EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000005832 (Gene tree)
Gene ID: 106941250
Gene Symbol: RAB13
Alias: -
Full Name: ras-related protein Rab-13
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 4850 bases
Position: chrKQ548803.1:2004-6853
Accession: 106941250
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000021787	MMR_HSR1	PF01926.23	5.8e-05	1	1
ENSPLAP00000021789	MMR_HSR1	PF01926.23	7.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000010091	RAB13-202	937	XM_015024203	ENSPLAP00000021787	187 (aa)	XP_014879689	-
ENSPLAT00000010084	RAB13-201	642	-	ENSPLAP00000021789	213 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000005832's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000005832's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000005832	RAB13	91	50.000	ENSPLAG00000021043	si:dkey-16l2.16	81	50.000
ENSPLAG00000005832	RAB13	88	44.242	ENSPLAG00000004551	-	77	44.242
ENSPLAG00000005832	RAB13	94	55.429	ENSPLAG00000006354	rab15	82	55.429
ENSPLAG00000005832	RAB13	95	100.000	ENSPLAG00000003181	-	89	100.000
ENSPLAG00000005832	RAB13	91	39.674	ENSPLAG00000021278	rab33ba	75	39.674
ENSPLAG00000005832	RAB13	94	37.989	ENSPLAG00000002799	RAB7A	86	37.989
ENSPLAG00000005832	RAB13	86	42.236	ENSPLAG00000004790	rab5c	78	40.116
ENSPLAG00000005832	RAB13	90	56.805	ENSPLAG00000018655	rab1ba	88	53.889
ENSPLAG00000005832	RAB13	87	47.853	ENSPLAG00000019136	rab18b	79	47.853
ENSPLAG00000005832	RAB13	92	36.782	ENSPLAG00000009163	rras	88	36.782
ENSPLAG00000005832	RAB13	90	41.667	ENSPLAG00000005189	rab33a	80	41.667
ENSPLAG00000005832	RAB13	84	39.375	ENSPLAG00000022991	rab34a	57	39.375
ENSPLAG00000005832	RAB13	82	36.364	ENSPLAG00000015650	rhebl1	83	36.601
ENSPLAG00000005832	RAB13	87	46.626	ENSPLAG00000010104	rab18a	79	46.626
ENSPLAG00000005832	RAB13	85	42.683	ENSPLAG00000020627	zgc:101559	70	42.683
ENSPLAG00000005832	RAB13	84	44.304	ENSPLAG00000022260	rab6ba	76	44.304
ENSPLAG00000005832	RAB13	94	37.989	ENSPLAG00000001065	-	86	37.989
ENSPLAG00000005832	RAB13	90	43.275	ENSPLAG00000005628	rab42a	79	43.023
ENSPLAG00000005832	RAB13	91	45.349	ENSPLAG00000007237	RAB39B	81	45.349
ENSPLAG00000005832	RAB13	81	40.132	ENSPLAG00000011697	rab23	79	39.394
ENSPLAG00000005832	RAB13	86	33.140	ENSPLAG00000004043	rasl11a	67	33.140
ENSPLAG00000005832	RAB13	90	46.429	ENSPLAG00000007986	rab11al	78	46.429
ENSPLAG00000005832	RAB13	94	30.055	ENSPLAG00000008845	dnajc27	65	30.508
ENSPLAG00000005832	RAB13	84	44.304	ENSPLAG00000000376	rab41	75	44.304
