EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000005508 (Gene tree)
Gene ID: 106953073
Gene Symbol: srsf5a
Alias: -
Full Name: serine and arginine rich splicing factor 5
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 5709 bases
Position: chrKQ545874.1:41040-46748
Accession: 106953073
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000003910	RRM_1	PF00076.22	6.1e-32	1	2
ENSPLAP00000003910	RRM_1	PF00076.22	6.1e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000010540	-	1928	XM_015041599	ENSPLAP00000003910	321 (aa)	XP_014897085	UPI00072DD1B8

Gene Model

Click here to download ENSPLAG00000005508's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000005508's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000005508	srsf5a	72	34.766	ENSPLAG00000019553	-	84	40.642
ENSPLAG00000005508	srsf5a	65	40.553	ENSPLAG00000008416	srsf1b	81	40.553
ENSPLAG00000005508	srsf5a	72	34.766	ENSPLAG00000019613	-	65	38.021
ENSPLAG00000005508	srsf5a	58	60.638	ENSPLAG00000009243	srsf6a	82	54.412
ENSPLAG00000005508	srsf5a	59	54.592	ENSPLAG00000008812	srsf4	63	55.319
ENSPLAG00000005508	srsf5a	56	40.000	ENSPLAG00000022740	srsf9	68	41.935
ENSPLAG00000005508	srsf5a	83	55.474	ENSPLAG00000006480	srsf5b	61	67.725

