOG00015020295	gfi1	100	64.706	Scleropages_formosus
ENSPLAG00000005376	GFI1	91	62.683	ENSSMAG00000002782	gfi1ab	100	60.680	Scophthalmus_maximus
ENSPLAG00000005376	GFI1	91	61.235	ENSSDUG00000022410	gfi1ab	100	59.360	Seriola_dumerili
ENSPLAG00000005376	GFI1	91	61.481	ENSSLDG00000020163	gfi1ab	100	59.606	Seriola_lalandi_dorsalis
ENSPLAG00000005376	GFI1	72	78.788	ENSSPAG00000009140	gfi1ab	99	81.250	Stegastes_partitus
ENSPLAG00000005376	GFI1	91	60.544	ENSSSCG00000006902	GFI1	100	60.981	Sus_scrofa
ENSPLAG00000005376	GFI1	74	65.179	ENSTGUG00000006060	GFI1	90	66.456	Taeniopygia_guttata
ENSPLAG00000005376	GFI1	91	61.235	ENSTRUG00000000415	gfi1ab	100	60.988	Takifugu_rubripes
ENSPLAG00000005376	GFI1	91	59.753	ENSTNIG00000000651	gfi1ab	97	59.012	Tetraodon_nigroviridis
ENSPLAG00000005376	GFI1	91	60.135	ENSTTRG00000000082	GFI1	100	57.848	Tursiops_truncatus
ENSPLAG00000005376	GFI1	91	60.880	ENSUAMG00000021124	GFI1	91	60.000	Ursus_americanus
ENSPLAG00000005376	GFI1	91	60.680	ENSXETG00000023006	gfi1	98	59.472	Xenopus_tropicalis
ENSPLAG00000005376	GFI1	91	95.087	ENSXMAG00000009274	GFI1	70	94.798	Xiphophorus_maculatus
ENSPLAG00000005376	GFI1	91	61.111	ENSXMAG00000010523	gfi1ab	100	60.870	Xiphophorus_maculatus