ENSPLAG00000005832	RAB13	86	42.169	ENSPLAG00000018718	rab22a	83	39.752
ENSPLAG00000005832	RAB13	88	42.012	ENSPLAG00000007773	si:dkey-34d22.5	76	42.012
ENSPLAG00000005832	RAB13	90	36.095	ENSPLAG00000003379	hrasb	88	36.095
ENSPLAG00000005832	RAB13	91	36.872	ENSPLAG00000009352	KRAS	94	36.872
ENSPLAG00000005832	RAB13	89	40.230	ENSPLAG00000011866	rab9b	77	40.230
ENSPLAG00000005832	RAB13	90	45.029	ENSPLAG00000018322	-	81	44.767
ENSPLAG00000005832	RAB13	86	44.099	ENSPLAG00000003558	rab25a	77	44.311
ENSPLAG00000005832	RAB13	84	39.375	ENSPLAG00000005074	rab34b	63	39.375
ENSPLAG00000005832	RAB13	96	43.889	ENSPLAG00000014563	rab4a	81	45.349
ENSPLAG00000005832	RAB13	83	40.000	ENSPLAG00000022926	rab9a	81	40.000
ENSPLAG00000005832	RAB13	87	41.071	ENSPLAG00000006777	-	75	41.071
ENSPLAG00000005832	RAB13	90	43.195	ENSPLAG00000017838	rab5aa	78	43.195
ENSPLAG00000005832	RAB13	83	40.000	ENSPLAG00000007015	rab9a	77	40.000
ENSPLAG00000005832	RAB13	93	44.253	ENSPLAG00000008004	rab25b	82	44.253
ENSPLAG00000005832	RAB13	94	31.551	ENSPLAG00000002398	rasl11b	76	31.551
ENSPLAG00000005832	RAB13	88	44.848	ENSPLAG00000022515	-	77	44.848
ENSPLAG00000005832	RAB13	85	49.057	ENSPLAG00000014243	rab11ba	74	48.447
ENSPLAG00000005832	RAB13	84	44.937	ENSPLAG00000019707	rab6bb	76	44.937
ENSPLAG00000005832	RAB13	90	57.988	ENSPLAG00000015592	-	89	54.645
ENSPLAG00000005832	RAB13	88	35.714	ENSPLAG00000019688	si:dkey-13a21.4	82	35.714
ENSPLAG00000005832	RAB13	86	42.857	ENSPLAG00000016333	-	74	42.857
ENSPLAG00000005832	RAB13	82	36.364	ENSPLAG00000001529	rheb	84	36.364
ENSPLAG00000005832	RAB13	92	33.714	ENSPLAG00000015685	rabl2	78	33.714
ENSPLAG00000005832	RAB13	94	46.023	ENSPLAG00000001598	rab11bb	81	46.023
ENSPLAG00000005832	RAB13	83	33.544	ENSPLAG00000006115	-	75	33.544
ENSPLAG00000005832	RAB13	91	55.882	ENSPLAG00000023128	RAB15	81	55.882
ENSPLAG00000005832	RAB13	91	51.163	ENSPLAG00000013594	rab12	70	51.163
ENSPLAG00000005832	RAB13	91	35.393	ENSPLAG00000002600	RAB29	79	36.095
ENSPLAG00000005832	RAB13	90	48.214	ENSPLAG00000023374	rab2a	79	48.214
ENSPLAG00000005832	RAB13	91	54.386	ENSPLAG00000020989	rab35b	84	54.386
ENSPLAG00000005832	RAB13	79	33.557	ENSPLAG00000019120	-	75	33.784
ENSPLAG00000005832	RAB13	84	44.937	ENSPLAG00000019570	rab6a	76	44.937
ENSPLAG00000005832	RAB13	89	48.193	ENSPLAG00000011175	rab11a	76	49.686
ENSPLAG00000005832	RAB13	94	46.023	ENSPLAG00000014207	-	81	46.023
ENSPLAG00000005832	RAB13	86	37.423	ENSPLAG00000011855	si:ch73-116o1.2	78	37.423
ENSPLAG00000005832	RAB13	90	57.988	ENSPLAG00000006520	rab1ab	89	54.645
