EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000005880 (Gene tree)
Gene ID: 106964639
Gene Symbol: exosc1
Alias: -
Full Name: exosome component 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 12583 bases
Position: chrKQ547009.1:110778-123360
Accession: 106964639
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000004233	EXOSC1	PF10447.9	1.1e-14	1	1
ENSPLAP00000004219	EXOSC1	PF10447.9	1.8e-12	1	1
ENSPLAP00000004233	ECR1_N	PF14382.6	2.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000010009	-	489	-	ENSPLAP00000004219	162 (aa)	-	-
ENSPLAT00000009989	-	3054	XM_015060270	ENSPLAP00000004233	194 (aa)	XP_014915756	-

Gene Model

Click here to download ENSPLAG00000005880's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000005880's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000005880	exosc1	98	76.440	ENSG00000171311	EXOSC1	98	76.440	Homo_sapiens
ENSPLAG00000005880	exosc1	100	89.175	ENSAPOG00000007822	exosc1	100	89.175	Acanthochromis_polyacanthus
ENSPLAG00000005880	exosc1	98	76.440	ENSAMEG00000000129	EXOSC1	98	76.440	Ailuropoda_melanoleuca
ENSPLAG00000005880	exosc1	95	88.108	ENSACIG00000018956	exosc1	91	88.108	Amphilophus_citrinellus
ENSPLAG00000005880	exosc1	100	88.144	ENSAOCG00000010699	exosc1	100	88.144	Amphiprion_ocellaris
ENSPLAG00000005880	exosc1	93	78.333	ENSAPEG00000012690	exosc1	97	78.333	Amphiprion_percula
ENSPLAG00000005880	exosc1	100	88.144	ENSATEG00000018683	exosc1	100	88.144	Anabas_testudineus
ENSPLAG00000005880	exosc1	99	70.984	ENSACAG00000002101	EXOSC1	99	70.984	Anolis_carolinensis
ENSPLAG00000005880	exosc1	98	76.440	ENSANAG00000034669	EXOSC1	98	76.440	Aotus_nancymaae
ENSPLAG00000005880	exosc1	100	88.144	ENSACLG00000021243	exosc1	100	88.144	Astatotilapia_calliptera
ENSPLAG00000005880	exosc1	100	85.567	ENSAMXG00000011116	exosc1	100	85.567	Astyanax_mexicanus
ENSPLAG00000005880	exosc1	98	76.440	ENSBTAG00000012699	EXOSC1	98	76.440	Bos_taurus
ENSPLAG00000005880	exosc1	94	35.602	WBGene00012966	exos-1	92	35.602	Caenorhabditis_elegans
ENSPLAG00000005880	exosc1	98	75.916	ENSCJAG00000016586	EXOSC1	98	75.916	Callithrix_jacchus
ENSPLAG00000005880	exosc1	99	75.521	ENSCAFG00000009068	EXOSC1	93	75.521	Canis_familiaris
ENSPLAG00000005880	exosc1	99	75.521	ENSCAFG00020006002	EXOSC1	93	75.521	Canis_lupus_dingo
ENSPLAG00000005880	exosc1	98	76.440	ENSCHIG00000015253	EXOSC1	98	76.440	Capra_hircus
ENSPLAG00000005880	exosc1	98	75.393	ENSTSYG00000000760	EXOSC1	98	75.393	Carlito_syrichta
ENSPLAG00000005880	exosc1	99	75.521	ENSCPOG00000001173	EXOSC1	98	75.521	Cavia_porcellus
ENSPLAG00000005880	exosc1	99	39.175	ENSCCAG00000023986	EXOSC1	98	39.175	Cebus_capucinus
ENSPLAG00000005880	exosc1	98	76.440	ENSCATG00000034114	EXOSC1	98	76.440	Cercocebus_atys
ENSPLAG00000005880	exosc1	98	75.916	ENSCLAG00000002463	EXOSC1	98	75.916	Chinchilla_lanigera
