EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000005628 (Gene tree)
Gene ID: 106936681
Gene Symbol: rab42a
Alias: -
Full Name: ras-related protein Rab-39B-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 4785 bases
Position: chrKQ547501.1:66884-71668
Accession: 106936681
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000004022	MMR_HSR1	PF01926.23	4.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000010352	-	657	XM_015017823	ENSPLAP00000004022	218 (aa)	XP_014873309	-

Gene Model

Click here to download ENSPLAG00000005628's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000005628's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000005628	rab42a	100	54.128	ENSPLAG00000007237	RAB39B	100	54.128
ENSPLAG00000005628	rab42a	76	41.212	ENSPLAG00000010104	rab18a	80	41.212
ENSPLAG00000005628	rab42a	85	41.398	ENSPLAG00000001598	rab11bb	84	41.398
ENSPLAG00000005628	rab42a	67	44.595	ENSPLAG00000021278	rab33ba	61	44.595
ENSPLAG00000005628	rab42a	86	46.277	ENSPLAG00000023374	rab2a	88	46.277
ENSPLAG00000005628	rab42a	85	41.935	ENSPLAG00000014243	rab11ba	84	41.935
ENSPLAG00000005628	rab42a	83	32.967	ENSPLAG00000001529	rheb	93	32.967
ENSPLAG00000005628	rab42a	74	34.337	ENSPLAG00000002799	RAB7A	79	34.337
ENSPLAG00000005628	rab42a	76	42.424	ENSPLAG00000019136	rab18b	80	42.424
ENSPLAG00000005628	rab42a	69	33.775	ENSPLAG00000003379	hrasb	85	32.927
ENSPLAG00000005628	rab42a	72	38.509	ENSPLAG00000022926	rab9a	79	38.509
ENSPLAG00000005628	rab42a	79	42.442	ENSPLAG00000020989	rab35b	84	42.442
ENSPLAG00000005628	rab42a	82	43.258	ENSPLAG00000015592	-	87	43.258
ENSPLAG00000005628	rab42a	78	31.765	ENSPLAG00000016748	RHEB	87	31.765
ENSPLAG00000005628	rab42a	75	37.195	ENSPLAG00000016333	-	74	37.195
ENSPLAG00000005628	rab42a	75	34.756	ENSPLAG00000018718	rab22a	84	34.756
ENSPLAG00000005628	rab42a	75	38.415	ENSPLAG00000004790	rab5c	74	38.415
ENSPLAG00000005628	rab42a	100	54.128	ENSPLAG00000018322	-	100	54.128
ENSPLAG00000005628	rab42a	74	34.337	ENSPLAG00000001065	-	79	34.337
ENSPLAG00000005628	rab42a	75	31.928	ENSPLAG00000015685	rabl2	72	31.928
ENSPLAG00000005628	rab42a	69	34.437	ENSPLAG00000009352	KRAS	98	31.937
ENSPLAG00000005628	rab42a	83	41.111	ENSPLAG00000008004	rab25b	84	41.111
ENSPLAG00000005628	rab42a	77	42.857	ENSPLAG00000003558	rab25a	78	42.236
ENSPLAG00000005628	rab42a	85	41.398	ENSPLAG00000014207	-	84	41.398
ENSPLAG00000005628	rab42a	72	35.256	ENSPLAG00000011697	rab23	74	35.948
ENSPLAG00000005628	rab42a	75	34.756	ENSPLAG00000017232	rab22a	85	35.669
ENSPLAG00000005628	rab42a	77	31.737	ENSPLAG00000015650	rhebl1	88	31.737
ENSPLAG00000005628	rab42a	69	37.500	ENSPLAG00000011855	si:ch73-116o1.2	78	37.195
ENSPLAG00000005628	rab42a	75	40.237	ENSPLAG00000005189	rab33a	74	40.237
ENSPLAG00000005628	rab42a	79	43.023	ENSPLAG00000003181	-	85	43.023
ENSPLAG00000005628	rab42a	75	39.881	ENSPLAG00000006777	-	75	39.881
ENSPLAG00000005628	rab42a	79	43.023	ENSPLAG00000005832	RAB13	90	43.275
ENSPLAG00000005628	rab42a	98	37.788	ENSPLAG00000004551	-	97	37.788
ENSPLAG00000005628	rab42a	90	30.348	ENSPLAG00000022991	rab34a	71	30.348
ENSPLAG00000005628	rab42a	72	38.854	ENSPLAG00000019707	rab6bb	75	38.854