ENSPLAG00000005832	RAB13	86	33.750	ENSPLAG00000016748	RHEB	83	33.750
ENSPLAG00000005832	RAB13	90	56.805	ENSPLAG00000005869	zgc:171927	79	56.805
ENSPLAG00000005832	RAB13	91	49.123	ENSPLAG00000015383	rab30	84	49.123
ENSPLAG00000005832	RAB13	95	36.517	ENSPLAG00000017232	rab22a	87	39.873
ENSPLAG00000005832	RAB13	64	30.579	ENSPLAG00000001962	arl3	63	30.769
ENSPLAG00000005832	RAB13	78	45.695	ENSPLAG00000016172	-	63	45.695

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000005832	RAB13	93	83.815	ENSG00000143545	RAB13	95	74.112	Homo_sapiens
ENSPLAG00000005832	RAB13	95	95.506	ENSACIG00000008584	rab13	86	95.506	Amphilophus_citrinellus
ENSPLAG00000005832	RAB13	93	84.393	ENSANAG00000030247	-	95	74.619	Aotus_nancymaae
ENSPLAG00000005832	RAB13	95	94.350	ENSAMXG00000030712	rab13	88	94.350	Astyanax_mexicanus
ENSPLAG00000005832	RAB13	93	83.815	ENSBTAG00000017604	RAB13	95	74.112	Bos_taurus
ENSPLAG00000005832	RAB13	86	48.148	WBGene00019317	K02E10.1	79	46.591	Caenorhabditis_elegans
ENSPLAG00000005832	RAB13	93	83.815	ENSCJAG00000009933	-	95	74.112	Callithrix_jacchus
ENSPLAG00000005832	RAB13	93	83.815	ENSCHIG00000022271	-	95	74.112	Capra_hircus
ENSPLAG00000005832	RAB13	93	83.815	ENSCPOG00000011491	-	85	83.815	Cavia_porcellus
ENSPLAG00000005832	RAB13	93	83.815	ENSCCAG00000028502	-	95	74.112	Cebus_capucinus
ENSPLAG00000005832	RAB13	93	83.815	ENSCATG00000041779	-	95	74.112	Cercocebus_atys
ENSPLAG00000005832	RAB13	95	81.461	ENSCLAG00000006603	-	88	81.461	Chinchilla_lanigera
ENSPLAG00000005832	RAB13	93	83.815	ENSCANG00000036573	-	95	74.112	Colobus_angolensis_palliatus
ENSPLAG00000005832	RAB13	93	83.815	ENSCGRG00001021505	Rab13	94	74.872	Cricetulus_griseus_chok1gshd
ENSPLAG00000005832	RAB13	93	83.815	ENSCGRG00000012126	Rab13	94	74.872	Cricetulus_griseus_crigri
ENSPLAG00000005832	RAB13	99	90.860	ENSCSEG00000002358	rab13	89	94.350	Cynoglossus_semilaevis
ENSPLAG00000005832	RAB13	95	94.350	ENSDARG00000034771	rab13	89	94.350	Danio_rerio
ENSPLAG00000005832	RAB13	93	84.971	ENSDORG00000001591	Rab13	85	84.971	Dipodomys_ordii
ENSPLAG00000005832	RAB13	93	83.815	ENSEASG00005000683	-	85	83.815	Equus_asinus_asinus
ENSPLAG00000005832	RAB13	93	83.815	ENSECAG00000016551	RAB13	85	83.815	Equus_caballus
ENSPLAG00000005832	RAB13	93	80.347	ENSEEUG00000001233	-	94	73.333	Erinaceus_europaeus
ENSPLAG00000005832	RAB13	95	92.090	ENSELUG00000012801	rab13	89	92.090	Esox_lucius
ENSPLAG00000005832	RAB13	93	82.659	ENSFCAG00000045269	-	85	82.659	Felis_catus
ENSPLAG00000005832	RAB13	71	86.364	ENSFDAG00000014469	-	100	86.364	Fukomys_damarensis
