EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000005836 (Gene tree)
Gene ID: 106951060
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 668-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 6979 bases
Position: chrKQ545752.1:319045-326023
Accession: 106951060
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000021802	zf-C2H2	PF00096.26	1.2e-19	1	3
ENSPLAP00000021802	zf-C2H2	PF00096.26	1.2e-19	2	3
ENSPLAP00000021802	zf-C2H2	PF00096.26	1.2e-19	3	3
ENSPLAP00000004203	zf-C2H2	PF00096.26	1.7e-19	1	3
ENSPLAP00000004203	zf-C2H2	PF00096.26	1.7e-19	2	3
ENSPLAP00000004203	zf-C2H2	PF00096.26	1.7e-19	3	3
ENSPLAP00000021802	zf-met	PF12874.7	2.5e-07	1	1
ENSPLAP00000004203	zf-met	PF12874.7	3.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000010046	-	2943	XM_015038328	ENSPLAP00000021802	730 (aa)	XP_014893814	UPI00072DA66F
ENSPLAT00000010042	-	3495	-	ENSPLAP00000004203	749 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000005836's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000005836's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000005836	-	53	30.275	ENSPLAG00000002838	-	94	30.460
ENSPLAG00000005836	-	53	41.509	ENSPLAG00000022610	-	67	41.509
ENSPLAG00000005836	-	55	33.036	ENSPLAG00000004443	-	54	33.036
ENSPLAG00000005836	-	58	34.337	ENSPLAG00000011798	-	86	34.337
ENSPLAG00000005836	-	51	31.429	ENSPLAG00000014105	-	89	31.429
ENSPLAG00000005836	-	52	33.728	ENSPLAG00000021634	-	95	33.728
ENSPLAG00000005836	-	58	34.337	ENSPLAG00000021050	-	86	34.337
ENSPLAG00000005836	-	56	33.582	ENSPLAG00000018156	-	93	31.282
ENSPLAG00000005836	-	53	31.776	ENSPLAG00000016609	-	93	32.124
ENSPLAG00000005836	-	58	32.759	ENSPLAG00000021218	-	78	32.759
ENSPLAG00000005836	-	53	32.663	ENSPLAG00000023074	-	81	32.663
ENSPLAG00000005836	-	51	33.051	ENSPLAG00000019775	-	95	33.051
ENSPLAG00000005836	-	50	32.584	ENSPLAG00000008610	-	64	32.584
ENSPLAG00000005836	-	62	47.273	ENSPLAG00000010431	-	67	47.273
ENSPLAG00000005836	-	51	31.061	ENSPLAG00000023502	-	68	31.061
ENSPLAG00000005836	-	52	35.714	ENSPLAG00000015992	-	95	35.714
ENSPLAG00000005836	-	51	30.075	ENSPLAG00000010211	-	94	30.075
ENSPLAG00000005836	-	55	35.714	ENSPLAG00000000385	-	86	32.584
ENSPLAG00000005836	-	57	30.199	ENSPLAG00000018468	-	78	30.114
ENSPLAG00000005836	-	55	33.333	ENSPLAG00000004503	-	84	31.973
ENSPLAG00000005836	-	50	32.727	ENSPLAG00000016013	-	90	32.727
ENSPLAG00000005836	-	51	32.468	ENSPLAG00000015587	-	89	30.503
ENSPLAG00000005836	-	53	35.714	ENSPLAG00000010234	-	91	35.556
ENSPLAG00000005836	-	55	31.073	ENSPLAG00000008529	-	99	32.727
ENSPLAG00000005836	-	51	34.579	ENSPLAG00000021074	-	71	30.333
ENSPLAG00000005836	-	53	30.189	ENSPLAG00000006174	-	70	30.675
ENSPLAG00000005836	-	56	32.727	ENSPLAG00000014660	-	80	39.062
ENSPLAG00000005836	-	50	30.909	ENSPLAG00000016561	zgc:113348	81	31.214

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000005836	-	61	30.455	ENSAPOG00000005259	-	65	31.416	Acanthochromis_polyacanthus
ENSPLAG00000005836	-	62	32.184	ENSAPEG00000012217	-	66	32.184	Amphiprion_percula
ENSPLAG00000005836	-	50	35.714	ENSAPEG00000013550	-	94	32.164	Amphiprion_percula