ENSPLAG00000005628	rab42a	72	39.490	ENSPLAG00000000376	rab41	73	39.490
ENSPLAG00000005628	rab42a	76	42.045	ENSPLAG00000016172	-	73	42.045
ENSPLAG00000005628	rab42a	98	37.383	ENSPLAG00000022515	-	97	37.383
ENSPLAG00000005628	rab42a	74	38.788	ENSPLAG00000011866	rab9b	73	38.788
ENSPLAG00000005628	rab42a	85	40.860	ENSPLAG00000011175	rab11a	86	40.860
ENSPLAG00000005628	rab42a	78	40.698	ENSPLAG00000013594	rab12	70	40.698
ENSPLAG00000005628	rab42a	67	43.243	ENSPLAG00000020627	zgc:101559	63	43.243
ENSPLAG00000005628	rab42a	77	41.667	ENSPLAG00000006354	rab15	78	41.667
ENSPLAG00000005628	rab42a	76	40.606	ENSPLAG00000023128	RAB15	78	40.606
ENSPLAG00000005628	rab42a	83	33.880	ENSPLAG00000005074	rab34b	71	33.880
ENSPLAG00000005628	rab42a	84	41.530	ENSPLAG00000007986	rab11al	84	41.530
ENSPLAG00000005628	rab42a	78	34.706	ENSPLAG00000009163	rras	85	34.706
ENSPLAG00000005628	rab42a	75	30.120	ENSPLAG00000006115	-	79	30.120
ENSPLAG00000005628	rab42a	79	45.349	ENSPLAG00000021043	si:dkey-16l2.16	81	45.349
ENSPLAG00000005628	rab42a	72	39.490	ENSPLAG00000019570	rab6a	75	39.490
ENSPLAG00000005628	rab42a	72	38.365	ENSPLAG00000019688	si:dkey-13a21.4	77	38.365
ENSPLAG00000005628	rab42a	76	37.059	ENSPLAG00000002600	RAB29	79	37.059
ENSPLAG00000005628	rab42a	73	45.000	ENSPLAG00000015383	rab30	78	45.000
ENSPLAG00000005628	rab42a	72	38.509	ENSPLAG00000007015	rab9a	75	38.509
ENSPLAG00000005628	rab42a	75	36.585	ENSPLAG00000017838	rab5aa	75	36.585
ENSPLAG00000005628	rab42a	84	39.674	ENSPLAG00000018655	rab1ba	91	39.674
ENSPLAG00000005628	rab42a	97	33.175	ENSPLAG00000022260	rab6ba	94	33.175
ENSPLAG00000005628	rab42a	100	39.450	ENSPLAG00000006520	rab1ab	100	39.450
ENSPLAG00000005628	rab42a	61	37.500	ENSPLAG00000019120	-	68	37.500
ENSPLAG00000005628	rab42a	88	35.938	ENSPLAG00000014563	rab4a	89	35.938
ENSPLAG00000005628	rab42a	78	44.444	ENSPLAG00000005869	zgc:171927	79	44.444
ENSPLAG00000005628	rab42a	86	60.000	ENSPLAG00000007773	si:dkey-34d22.5	86	60.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000005628	rab42a	100	94.495	ENSAPOG00000009188	rab42a	100	94.495	Acanthochromis_polyacanthus
ENSPLAG00000005628	rab42a	100	94.495	ENSACIG00000003102	rab42a	100	94.495	Amphilophus_citrinellus
ENSPLAG00000005628	rab42a	100	95.413	ENSAOCG00000012921	rab42a	83	95.413	Amphiprion_ocellaris
ENSPLAG00000005628	rab42a	100	95.413	ENSAPEG00000007713	rab42a	83	95.413	Amphiprion_percula
ENSPLAG00000005628	rab42a	100	92.661	ENSATEG00000009052	rab42a	100	92.661	Anabas_testudineus
ENSPLAG00000005628	rab42a	100	94.037	ENSACLG00000007514	rab42a	100	94.037	Astatotilapia_calliptera
ENSPLAG00000005628	rab42a	100	88.532	ENSAMXG00000032729	rab42a	100	88.532	Astyanax_mexicanus
ENSPLAG00000005628	rab42a	100	92.202	ENSCSEG00000010582	rab42a	100	92.202	Cynoglossus_semilaevis
ENSPLAG00000005628	rab42a	90	49.239	ENSDARG00000102580	CU571310.1	93	49.239	Danio_rerio
ENSPLAG00000005628	rab42a	100	89.908	ENSDARG00000034215	rab42a	100	89.908	Danio_rerio
ENSPLAG00000005628	rab42a	100	88.991	ENSELUG00000010345	rab42a	100	88.991	Esox_lucius
ENSPLAG00000005628	rab42a	100	97.706	ENSFHEG00000013106	rab42a	100	97.706	Fundulus_heteroclitus