ENSPLAG00000005880	exosc1	98	75.916	ENSCSAG00000005870	EXOSC1	98	75.916	Chlorocebus_sabaeus
ENSPLAG00000005880	exosc1	95	64.130	ENSCHOG00000006477	EXOSC1	98	64.130	Choloepus_hoffmanni
ENSPLAG00000005880	exosc1	55	64.486	ENSCPBG00000011949	EXOSC1	88	64.486	Chrysemys_picta_bellii
ENSPLAG00000005880	exosc1	96	50.532	ENSCING00000022734	-	90	50.532	Ciona_intestinalis
ENSPLAG00000005880	exosc1	99	54.404	ENSCSAVG00000010865	-	98	54.404	Ciona_savignyi
ENSPLAG00000005880	exosc1	98	76.440	ENSCANG00000034159	EXOSC1	98	76.440	Colobus_angolensis_palliatus
ENSPLAG00000005880	exosc1	98	74.869	ENSCGRG00001000335	Exosc1	98	74.869	Cricetulus_griseus_chok1gshd
ENSPLAG00000005880	exosc1	98	74.869	ENSCGRG00000011602	Exosc1	98	74.869	Cricetulus_griseus_crigri
ENSPLAG00000005880	exosc1	98	87.342	ENSCSEG00000007895	exosc1	90	87.342	Cynoglossus_semilaevis
ENSPLAG00000005880	exosc1	100	96.392	ENSCVAG00000016748	exosc1	100	96.392	Cyprinodon_variegatus
ENSPLAG00000005880	exosc1	100	85.567	ENSDARG00000059841	exosc1	100	85.567	Danio_rerio
ENSPLAG00000005880	exosc1	74	73.793	ENSDNOG00000007983	EXOSC1	98	73.793	Dasypus_novemcinctus
ENSPLAG00000005880	exosc1	98	75.393	ENSDORG00000016528	Exosc1	98	75.393	Dipodomys_ordii
ENSPLAG00000005880	exosc1	95	48.421	FBgn0032346	Csl4	92	48.421	Drosophila_melanogaster
ENSPLAG00000005880	exosc1	98	74.346	ENSETEG00000002469	-	98	74.346	Echinops_telfairi
ENSPLAG00000005880	exosc1	97	61.979	ENSEBUG00000008164	exosc1	96	61.979	Eptatretus_burgeri
ENSPLAG00000005880	exosc1	98	67.539	ENSEASG00005008684	EXOSC1	98	67.539	Equus_asinus_asinus
ENSPLAG00000005880	exosc1	60	54.310	ENSECAG00000010621	EXOSC1	69	54.310	Equus_caballus
ENSPLAG00000005880	exosc1	98	75.393	ENSEEUG00000005647	EXOSC1	98	75.393	Erinaceus_europaeus
ENSPLAG00000005880	exosc1	99	84.264	ENSELUG00000017369	exosc1	92	82.278	Esox_lucius
ENSPLAG00000005880	exosc1	98	76.440	ENSFCAG00000040563	EXOSC1	92	76.440	Felis_catus
ENSPLAG00000005880	exosc1	98	73.822	ENSFALG00000008450	EXOSC1	98	73.822	Ficedula_albicollis
ENSPLAG00000005880	exosc1	98	76.440	ENSFDAG00000000846	EXOSC1	98	76.440	Fukomys_damarensis
ENSPLAG00000005880	exosc1	100	95.361	ENSFHEG00000009154	exosc1	100	95.361	Fundulus_heteroclitus
ENSPLAG00000005880	exosc1	100	86.082	ENSGMOG00000008993	exosc1	100	86.082	Gadus_morhua
ENSPLAG00000005880	exosc1	97	71.975	ENSGALG00000039917	EXOSC1	99	79.310	Gallus_gallus
ENSPLAG00000005880	exosc1	100	98.454	ENSGAFG00000010265	exosc1	95	98.454	Gambusia_affinis
ENSPLAG00000005880	exosc1	100	85.052	ENSGACG00000018936	exosc1	100	85.052	Gasterosteus_aculeatus
ENSPLAG00000005880	exosc1	98	72.775	ENSGAGG00000019192	EXOSC1	98	72.775	Gopherus_agassizii
ENSPLAG00000005880	exosc1	97	74.522	ENSGGOG00000003099	EXOSC1	92	74.522	Gorilla_gorilla
ENSPLAG00000005880	exosc1	100	88.144	ENSHBUG00000017857	exosc1	100	88.144	Haplochromis_burtoni
