EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000005869 (Gene tree)
Gene ID: 106963163
Gene Symbol: zgc:171927
Alias: -
Full Name: ras-related protein Rab-1B-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 4504 bases
Position: chrKQ546813.1:14259-18762
Accession: 106963163
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000004224	MMR_HSR1	PF01926.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000010001	-	645	XM_015057921	ENSPLAP00000004224	214 (aa)	XP_014913407	UPI00072E02D1

Gene Model

Click here to download ENSPLAG00000005869's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000005869's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000005869	zgc:171927	79	41.040	ENSPLAG00000007773	si:dkey-34d22.5	78	41.040
ENSPLAG00000005869	zgc:171927	83	36.313	ENSPLAG00000003379	hrasb	88	36.686
ENSPLAG00000005869	zgc:171927	77	38.788	ENSPLAG00000009352	KRAS	91	38.150
ENSPLAG00000005869	zgc:171927	73	37.888	ENSPLAG00000011866	rab9b	73	37.888
ENSPLAG00000005869	zgc:171927	83	44.134	ENSPLAG00000018322	-	84	44.134
ENSPLAG00000005869	zgc:171927	76	48.466	ENSPLAG00000023128	RAB15	78	48.466
ENSPLAG00000005869	zgc:171927	98	42.254	ENSPLAG00000003558	rab25a	94	42.254
ENSPLAG00000005869	zgc:171927	73	36.709	ENSPLAG00000011697	rab23	87	34.831
ENSPLAG00000005869	zgc:171927	72	37.736	ENSPLAG00000006777	-	72	37.736
ENSPLAG00000005869	zgc:171927	97	34.112	ENSPLAG00000022926	rab9a	97	34.112
ENSPLAG00000005869	zgc:171927	98	40.952	ENSPLAG00000008004	rab25b	95	40.952
ENSPLAG00000005869	zgc:171927	79	56.805	ENSPLAG00000005832	RAB13	90	56.805
ENSPLAG00000005869	zgc:171927	55	30.252	ENSPLAG00000007735	arl4cb	61	30.252
ENSPLAG00000005869	zgc:171927	100	71.495	ENSPLAG00000018655	rab1ba	100	71.495
ENSPLAG00000005869	zgc:171927	72	51.613	ENSPLAG00000019136	rab18b	75	51.613
ENSPLAG00000005869	zgc:171927	86	41.379	ENSPLAG00000022515	-	94	41.379
ENSPLAG00000005869	zgc:171927	79	51.786	ENSPLAG00000014243	rab11ba	77	51.786
ENSPLAG00000005869	zgc:171927	75	39.752	ENSPLAG00000019707	rab6bb	77	39.752
ENSPLAG00000005869	zgc:171927	92	75.127	ENSPLAG00000015592	-	98	75.127
ENSPLAG00000005869	zgc:171927	76	34.146	ENSPLAG00000001529	rheb	89	34.146
ENSPLAG00000005869	zgc:171927	77	39.053	ENSPLAG00000001065	-	82	39.053
ENSPLAG00000005869	zgc:171927	85	45.055	ENSPLAG00000017838	rab5aa	82	45.055
ENSPLAG00000005869	zgc:171927	81	43.103	ENSPLAG00000016333	-	80	43.103
ENSPLAG00000005869	zgc:171927	72	52.903	ENSPLAG00000010104	rab18a	75	52.903
ENSPLAG00000005869	zgc:171927	73	36.478	ENSPLAG00000015685	rabl2	69	36.478
ENSPLAG00000005869	zgc:171927	55	31.356	ENSPLAG00000004167	arl8a	61	31.356
ENSPLAG00000005869	zgc:171927	99	43.602	ENSPLAG00000001598	rab11bb	96	43.602
ENSPLAG00000005869	zgc:171927	79	49.704	ENSPLAG00000006354	rab15	79	49.704
ENSPLAG00000005869	zgc:171927	55	31.405	ENSPLAG00000020975	arl8ba	61	31.405
ENSPLAG00000005869	zgc:171927	55	30.833	ENSPLAG00000017420	arl4aa	59	30.833
ENSPLAG00000005869	zgc:171927	96	46.117	ENSPLAG00000011175	rab11a	95	46.117
ENSPLAG00000005869	zgc:171927	80	45.930	ENSPLAG00000013594	rab12	70	45.930
ENSPLAG00000005869	zgc:171927	76	34.911	ENSPLAG00000002600	RAB29	79	34.911
ENSPLAG00000005869	zgc:171927	79	31.361	ENSPLAG00000016748	RHEB	87	31.361
ENSPLAG00000005869	zgc:171927	79	49.704	ENSPLAG00000023374	rab2a	80	49.704
ENSPLAG00000005869	zgc:171927	76	65.432	ENSPLAG00000020989	rab35b	80	65.432