ENSPLAG00000005628	rab42a	100	99.541	ENSGAFG00000002141	rab42a	100	99.541	Gambusia_affinis
ENSPLAG00000005628	rab42a	100	94.037	ENSHBUG00000015126	rab42a	82	94.037	Haplochromis_burtoni
ENSPLAG00000005628	rab42a	100	85.321	ENSIPUG00000011376	rab42a	100	85.321	Ictalurus_punctatus
ENSPLAG00000005628	rab42a	100	95.872	ENSKMAG00000007267	rab42a	100	95.872	Kryptolebias_marmoratus
ENSPLAG00000005628	rab42a	100	94.954	ENSLBEG00000001193	rab42a	100	94.954	Labrus_bergylta
ENSPLAG00000005628	rab42a	100	64.679	ENSLACG00000012755	-	100	64.679	Latimeria_chalumnae
ENSPLAG00000005628	rab42a	100	49.772	ENSLOCG00000015825	-	99	49.772	Lepisosteus_oculatus
ENSPLAG00000005628	rab42a	100	80.734	ENSLOCG00000003453	rab42a	100	80.734	Lepisosteus_oculatus
ENSPLAG00000005628	rab42a	100	95.413	ENSMAMG00000002296	rab42a	100	95.413	Mastacembelus_armatus
ENSPLAG00000005628	rab42a	100	94.037	ENSMZEG00005012460	rab42a	82	94.037	Maylandia_zebra
ENSPLAG00000005628	rab42a	100	91.284	ENSMMOG00000014358	rab42a	100	91.284	Mola_mola
ENSPLAG00000005628	rab42a	100	94.037	ENSNBRG00000021487	rab42a	82	94.037	Neolamprologus_brichardi
ENSPLAG00000005628	rab42a	100	94.954	ENSORLG00000022335	rab42a	100	94.954	Oryzias_latipes
ENSPLAG00000005628	rab42a	100	94.954	ENSORLG00020013895	rab42a	100	94.954	Oryzias_latipes_hni
ENSPLAG00000005628	rab42a	100	94.954	ENSORLG00015004273	rab42a	100	94.954	Oryzias_latipes_hsok
ENSPLAG00000005628	rab42a	100	94.954	ENSOMEG00000020418	rab42a	100	94.954	Oryzias_melastigma
ENSPLAG00000005628	rab42a	100	76.712	ENSPKIG00000021215	-	100	76.712	Paramormyrops_kingsleyae
ENSPLAG00000005628	rab42a	89	47.938	ENSPKIG00000015234	-	93	47.938	Paramormyrops_kingsleyae
ENSPLAG00000005628	rab42a	90	95.939	ENSPMGG00000024112	rab42a	90	95.939	Periophthalmus_magnuspinnatus
ENSPLAG00000005628	rab42a	100	99.541	ENSPFOG00000004838	rab42a	82	99.541	Poecilia_formosa
ENSPLAG00000005628	rab42a	100	99.541	ENSPMEG00000019497	rab42a	100	99.541	Poecilia_mexicana
ENSPLAG00000005628	rab42a	100	99.541	ENSPREG00000013962	rab42a	100	99.541	Poecilia_reticulata
ENSPLAG00000005628	rab42a	100	94.037	ENSPNYG00000010325	rab42a	82	94.037	Pundamilia_nyererei
ENSPLAG00000005628	rab42a	100	88.073	ENSPNAG00000016567	rab42a	100	88.073	Pygocentrus_nattereri
ENSPLAG00000005628	rab42a	100	83.486	ENSSFOG00015020732	rab42a	100	83.486	Scleropages_formosus
ENSPLAG00000005628	rab42a	100	45.662	ENSSFOG00015016000	-	97	45.662	Scleropages_formosus
ENSPLAG00000005628	rab42a	100	93.578	ENSSMAG00000020311	rab42a	100	93.578	Scophthalmus_maximus
ENSPLAG00000005628	rab42a	100	95.872	ENSSDUG00000011851	rab42a	100	95.872	Seriola_dumerili
ENSPLAG00000005628	rab42a	100	95.872	ENSSLDG00000020354	rab42a	100	95.872	Seriola_lalandi_dorsalis
ENSPLAG00000005628	rab42a	100	95.413	ENSSPAG00000016167	rab42a	100	95.413	Stegastes_partitus
ENSPLAG00000005628	rab42a	100	94.495	ENSTRUG00000010224	rab42a	100	94.495	Takifugu_rubripes
ENSPLAG00000005628	rab42a	100	99.083	ENSXCOG00000003428	rab42a	100	99.083	Xiphophorus_couchianus
ENSPLAG00000005628	rab42a	100	99.083	ENSXMAG00000028376	rab42a	100	99.083	Xiphophorus_maculatus