ENSPLAG00000005880	exosc1	98	75.916	ENSHGLG00000016927	EXOSC1	98	75.916	Heterocephalus_glaber_female
ENSPLAG00000005880	exosc1	98	75.916	ENSHGLG00100012208	EXOSC1	98	75.916	Heterocephalus_glaber_male
ENSPLAG00000005880	exosc1	100	86.598	ENSHCOG00000019882	exosc1	100	86.598	Hippocampus_comes
ENSPLAG00000005880	exosc1	100	84.021	ENSIPUG00000007685	exosc1	100	84.021	Ictalurus_punctatus
ENSPLAG00000005880	exosc1	61	61.345	ENSSTOG00000029860	-	91	61.345	Ictidomys_tridecemlineatus
ENSPLAG00000005880	exosc1	99	75.000	ENSSTOG00000006615	EXOSC1	98	75.000	Ictidomys_tridecemlineatus
ENSPLAG00000005880	exosc1	98	76.440	ENSJJAG00000013311	Exosc1	98	76.440	Jaculus_jaculus
ENSPLAG00000005880	exosc1	100	86.598	ENSKMAG00000001202	exosc1	82	86.598	Kryptolebias_marmoratus
ENSPLAG00000005880	exosc1	100	88.144	ENSLBEG00000011448	exosc1	100	88.144	Labrus_bergylta
ENSPLAG00000005880	exosc1	100	62.000	ENSLOCG00000003776	exosc1	100	62.000	Lepisosteus_oculatus
ENSPLAG00000005880	exosc1	98	75.916	ENSLAFG00000015983	EXOSC1	98	75.916	Loxodonta_africana
ENSPLAG00000005880	exosc1	98	76.440	ENSMFAG00000001493	EXOSC1	98	76.440	Macaca_fascicularis
ENSPLAG00000005880	exosc1	98	76.440	ENSMMUG00000020028	EXOSC1	98	70.256	Macaca_mulatta
ENSPLAG00000005880	exosc1	98	76.440	ENSMNEG00000029816	EXOSC1	98	76.440	Macaca_nemestrina
ENSPLAG00000005880	exosc1	98	71.728	ENSMLEG00000027643	EXOSC1	98	71.728	Mandrillus_leucophaeus
ENSPLAG00000005880	exosc1	100	89.691	ENSMAMG00000012200	exosc1	100	89.691	Mastacembelus_armatus
ENSPLAG00000005880	exosc1	100	88.144	ENSMZEG00005007042	exosc1	100	88.144	Maylandia_zebra
ENSPLAG00000005880	exosc1	97	74.522	ENSMAUG00000020462	-	92	74.522	Mesocricetus_auratus
ENSPLAG00000005880	exosc1	99	75.521	ENSMICG00000007664	EXOSC1	92	75.159	Microcebus_murinus
ENSPLAG00000005880	exosc1	97	70.000	ENSMOCG00000017124	-	97	70.000	Microtus_ochrogaster
ENSPLAG00000005880	exosc1	98	74.869	ENSMOCG00000006004	-	98	74.869	Microtus_ochrogaster
ENSPLAG00000005880	exosc1	98	69.182	ENSMMOG00000021403	exosc1	100	67.010	Mola_mola
ENSPLAG00000005880	exosc1	99	75.648	ENSMODG00000004213	EXOSC1	98	75.648	Monodelphis_domestica
ENSPLAG00000005880	exosc1	95	89.730	ENSMALG00000007061	exosc1	93	89.730	Monopterus_albus
ENSPLAG00000005880	exosc1	98	74.346	MGP_CAROLIEiJ_G0022959	Exosc1	98	74.346	Mus_caroli
ENSPLAG00000005880	exosc1	98	74.869	ENSMUSG00000034321	Exosc1	98	74.869	Mus_musculus
ENSPLAG00000005880	exosc1	98	74.869	MGP_PahariEiJ_G0014449	Exosc1	98	74.869	Mus_pahari
ENSPLAG00000005880	exosc1	98	74.346	MGP_SPRETEiJ_G0023880	Exosc1	98	74.346	Mus_spretus
ENSPLAG00000005880	exosc1	98	76.440	ENSMPUG00000017044	EXOSC1	98	76.440	Mustela_putorius_furo
ENSPLAG00000005880	exosc1	98	75.916	ENSMLUG00000009228	EXOSC1	98	75.916	Myotis_lucifugus
