EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000005897 (Gene tree)
Gene ID: 106951056
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 420-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 14704 bases
Position: chrKQ545752.1:273189-287892
Accession: 106951056
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000004255	zf-C2H2	PF00096.26	1.5e-45	1	6
ENSPLAP00000004255	zf-C2H2	PF00096.26	1.5e-45	2	6
ENSPLAP00000004255	zf-C2H2	PF00096.26	1.5e-45	3	6
ENSPLAP00000004255	zf-C2H2	PF00096.26	1.5e-45	4	6
ENSPLAP00000004255	zf-C2H2	PF00096.26	1.5e-45	5	6
ENSPLAP00000004255	zf-C2H2	PF00096.26	1.5e-45	6	6
ENSPLAP00000004255	zf-met	PF12874.7	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000009948	-	5502	XM_015038320	ENSPLAP00000004255	1273 (aa)	XP_014893806	UPI00072DD8DF

Gene Model

Click here to download ENSPLAG00000005897's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000005897's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000005897	-	52	42.149	ENSPLAG00000004735	-	96	38.247
ENSPLAG00000005897	-	51	31.461	ENSPLAG00000007917	zbtb47b	85	36.810
ENSPLAG00000005897	-	50	34.328	ENSPLAG00000009651	-	68	43.077
ENSPLAG00000005897	-	50	44.643	ENSPLAG00000016823	-	93	44.828
ENSPLAG00000005897	-	50	32.162	ENSPLAG00000002892	-	85	32.162
ENSPLAG00000005897	-	52	30.769	ENSPLAG00000015083	-	77	30.769
ENSPLAG00000005897	-	50	44.186	ENSPLAG00000006191	-	62	44.186
ENSPLAG00000005897	-	50	30.971	ENSPLAG00000016384	-	81	32.071
ENSPLAG00000005897	-	50	42.105	ENSPLAG00000002838	-	97	38.621

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000005897	-	51	38.919	ENSCSEG00000001771	-	63	34.553	Cynoglossus_semilaevis
ENSPLAG00000005897	-	50	32.296	ENSEBUG00000011244	-	86	32.296	Eptatretus_burgeri
ENSPLAG00000005897	-	100	99.451	ENSPFOG00000007708	-	100	99.451	Poecilia_formosa
ENSPLAG00000005897	-	100	98.587	ENSPMEG00000021030	-	100	98.587	Poecilia_mexicana
ENSPLAG00000005897	-	50	32.114	ENSSDUG00000005401	-	85	31.760	Seriola_dumerili
ENSPLAG00000005897	-	50	43.787	ENSTTRG00000004891	-	56	43.787	Tursiops_truncatus