ENSPLAG00000005832	RAB13	96	97.207	ENSFHEG00000021221	rab13	98	97.207	Fundulus_heteroclitus
ENSPLAG00000005832	RAB13	95	93.785	ENSGACG00000011925	rab13	88	93.785	Gasterosteus_aculeatus
ENSPLAG00000005832	RAB13	94	84.091	ENSGAGG00000000742	-	88	84.091	Gopherus_agassizii
ENSPLAG00000005832	RAB13	93	83.815	ENSGGOG00000023693	RAB13	95	74.112	Gorilla_gorilla
ENSPLAG00000005832	RAB13	95	80.337	ENSHGLG00000008749	RAB13	88	80.337	Heterocephalus_glaber_female
ENSPLAG00000005832	RAB13	95	80.337	ENSHGLG00100013608	RAB13	88	80.337	Heterocephalus_glaber_male
ENSPLAG00000005832	RAB13	97	93.407	ENSHCOG00000007440	rab13	99	94.444	Hippocampus_comes
ENSPLAG00000005832	RAB13	95	94.350	ENSIPUG00000003199	rab13	88	94.350	Ictalurus_punctatus
ENSPLAG00000005832	RAB13	93	84.971	ENSSTOG00000011222	-	95	75.635	Ictidomys_tridecemlineatus
ENSPLAG00000005832	RAB13	95	82.022	ENSJJAG00000010575	Rab13	88	82.022	Jaculus_jaculus
ENSPLAG00000005832	RAB13	95	94.915	ENSKMAG00000001908	rab13	90	94.083	Kryptolebias_marmoratus
ENSPLAG00000005832	RAB13	95	96.045	ENSLBEG00000026779	rab13	89	96.045	Labrus_bergylta
ENSPLAG00000005832	RAB13	95	78.652	ENSLACG00000008103	-	100	78.652	Latimeria_chalumnae
ENSPLAG00000005832	RAB13	93	83.815	ENSMFAG00000041018	RAB13	95	74.112	Macaca_fascicularis
ENSPLAG00000005832	RAB13	93	83.815	ENSMNEG00000028951	-	95	74.112	Macaca_nemestrina
ENSPLAG00000005832	RAB13	93	83.815	ENSMLEG00000042247	-	95	74.112	Mandrillus_leucophaeus
ENSPLAG00000005832	RAB13	95	97.753	ENSMAMG00000014602	rab13	89	97.740	Mastacembelus_armatus
ENSPLAG00000005832	RAB13	93	84.393	ENSMAUG00000015713	Rab13	85	84.393	Mesocricetus_auratus
ENSPLAG00000005832	RAB13	94	83.429	ENSMICG00000010340	-	86	83.815	Microcebus_murinus
ENSPLAG00000005832	RAB13	93	84.393	ENSMOCG00000021448	Rab13	85	84.393	Microtus_ochrogaster
ENSPLAG00000005832	RAB13	94	83.523	ENSMODG00000017295	-	74	83.523	Monodelphis_domestica
ENSPLAG00000005832	RAB13	93	82.081	MGP_CAROLIEiJ_G0025227	Rab13	85	82.081	Mus_caroli
ENSPLAG00000005832	RAB13	93	82.081	ENSMUSG00000027935	Rab13	86	82.081	Mus_musculus
ENSPLAG00000005832	RAB13	96	77.540	MGP_PahariEiJ_G0026671	Rab13	93	77.540	Mus_pahari
ENSPLAG00000005832	RAB13	93	83.237	ENSNGAG00000010309	Rab13	86	83.237	Nannospalax_galili
ENSPLAG00000005832	RAB13	95	96.067	ENSNBRG00000004124	rab13	89	96.045	Neolamprologus_brichardi
ENSPLAG00000005832	RAB13	96	81.667	ENSNLEG00000028944	-	91	81.667	Nomascus_leucogenys
ENSPLAG00000005832	RAB13	95	82.486	ENSMEUG00000009667	-	87	82.486	Notamacropus_eugenii