ENSPLAG00000005880	exosc1	98	73.822	ENSNGAG00000022033	Exosc1	98	73.822	Nannospalax_galili
ENSPLAG00000005880	exosc1	100	69.072	ENSNBRG00000024007	exosc1	99	69.072	Neolamprologus_brichardi
ENSPLAG00000005880	exosc1	98	75.916	ENSNLEG00000013872	EXOSC1	98	75.916	Nomascus_leucogenys
ENSPLAG00000005880	exosc1	58	68.750	ENSMEUG00000002246	EXOSC1	97	68.750	Notamacropus_eugenii
ENSPLAG00000005880	exosc1	98	74.869	ENSOPRG00000005065	EXOSC1	98	74.869	Ochotona_princeps
ENSPLAG00000005880	exosc1	98	76.440	ENSODEG00000016709	EXOSC1	98	76.440	Octodon_degus
ENSPLAG00000005880	exosc1	100	87.629	ENSONIG00000017683	exosc1	99	87.629	Oreochromis_niloticus
ENSPLAG00000005880	exosc1	70	85.965	ENSOANG00000006563	EXOSC1	98	82.927	Ornithorhynchus_anatinus
ENSPLAG00000005880	exosc1	99	69.792	ENSOCUG00000026461	-	98	69.792	Oryctolagus_cuniculus
ENSPLAG00000005880	exosc1	98	74.479	ENSOCUG00000011898	-	98	74.479	Oryctolagus_cuniculus
ENSPLAG00000005880	exosc1	100	86.154	ENSORLG00000011595	exosc1	100	86.154	Oryzias_latipes
ENSPLAG00000005880	exosc1	100	86.154	ENSORLG00020005831	exosc1	100	86.154	Oryzias_latipes_hni
ENSPLAG00000005880	exosc1	100	86.154	ENSORLG00015004317	exosc1	100	86.154	Oryzias_latipes_hsok
ENSPLAG00000005880	exosc1	100	73.711	ENSOMEG00000013907	exosc1	99	73.711	Oryzias_melastigma
ENSPLAG00000005880	exosc1	98	75.393	ENSOGAG00000016259	EXOSC1	98	75.393	Otolemur_garnettii
ENSPLAG00000005880	exosc1	98	75.916	ENSOARG00000010136	EXOSC1	98	75.916	Ovis_aries
ENSPLAG00000005880	exosc1	98	71.503	ENSPPAG00000039842	EXOSC1	98	71.503	Pan_paniscus
ENSPLAG00000005880	exosc1	98	76.440	ENSPPRG00000023366	EXOSC1	98	76.440	Panthera_pardus
ENSPLAG00000005880	exosc1	98	76.440	ENSPTIG00000017701	EXOSC1	98	76.440	Panthera_tigris_altaica
ENSPLAG00000005880	exosc1	98	76.440	ENSPTRG00000002808	EXOSC1	98	76.440	Pan_troglodytes
ENSPLAG00000005880	exosc1	98	76.440	ENSPANG00000021324	EXOSC1	98	76.440	Papio_anubis
ENSPLAG00000005880	exosc1	100	86.082	ENSPKIG00000016037	exosc1	100	86.082	Paramormyrops_kingsleyae
ENSPLAG00000005880	exosc1	75	75.207	ENSPSIG00000013571	EXOSC1	98	74.380	Pelodiscus_sinensis
ENSPLAG00000005880	exosc1	98	89.241	ENSPMGG00000014002	exosc1	93	89.241	Periophthalmus_magnuspinnatus
ENSPLAG00000005880	exosc1	98	74.869	ENSPEMG00000010710	-	98	74.869	Peromyscus_maniculatus_bairdii
ENSPLAG00000005880	exosc1	96	65.241	ENSPMAG00000000195	exosc1	95	65.241	Petromyzon_marinus
ENSPLAG00000005880	exosc1	99	74.479	ENSPCIG00000002210	EXOSC1	97	74.479	Phascolarctos_cinereus
ENSPLAG00000005880	exosc1	100	100.000	ENSPFOG00000006755	exosc1	95	100.000	Poecilia_formosa
ENSPLAG00000005880	exosc1	100	100.000	ENSPMEG00000015598	exosc1	95	100.000	Poecilia_mexicana
ENSPLAG00000005880	exosc1	98	98.734	ENSPREG00000000405	exosc1	88	98.734	Poecilia_reticulata
ENSPLAG00000005880	exosc1	99	76.042	ENSPPYG00000002531	EXOSC1	98	76.042	Pongo_abelii