ENSPLAG00000005869	zgc:171927	79	51.190	ENSPLAG00000014207	-	77	51.190
ENSPLAG00000005869	zgc:171927	83	30.337	ENSPLAG00000019120	-	87	30.337
ENSPLAG00000005869	zgc:171927	81	45.087	ENSPLAG00000014563	rab4a	81	45.087
ENSPLAG00000005869	zgc:171927	91	36.946	ENSPLAG00000019570	rab6a	92	36.946
ENSPLAG00000005869	zgc:171927	72	38.462	ENSPLAG00000011855	si:ch73-116o1.2	75	38.462
ENSPLAG00000005869	zgc:171927	79	38.202	ENSPLAG00000005074	rab34b	70	38.202
ENSPLAG00000005869	zgc:171927	92	77.000	ENSPLAG00000006520	rab1ab	99	77.000
ENSPLAG00000005869	zgc:171927	77	41.212	ENSPLAG00000017232	rab22a	87	40.506
ENSPLAG00000005869	zgc:171927	83	44.693	ENSPLAG00000007237	RAB39B	84	44.693
ENSPLAG00000005869	zgc:171927	99	46.445	ENSPLAG00000015383	rab30	97	46.445
ENSPLAG00000005869	zgc:171927	68	44.371	ENSPLAG00000016172	-	63	44.371
ENSPLAG00000005869	zgc:171927	76	63.580	ENSPLAG00000021043	si:dkey-16l2.16	77	63.580
ENSPLAG00000005869	zgc:171927	79	44.970	ENSPLAG00000004551	-	79	44.970
ENSPLAG00000005869	zgc:171927	92	51.777	ENSPLAG00000003181	-	95	51.777
ENSPLAG00000005869	zgc:171927	79	41.758	ENSPLAG00000021278	rab33ba	75	41.758
ENSPLAG00000005869	zgc:171927	74	39.877	ENSPLAG00000002799	RAB7A	79	39.877
ENSPLAG00000005869	zgc:171927	76	45.399	ENSPLAG00000004790	rab5c	85	43.684
ENSPLAG00000005869	zgc:171927	88	34.921	ENSPLAG00000009163	rras	92	34.921
ENSPLAG00000005869	zgc:171927	88	39.286	ENSPLAG00000005189	rab33a	87	39.286
ENSPLAG00000005869	zgc:171927	99	43.602	ENSPLAG00000007986	rab11al	96	43.602
ENSPLAG00000005869	zgc:171927	57	32.000	ENSPLAG00000019168	arl4d	61	32.000
ENSPLAG00000005869	zgc:171927	96	35.211	ENSPLAG00000022991	rab34a	73	35.211
ENSPLAG00000005869	zgc:171927	91	30.097	ENSPLAG00000002398	rasl11b	81	30.097
ENSPLAG00000005869	zgc:171927	76	33.129	ENSPLAG00000015650	rhebl1	88	33.129
ENSPLAG00000005869	zgc:171927	80	44.262	ENSPLAG00000020627	zgc:101559	78	44.262
ENSPLAG00000005869	zgc:171927	99	33.790	ENSPLAG00000007015	rab9a	94	33.790
ENSPLAG00000005869	zgc:171927	96	34.951	ENSPLAG00000022260	rab6ba	93	34.951
ENSPLAG00000005869	zgc:171927	79	44.444	ENSPLAG00000005628	rab42a	78	44.444
ENSPLAG00000005869	zgc:171927	61	30.370	ENSPLAG00000012381	arl2	70	30.370
ENSPLAG00000005869	zgc:171927	83	32.308	ENSPLAG00000004043	rasl11a	75	32.308
ENSPLAG00000005869	zgc:171927	87	38.298	ENSPLAG00000000376	rab41	84	38.298
ENSPLAG00000005869	zgc:171927	80	36.517	ENSPLAG00000019688	si:dkey-13a21.4	87	36.517
ENSPLAG00000005869	zgc:171927	77	41.212	ENSPLAG00000018718	rab22a	83	41.212

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000005869	zgc:171927	100	92.523	ENSAPOG00000004980	-	100	92.523	Acanthochromis_polyacanthus
ENSPLAG00000005869	zgc:171927	100	92.056	ENSACIG00000009006	zgc:171927	100	92.056	Amphilophus_citrinellus
ENSPLAG00000005869	zgc:171927	71	89.032	ENSAOCG00000013808	-	93	97.521	Amphiprion_ocellaris
ENSPLAG00000005869	zgc:171927	100	90.654	ENSAOCG00000024149	-	100	90.654	Amphiprion_ocellaris
ENSPLAG00000005869	zgc:171927	100	91.121	ENSAPEG00000022171	zgc:171927	99	91.121	Amphiprion_percula
ENSPLAG00000005869	zgc:171927	100	92.056	ENSATEG00000003430	zgc:171927	100	92.056	Anabas_testudineus
ENSPLAG00000005869	zgc:171927	100	92.056	ENSACLG00000013734	-	100	92.056	Astatotilapia_calliptera
ENSPLAG00000005869	zgc:171927	100	78.140	ENSAMXG00000039486	zgc:171927	100	78.140	Astyanax_mexicanus
