EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000005912 (Gene tree)
Gene ID: 106940226
Gene Symbol: snrnp70
Alias: -
Full Name: small nuclear ribonucleoprotein U1 subunit 70
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 25034 bases
Position: chrKQ548408.1:27218-52251
Accession: 106940226
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000021858	RRM_1	PF00076.22	1.3e-19	1	1
ENSPLAP00000021858	U1snRNP70_N	PF12220.8	4.9e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000009924	-	2399	XM_015022907	ENSPLAP00000021858	466 (aa)	XP_014878393	UPI00072DED15

Gene Model

Click here to download ENSPLAG00000005912's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000005912's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000005912	snrnp70	100	82.090	ENSACIG00000017909	snrnp70	100	81.450	Amphilophus_citrinellus
ENSPLAG00000005912	snrnp70	100	81.590	ENSACLG00000011144	snrnp70	100	77.101	Astatotilapia_calliptera
ENSPLAG00000005912	snrnp70	54	47.431	WBGene00004390	rnp-7	56	51.596	Caenorhabditis_elegans
ENSPLAG00000005912	snrnp70	100	88.060	ENSFHEG00000010298	snrnp70	100	89.126	Fundulus_heteroclitus
ENSPLAG00000005912	snrnp70	100	97.430	ENSGAFG00000003395	snrnp70	100	97.430	Gambusia_affinis
ENSPLAG00000005912	snrnp70	100	80.128	ENSHBUG00000018856	snrnp70	100	76.496	Haplochromis_burtoni
ENSPLAG00000005912	snrnp70	100	71.915	ENSHCOG00000010270	snrnp70	100	73.617	Hippocampus_comes
ENSPLAG00000005912	snrnp70	54	83.465	ENSLAFG00000028536	SNRNP70	96	92.342	Loxodonta_africana
ENSPLAG00000005912	snrnp70	100	77.282	ENSMAMG00000004556	snrnp70	100	82.378	Mastacembelus_armatus
ENSPLAG00000005912	snrnp70	100	79.744	ENSMZEG00005022849	snrnp70	100	78.252	Maylandia_zebra
ENSPLAG00000005912	snrnp70	74	86.087	ENSMALG00000002275	snrnp70	89	84.396	Monopterus_albus
ENSPLAG00000005912	snrnp70	100	77.378	ENSORLG00000017158	snrnp70	100	75.796	Oryzias_latipes
ENSPLAG00000005912	snrnp70	100	77.590	ENSORLG00015010817	snrnp70	100	75.796	Oryzias_latipes_hsok
ENSPLAG00000005912	snrnp70	100	80.769	ENSOMEG00000013002	snrnp70	100	75.107	Oryzias_melastigma
ENSPLAG00000005912	snrnp70	50	90.043	ENSOARG00000012608	SNRNP70	61	91.556	Ovis_aries
ENSPLAG00000005912	snrnp70	100	99.785	ENSPFOG00000016671	snrnp70	100	99.785	Poecilia_formosa
ENSPLAG00000005912	snrnp70	100	99.785	ENSPMEG00000008496	snrnp70	100	99.785	Poecilia_mexicana
ENSPLAG00000005912	snrnp70	100	99.356	ENSPREG00000005486	snrnp70	100	99.356	Poecilia_reticulata
ENSPLAG00000005912	snrnp70	57	73.485	ENSPCOG00000023103	SNRNP70	79	84.234	Propithecus_coquereli
ENSPLAG00000005912	snrnp70	100	79.957	ENSPNYG00000003258	snrnp70	100	76.333	Pundamilia_nyererei
ENSPLAG00000005912	snrnp70	100	72.921	ENSTRUG00000009202	snrnp70	100	73.348	Takifugu_rubripes
ENSPLAG00000005912	snrnp70	100	98.077	ENSXMAG00000012789	snrnp70	100	98.077	Xiphophorus_maculatus