ENSPLAG00000005832	RAB13	68	86.614	ENSODEG00000012634	-	100	86.614	Octodon_degus
ENSPLAG00000005832	RAB13	93	82.659	ENSODEG00000010443	-	85	82.659	Octodon_degus
ENSPLAG00000005832	RAB13	95	96.629	ENSONIG00000006340	rab13	88	96.629	Oreochromis_niloticus
ENSPLAG00000005832	RAB13	93	83.815	ENSOCUG00000006286	-	97	83.815	Oryctolagus_cuniculus
ENSPLAG00000005832	RAB13	95	96.067	ENSOMEG00000008210	rab13	89	96.045	Oryzias_melastigma
ENSPLAG00000005832	RAB13	93	82.659	ENSOGAG00000016969	-	86	82.659	Otolemur_garnettii
ENSPLAG00000005832	RAB13	93	83.815	ENSPPAG00000028435	-	95	74.112	Pan_paniscus
ENSPLAG00000005832	RAB13	93	82.659	ENSPPRG00000008865	-	85	82.659	Panthera_pardus
ENSPLAG00000005832	RAB13	93	83.815	ENSPTRG00000001370	RAB13	95	74.112	Pan_troglodytes
ENSPLAG00000005832	RAB13	93	83.815	ENSPANG00000004479	-	95	74.112	Papio_anubis
ENSPLAG00000005832	RAB13	96	92.778	ENSPMGG00000007680	rab13	88	93.750	Periophthalmus_magnuspinnatus
ENSPLAG00000005832	RAB13	61	86.957	ENSPEMG00000017353	-	86	86.957	Peromyscus_maniculatus_bairdii
ENSPLAG00000005832	RAB13	95	82.486	ENSPCIG00000029350	-	87	82.486	Phascolarctos_cinereus
ENSPLAG00000005832	RAB13	95	100.000	ENSPREG00000017567	rab13	89	100.000	Poecilia_reticulata
ENSPLAG00000005832	RAB13	93	83.815	ENSPPYG00000000790	-	95	74.112	Pongo_abelii
ENSPLAG00000005832	RAB13	93	84.393	ENSPCOG00000012189	-	86	84.393	Propithecus_coquereli
ENSPLAG00000005832	RAB13	93	82.659	ENSPVAG00000011095	-	86	82.659	Pteropus_vampyrus
ENSPLAG00000005832	RAB13	99	93.514	ENSPNAG00000004189	rab13	97	93.514	Pygocentrus_nattereri
ENSPLAG00000005832	RAB13	93	82.659	ENSRNOG00000016733	Rab13	94	73.980	Rattus_norvegicus
ENSPLAG00000005832	RAB13	93	83.815	ENSRBIG00000008552	-	95	74.112	Rhinopithecus_bieti
ENSPLAG00000005832	RAB13	93	83.815	ENSRROG00000036885	-	95	74.112	Rhinopithecus_roxellana
ENSPLAG00000005832	RAB13	93	83.815	ENSSBOG00000020342	-	86	83.815	Saimiri_boliviensis_boliviensis
ENSPLAG00000005832	RAB13	95	83.051	ENSSHAG00000011866	-	87	83.051	Sarcophilus_harrisii
ENSPLAG00000005832	RAB13	93	83.815	ENSSSCG00000006564	-	95	74.112	Sus_scrofa
ENSPLAG00000005832	RAB13	95	94.915	ENSTRUG00000024177	rab13	89	94.915	Takifugu_rubripes
ENSPLAG00000005832	RAB13	93	84.393	ENSTBEG00000012734	-	85	84.393	Tupaia_belangeri
ENSPLAG00000005832	RAB13	93	83.815	ENSTTRG00000011183	-	95	74.112	Tursiops_truncatus
ENSPLAG00000005832	RAB13	72	79.259	ENSXETG00000020729	rab13	84	79.259	Xenopus_tropicalis
ENSPLAG00000005832	RAB13	98	97.283	ENSXCOG00000019533	rab13	98	97.283	Xiphophorus_couchianus