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000005508	srsf5a	77	68.145	ENSAPOG00000017395	srsf5a	80	77.953	Acanthochromis_polyacanthus
ENSPLAG00000005508	srsf5a	85	73.529	ENSACIG00000011892	srsf5a	97	75.540	Amphilophus_citrinellus
ENSPLAG00000005508	srsf5a	77	68.952	ENSAOCG00000014967	srsf5a	82	79.134	Amphiprion_ocellaris
ENSPLAG00000005508	srsf5a	77	68.952	ENSAPEG00000009297	srsf5a	82	79.134	Amphiprion_percula
ENSPLAG00000005508	srsf5a	88	75.887	ENSATEG00000000198	srsf5a	83	81.496	Anabas_testudineus
ENSPLAG00000005508	srsf5a	59	70.312	ENSAPLG00000002469	-	69	69.271	Anas_platyrhynchos
ENSPLAG00000005508	srsf5a	76	69.672	ENSACAG00000029015	-	68	70.000	Anolis_carolinensis
ENSPLAG00000005508	srsf5a	77	82.661	ENSACLG00000027166	srsf5a	82	83.071	Astatotilapia_calliptera
ENSPLAG00000005508	srsf5a	59	77.436	ENSAMXG00000030476	srsf5a	67	78.421	Astyanax_mexicanus
ENSPLAG00000005508	srsf5a	59	72.775	ENSCPBG00000021518	-	70	71.728	Chrysemys_picta_bellii
ENSPLAG00000005508	srsf5a	60	57.868	ENSCSAVG00000011376	-	78	57.789	Ciona_savignyi
ENSPLAG00000005508	srsf5a	78	83.399	ENSCSEG00000008109	srsf5a	78	82.812	Cynoglossus_semilaevis
ENSPLAG00000005508	srsf5a	78	94.024	ENSCVAG00000016982	srsf5a	98	95.556	Cyprinodon_variegatus
ENSPLAG00000005508	srsf5a	60	78.866	ENSDARG00000029818	srsf5a	99	74.820	Danio_rerio
ENSPLAG00000005508	srsf5a	77	64.615	ENSELUG00000020439	srsf5a	62	76.531	Esox_lucius
ENSPLAG00000005508	srsf5a	71	71.491	ENSFALG00000005098	-	63	70.000	Ficedula_albicollis
ENSPLAG00000005508	srsf5a	80	91.729	ENSFHEG00000003955	srsf5a	99	90.476	Fundulus_heteroclitus
ENSPLAG00000005508	srsf5a	59	79.474	ENSGMOG00000000869	srsf5a	94	78.421	Gadus_morhua
ENSPLAG00000005508	srsf5a	64	69.903	ENSGALG00000033259	SRSF5A	63	69.474	Gallus_gallus
ENSPLAG00000005508	srsf5a	93	79.612	ENSGAFG00000018237	srsf5a	93	79.288	Gambusia_affinis
ENSPLAG00000005508	srsf5a	59	82.105	ENSGACG00000011761	srsf5a	70	82.105	Gasterosteus_aculeatus
ENSPLAG00000005508	srsf5a	59	72.775	ENSGAGG00000007312	-	70	71.728	Gopherus_agassizii
ENSPLAG00000005508	srsf5a	77	82.661	ENSHBUG00000014048	srsf5a	82	83.465	Haplochromis_burtoni
ENSPLAG00000005508	srsf5a	59	83.684	ENSHCOG00000017557	srsf5a	61	83.684	Hippocampus_comes
ENSPLAG00000005508	srsf5a	59	76.000	ENSIPUG00000003439	srsf5a	68	80.526	Ictalurus_punctatus
ENSPLAG00000005508	srsf5a	59	83.684	ENSKMAG00000014937	srsf5a	90	76.603	Kryptolebias_marmoratus
ENSPLAG00000005508	srsf5a	59	85.567	ENSLBEG00000017153	srsf5a	73	85.567	Labrus_bergylta
ENSPLAG00000005508	srsf5a	59	74.737	ENSLACG00000017874	-	69	74.737	Latimeria_chalumnae
ENSPLAG00000005508	srsf5a	78	76.892	ENSMAMG00000000192	srsf5a	83	77.559	Mastacembelus_armatus
ENSPLAG00000005508	srsf5a	77	82.661	ENSMZEG00005010485	srsf5a	82	83.465	Maylandia_zebra
ENSPLAG00000005508	srsf5a	63	68.966	ENSMGAG00000011888	-	95	69.186	Meleagris_gallopavo
ENSPLAG00000005508	srsf5a	99	67.085	ENSMMOG00000009793	srsf5a	79	76.772	Mola_mola
ENSPLAG00000005508	srsf5a	89	69.930	ENSMALG00000021194	srsf5a	81	73.228	Monopterus_albus
ENSPLAG00000005508	srsf5a	77	82.258	ENSNBRG00000000771	srsf5a	82	82.677	Neolamprologus_brichardi
ENSPLAG00000005508	srsf5a	77	82.258	ENSONIG00000019583	srsf5a	82	82.677	Oreochromis_niloticus
ENSPLAG00000005508	srsf5a	77	81.452	ENSORLG00000009268	srsf5a	85	80.709	Oryzias_latipes
ENSPLAG00000005508	srsf5a	77	81.452	ENSORLG00020003281	srsf5	85	80.709	Oryzias_latipes_hni
ENSPLAG00000005508	srsf5a	77	81.452	ENSORLG00015023075	srsf5	85	80.709	Oryzias_latipes_hsok
ENSPLAG00000005508	srsf5a	77	81.452	ENSOMEG00000000628	srsf5a	85	81.102	Oryzias_melastigma
ENSPLAG00000005508	srsf5a	59	77.551	ENSPKIG00000002054	srsf5a	68	79.474	Paramormyrops_kingsleyae
ENSPLAG00000005508	srsf5a	76	67.755	ENSPSIG00000008238	-	68	69.110	Pelodiscus_sinensis
ENSPLAG00000005508	srsf5a	79	61.417	ENSPMGG00000020125	srsf5a	73	59.843	Periophthalmus_magnuspinnatus
ENSPLAG00000005508	srsf5a	99	100.000	ENSPFOG00000022993	srsf5a	99	100.000	Poecilia_formosa
ENSPLAG00000005508	srsf5a	99	99.373	ENSPMEG00000016339	srsf5a	99	99.373	Poecilia_mexicana
ENSPLAG00000005508	srsf5a	99	97.500	ENSPREG00000018091	srsf5a	99	97.500	Poecilia_reticulata
ENSPLAG00000005508	srsf5a	77	82.661	ENSPNYG00000021245	srsf5a	82	83.465	Pundamilia_nyererei
ENSPLAG00000005508	srsf5a	59	78.947	ENSPNAG00000021333	srsf5a	65	78.947	Pygocentrus_nattereri
ENSPLAG00000005508	srsf5a	78	75.486	ENSSFOG00015008377	srsf5	66	80.000	Scleropages_formosus
ENSPLAG00000005508	srsf5a	83	75.451	ENSSMAG00000010899	srsf5a	65	85.427	Scophthalmus_maximus
ENSPLAG00000005508	srsf5a	78	66.932	ENSSDUG00000006103	srsf5a	81	77.559	Seriola_dumerili
ENSPLAG00000005508	srsf5a	78	67.331	ENSSLDG00000004146	srsf5a	81	77.953	Seriola_lalandi_dorsalis
ENSPLAG00000005508	srsf5a	59	68.421	ENSSPUG00000002052	-	68	66.842	Sphenodon_punctatus
ENSPLAG00000005508	srsf5a	77	76.613	ENSSPAG00000002821	srsf5a	81	77.559	Stegastes_partitus
ENSPLAG00000005508	srsf5a	71	71.930	ENSTGUG00000011492	-	68	70.000	Taeniopygia_guttata
ENSPLAG00000005508	srsf5a	99	66.460	ENSTRUG00000022908	srsf5a	82	80.000	Takifugu_rubripes
ENSPLAG00000005508	srsf5a	60	70.500	ENSXETG00000017937	srsf5a	71	75.393	Xenopus_tropicalis
ENSPLAG00000005508	srsf5a	99	80.564	ENSXCOG00000015338	srsf5a	99	90.373	Xiphophorus_couchianus
ENSPLAG00000005508	srsf5a	99	95.950	ENSXMAG00000012823	srsf5a	99	95.950	Xiphophorus_maculatus