ENSPLAG00000005869	zgc:171927	100	88.318	ENSCSEG00000014416	zgc:171927	100	88.318	Cynoglossus_semilaevis
ENSPLAG00000005869	zgc:171927	100	92.991	ENSCVAG00000009222	zgc:171927	100	92.991	Cyprinodon_variegatus
ENSPLAG00000005869	zgc:171927	100	78.140	ENSDARG00000033056	zgc:171927	100	78.140	Danio_rerio
ENSPLAG00000005869	zgc:171927	100	78.704	ENSELUG00000011680	zgc:171927	100	78.704	Esox_lucius
ENSPLAG00000005869	zgc:171927	100	92.991	ENSFHEG00000022176	zgc:171927	100	92.991	Fundulus_heteroclitus
ENSPLAG00000005869	zgc:171927	98	76.303	ENSGMOG00000004979	-	97	76.303	Gadus_morhua
ENSPLAG00000005869	zgc:171927	98	95.694	ENSGAFG00000015702	zgc:171927	84	95.694	Gambusia_affinis
ENSPLAG00000005869	zgc:171927	100	88.785	ENSGACG00000013401	zgc:171927	99	88.785	Gasterosteus_aculeatus
ENSPLAG00000005869	zgc:171927	100	92.056	ENSHBUG00000002397	-	100	92.056	Haplochromis_burtoni
ENSPLAG00000005869	zgc:171927	100	91.589	ENSKMAG00000009856	zgc:171927	100	91.589	Kryptolebias_marmoratus
ENSPLAG00000005869	zgc:171927	98	89.474	ENSLBEG00000027226	-	89	89.474	Labrus_bergylta
ENSPLAG00000005869	zgc:171927	100	90.187	ENSLBEG00000005791	-	100	90.187	Labrus_bergylta
ENSPLAG00000005869	zgc:171927	98	71.429	ENSLOCG00000014692	zgc:171927	96	71.429	Lepisosteus_oculatus
ENSPLAG00000005869	zgc:171927	100	89.720	ENSMAMG00000020135	zgc:171927	100	89.720	Mastacembelus_armatus
ENSPLAG00000005869	zgc:171927	100	92.056	ENSMZEG00005024685	-	100	92.056	Maylandia_zebra
ENSPLAG00000005869	zgc:171927	100	86.449	ENSMMOG00000009833	-	100	86.449	Mola_mola
ENSPLAG00000005869	zgc:171927	100	88.318	ENSMALG00000021129	zgc:171927	100	88.318	Monopterus_albus
ENSPLAG00000005869	zgc:171927	100	91.589	ENSNBRG00000006202	zgc:171927	100	91.589	Neolamprologus_brichardi
ENSPLAG00000005869	zgc:171927	100	89.252	ENSORLG00000000602	zgc:171927	100	89.252	Oryzias_latipes
ENSPLAG00000005869	zgc:171927	100	89.252	ENSORLG00020021071	zgc:171927	100	89.252	Oryzias_latipes_hni
ENSPLAG00000005869	zgc:171927	100	89.252	ENSORLG00015010098	zgc:171927	100	89.252	Oryzias_latipes_hsok
ENSPLAG00000005869	zgc:171927	100	91.121	ENSOMEG00000020594	zgc:171927	100	91.121	Oryzias_melastigma
ENSPLAG00000005869	zgc:171927	100	98.131	ENSPFOG00000013810	zgc:171927	99	98.131	Poecilia_formosa
ENSPLAG00000005869	zgc:171927	100	98.131	ENSPMEG00000022350	zgc:171927	100	98.131	Poecilia_mexicana
ENSPLAG00000005869	zgc:171927	100	98.131	ENSPREG00000017517	zgc:171927	100	98.131	Poecilia_reticulata
ENSPLAG00000005869	zgc:171927	100	92.056	ENSPNYG00000007520	-	100	92.056	Pundamilia_nyererei
ENSPLAG00000005869	zgc:171927	100	79.070	ENSPNAG00000029574	zgc:171927	100	79.070	Pygocentrus_nattereri
ENSPLAG00000005869	zgc:171927	100	76.744	ENSSFOG00015005464	zgc:171927	99	76.744	Scleropages_formosus
ENSPLAG00000005869	zgc:171927	100	89.720	ENSSMAG00000004416	-	100	89.720	Scophthalmus_maximus
ENSPLAG00000005869	zgc:171927	100	92.523	ENSSDUG00000004445	zgc:171927	100	92.523	Seriola_dumerili
ENSPLAG00000005869	zgc:171927	100	92.523	ENSSLDG00000018024	zgc:171927	100	92.523	Seriola_lalandi_dorsalis
ENSPLAG00000005869	zgc:171927	100	92.523	ENSSPAG00000013533	zgc:171927	100	92.523	Stegastes_partitus
ENSPLAG00000005869	zgc:171927	100	96.262	ENSXCOG00000010695	zgc:171927	100	96.262	Xiphophorus_couchianus
ENSPLAG00000005869	zgc:171927	100	96.729	ENSXMAG00000004683	zgc:171927	100	96.729	Xiphophorus_maculatus