ENSPLAG00000005836	-	52	30.000	ENSCVAG00000002500	-	97	30.000	Cyprinodon_variegatus
ENSPLAG00000005836	-	50	33.333	ENSEBUG00000015456	-	89	33.333	Eptatretus_burgeri
ENSPLAG00000005836	-	51	45.283	ENSEBUG00000006233	-	57	45.283	Eptatretus_burgeri
ENSPLAG00000005836	-	53	30.556	ENSFHEG00000021003	-	66	30.556	Fundulus_heteroclitus
ENSPLAG00000005836	-	57	37.037	ENSFHEG00000005983	-	61	37.037	Fundulus_heteroclitus
ENSPLAG00000005836	-	52	41.509	ENSFHEG00000005993	-	73	41.509	Fundulus_heteroclitus
ENSPLAG00000005836	-	51	36.585	ENSGAFG00000011999	-	77	36.585	Gambusia_affinis
ENSPLAG00000005836	-	61	33.161	ENSLACG00000017381	-	97	33.889	Latimeria_chalumnae
ENSPLAG00000005836	-	52	33.750	ENSORLG00000022699	-	86	30.573	Oryzias_latipes
ENSPLAG00000005836	-	53	36.471	ENSORLG00000029027	-	85	30.818	Oryzias_latipes
ENSPLAG00000005836	-	51	30.141	ENSORLG00000027822	-	90	30.000	Oryzias_latipes
ENSPLAG00000005836	-	51	34.078	ENSORLG00000027186	-	82	34.078	Oryzias_latipes
ENSPLAG00000005836	-	50	32.653	ENSORLG00020010804	-	93	32.022	Oryzias_latipes_hni
ENSPLAG00000005836	-	58	36.364	ENSORLG00020017164	-	99	30.514	Oryzias_latipes_hni
ENSPLAG00000005836	-	57	31.214	ENSORLG00020010560	-	87	33.673	Oryzias_latipes_hni
ENSPLAG00000005836	-	54	31.429	ENSORLG00015011730	-	76	31.429	Oryzias_latipes_hsok
ENSPLAG00000005836	-	58	41.250	ENSORLG00015007742	-	95	41.250	Oryzias_latipes_hsok
ENSPLAG00000005836	-	50	30.169	ENSORLG00015012339	-	93	33.083	Oryzias_latipes_hsok
ENSPLAG00000005836	-	50	32.911	ENSORLG00015012776	-	96	38.144	Oryzias_latipes_hsok
ENSPLAG00000005836	-	55	40.741	ENSOMEG00000019519	-	77	33.533	Oryzias_melastigma
ENSPLAG00000005836	-	50	35.484	ENSOMEG00000009568	-	100	38.298	Oryzias_melastigma
ENSPLAG00000005836	-	60	32.967	ENSOMEG00000010371	-	96	39.024	Oryzias_melastigma
ENSPLAG00000005836	-	50	36.471	ENSOMEG00000015103	-	88	36.471	Oryzias_melastigma
ENSPLAG00000005836	-	59	35.256	ENSOMEG00000013677	-	73	41.250	Oryzias_melastigma
ENSPLAG00000005836	-	50	30.588	ENSOMEG00000016295	-	73	30.588	Oryzias_melastigma
ENSPLAG00000005836	-	50	30.363	ENSOMEG00000021017	-	78	30.363	Oryzias_melastigma
ENSPLAG00000005836	-	62	37.113	ENSOMEG00000011566	-	85	34.091	Oryzias_melastigma
ENSPLAG00000005836	-	57	30.702	ENSOMEG00000019336	-	93	30.702	Oryzias_melastigma
ENSPLAG00000005836	-	56	36.752	ENSOMEG00000008449	-	98	36.434	Oryzias_melastigma
ENSPLAG00000005836	-	56	32.335	ENSOMEG00000006511	-	69	32.317	Oryzias_melastigma
ENSPLAG00000005836	-	53	30.601	ENSPMAG00000000401	-	89	31.481	Petromyzon_marinus
ENSPLAG00000005836	-	67	96.032	ENSPFOG00000024288	-	96	96.032	Poecilia_formosa
ENSPLAG00000005836	-	50	34.615	ENSPFOG00000021869	-	72	34.615	Poecilia_formosa
ENSPLAG00000005836	-	53	34.091	ENSPMEG00000020833	-	76	31.818	Poecilia_mexicana
ENSPLAG00000005836	-	100	97.397	ENSPMEG00000020939	-	100	97.397	Poecilia_mexicana
ENSPLAG00000005836	-	50	35.185	ENSPREG00000014366	-	95	35.185	Poecilia_reticulata
ENSPLAG00000005836	-	50	30.072	ENSPREG00000013780	-	90	33.333	Poecilia_reticulata
ENSPLAG00000005836	-	54	31.977	ENSSFOG00015021831	-	88	31.977	Scleropages_formosus
ENSPLAG00000005836	-	51	46.296	ENSXCOG00000012458	-	60	46.296	Xiphophorus_couchianus