EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000005849 (Gene tree)
Gene ID: 106951059
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 787-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 3818 bases
Position: chrKQ545752.1:312631-316448
Accession: 106951059
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000004208	zf-C2H2	PF00096.26	2.1e-28	1	3
ENSPLAP00000004208	zf-C2H2	PF00096.26	2.1e-28	2	3
ENSPLAP00000004208	zf-C2H2	PF00096.26	2.1e-28	3	3
ENSPLAP00000004208	zf-met	PF12874.7	6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000010027	-	2312	XM_015038325	ENSPLAP00000004208	416 (aa)	XP_014893811	-

Gene Model

Click here to download ENSPLAG00000005849's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000005849's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000005849	-	81	30.075	ENSPLAG00000015587	-	87	30.075

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000005849	-	98	61.779	ENSAMXG00000038507	-	99	61.779	Astyanax_mexicanus
ENSPLAG00000005849	-	72	40.397	ENSCSEG00000012798	-	88	39.869	Cynoglossus_semilaevis
ENSPLAG00000005849	-	96	61.765	ENSELUG00000020907	-	99	57.952	Esox_lucius
ENSPLAG00000005849	-	97	46.715	ENSELUG00000009258	-	97	46.715	Esox_lucius
ENSPLAG00000005849	-	100	83.453	ENSFHEG00000005807	-	100	83.213	Fundulus_heteroclitus
ENSPLAG00000005849	-	100	96.890	ENSGAFG00000003348	-	100	96.890	Gambusia_affinis
ENSPLAG00000005849	-	97	62.103	ENSIPUG00000002513	-	98	62.347	Ictalurus_punctatus
ENSPLAG00000005849	-	98	80.097	ENSKMAG00000014028	-	92	79.126	Kryptolebias_marmoratus
ENSPLAG00000005849	-	98	77.053	ENSMMOG00000009859	-	99	76.570	Mola_mola
ENSPLAG00000005849	-	98	79.952	ENSORLG00000023072	-	99	78.986	Oryzias_latipes
ENSPLAG00000005849	-	98	80.145	ENSORLG00020002684	-	99	79.177	Oryzias_latipes_hni
ENSPLAG00000005849	-	98	80.145	ENSORLG00015018897	-	99	79.177	Oryzias_latipes_hsok
ENSPLAG00000005849	-	98	80.630	ENSOMEG00000010520	-	94	79.661	Oryzias_melastigma
ENSPLAG00000005849	-	100	99.041	ENSPMEG00000020957	-	100	99.041	Poecilia_mexicana
ENSPLAG00000005849	-	100	98.086	ENSPREG00000007939	-	100	98.086	Poecilia_reticulata
ENSPLAG00000005849	-	98	61.962	ENSPNAG00000003839	-	99	62.440	Pygocentrus_nattereri
ENSPLAG00000005849	-	97	58.134	ENSSFOG00015019679	-	98	58.554	Scleropages_formosus
ENSPLAG00000005849	-	100	97.136	ENSXCOG00000015432	-	100	97.136	Xiphophorus_couchianus
ENSPLAG00000005849	-	100	96.897	ENSXMAG00000029995	-	90	96.897	Xiphophorus_maculatus