ENSPLAG00000005880	exosc1	98	74.869	ENSPCAG00000009135	EXOSC1	98	74.869	Procavia_capensis
ENSPLAG00000005880	exosc1	98	70.681	ENSPCOG00000027539	EXOSC1	98	70.681	Propithecus_coquereli
ENSPLAG00000005880	exosc1	98	75.916	ENSPVAG00000003372	EXOSC1	98	75.916	Pteropus_vampyrus
ENSPLAG00000005880	exosc1	100	88.144	ENSPNYG00000021745	exosc1	100	88.144	Pundamilia_nyererei
ENSPLAG00000005880	exosc1	100	84.536	ENSPNAG00000001944	exosc1	100	84.536	Pygocentrus_nattereri
ENSPLAG00000005880	exosc1	98	74.869	ENSRNOG00000048708	Exosc1	98	74.869	Rattus_norvegicus
ENSPLAG00000005880	exosc1	98	76.440	ENSRBIG00000035618	EXOSC1	98	76.440	Rhinopithecus_bieti
ENSPLAG00000005880	exosc1	98	76.440	ENSRROG00000032589	EXOSC1	91	76.440	Rhinopithecus_roxellana
ENSPLAG00000005880	exosc1	98	76.440	ENSSBOG00000000359	EXOSC1	98	76.440	Saimiri_boliviensis_boliviensis
ENSPLAG00000005880	exosc1	75	83.740	ENSSHAG00000018219	EXOSC1	100	82.993	Sarcophilus_harrisii
ENSPLAG00000005880	exosc1	100	82.474	ENSSFOG00015016289	-	100	82.474	Scleropages_formosus
ENSPLAG00000005880	exosc1	100	84.021	ENSSFOG00015009069	exosc1	100	84.021	Scleropages_formosus
ENSPLAG00000005880	exosc1	100	87.629	ENSSMAG00000003721	exosc1	100	87.629	Scophthalmus_maximus
ENSPLAG00000005880	exosc1	100	87.113	ENSSDUG00000002993	exosc1	100	87.113	Seriola_dumerili
ENSPLAG00000005880	exosc1	100	87.113	ENSSLDG00000025181	exosc1	100	87.113	Seriola_lalandi_dorsalis
ENSPLAG00000005880	exosc1	98	64.398	ENSSARG00000000162	EXOSC1	98	64.398	Sorex_araneus
ENSPLAG00000005880	exosc1	98	70.157	ENSSPUG00000012263	EXOSC1	98	70.157	Sphenodon_punctatus
ENSPLAG00000005880	exosc1	100	80.412	ENSSPAG00000016792	exosc1	83	80.412	Stegastes_partitus
ENSPLAG00000005880	exosc1	98	75.916	ENSSSCG00000010518	EXOSC1	89	75.916	Sus_scrofa
ENSPLAG00000005880	exosc1	98	73.298	ENSTGUG00000009692	EXOSC1	98	73.298	Taeniopygia_guttata
ENSPLAG00000005880	exosc1	98	79.474	ENSTRUG00000007706	exosc1	98	79.474	Takifugu_rubripes
ENSPLAG00000005880	exosc1	98	78.238	ENSTNIG00000014079	exosc1	97	78.238	Tetraodon_nigroviridis
ENSPLAG00000005880	exosc1	98	70.157	ENSTBEG00000006011	EXOSC1	98	70.157	Tupaia_belangeri
ENSPLAG00000005880	exosc1	94	77.049	ENSTTRG00000009887	EXOSC1	99	77.049	Tursiops_truncatus
ENSPLAG00000005880	exosc1	98	60.204	ENSUAMG00000010266	EXOSC1	98	60.204	Ursus_americanus
ENSPLAG00000005880	exosc1	98	61.257	ENSUMAG00000022002	EXOSC1	98	61.257	Ursus_maritimus
ENSPLAG00000005880	exosc1	98	75.916	ENSVVUG00000023192	EXOSC1	62	75.916	Vulpes_vulpes
ENSPLAG00000005880	exosc1	99	72.539	ENSXETG00000003434	exosc1	99	72.539	Xenopus_tropicalis
ENSPLAG00000005880	exosc1	75	100.000	ENSXCOG00000014499	exosc1	93	100.000	Xiphophorus_couchianus
ENSPLAG00000005880	exosc1	98	99.367	ENSXMAG00000023382	exosc1	88	99.367	Xiphophorus_maculatus