EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000005974 (Gene tree)
Gene ID: 106961070
Gene Symbol: prpf6
Alias: -
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 11518 bases
Position: chrKQ545371.1:537469-548986
Accession: 106961070
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000021853	PRP1_N	PF06424.12	3.7e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000009902	-	3724	XM_015054573	ENSPLAP00000021853	969 (aa)	XP_014910059	UPI00072E532F

Gene Model

Click here to download ENSPLAG00000005974's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000005974's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000005974	prpf6	96	92.561	ENSG00000101161	PRPF6	100	92.136	Homo_sapiens
ENSPLAG00000005974	prpf6	100	97.317	ENSAPOG00000010395	prpf6	100	97.317	Acanthochromis_polyacanthus
ENSPLAG00000005974	prpf6	96	92.144	ENSAMEG00000001916	PRPF6	99	91.720	Ailuropoda_melanoleuca
ENSPLAG00000005974	prpf6	100	97.626	ENSACIG00000019862	prpf6	100	97.626	Amphilophus_citrinellus
ENSPLAG00000005974	prpf6	100	97.420	ENSAOCG00000012988	prpf6	100	97.420	Amphiprion_ocellaris
ENSPLAG00000005974	prpf6	96	91.290	ENSAPEG00000008301	prpf6	100	91.505	Amphiprion_percula
ENSPLAG00000005974	prpf6	100	97.007	ENSATEG00000005581	prpf6	100	97.007	Anabas_testudineus
ENSPLAG00000005974	prpf6	96	93.199	ENSACAG00000006464	PRPF6	95	92.774	Anolis_carolinensis
ENSPLAG00000005974	prpf6	96	92.561	ENSANAG00000012661	PRPF6	100	93.168	Aotus_nancymaae
ENSPLAG00000005974	prpf6	100	97.626	ENSACLG00000025875	prpf6	100	97.626	Astatotilapia_calliptera
ENSPLAG00000005974	prpf6	97	94.280	ENSAMXG00000001929	prpf6	100	92.520	Astyanax_mexicanus
ENSPLAG00000005974	prpf6	96	93.092	ENSBTAG00000011656	PRPF6	100	92.667	Bos_taurus
ENSPLAG00000005974	prpf6	96	92.561	ENSCJAG00000010616	PRPF6	100	92.136	Callithrix_jacchus
ENSPLAG00000005974	prpf6	96	93.199	ENSCAFG00000013165	PRPF6	100	92.774	Canis_familiaris
ENSPLAG00000005974	prpf6	96	93.199	ENSCAFG00020002050	PRPF6	100	92.774	Canis_lupus_dingo
ENSPLAG00000005974	prpf6	96	93.092	ENSCHIG00000018187	PRPF6	100	92.667	Capra_hircus
ENSPLAG00000005974	prpf6	96	93.199	ENSTSYG00000007814	PRPF6	100	92.774	Carlito_syrichta
ENSPLAG00000005974	prpf6	93	92.366	ENSCAPG00000015077	PRPF6	100	91.494	Cavia_aperea
ENSPLAG00000005974	prpf6	96	93.624	ENSCPOG00000007518	PRPF6	100	93.199	Cavia_porcellus
ENSPLAG00000005974	prpf6	96	89.479	ENSCCAG00000024564	PRPF6	100	89.054	Cebus_capucinus
ENSPLAG00000005974	prpf6	96	92.667	ENSCATG00000037473	PRPF6	100	92.242	Cercocebus_atys
ENSPLAG00000005974	prpf6	96	89.798	ENSCLAG00000003854	PRPF6	100	89.373	Chinchilla_lanigera
ENSPLAG00000005974	prpf6	96	88.068	ENSCSAG00000016742	PRPF6	100	87.645	Chlorocebus_sabaeus
ENSPLAG00000005974	prpf6	81	78.049	ENSCHOG00000003315	-	98	77.851	Choloepus_hoffmanni
ENSPLAG00000005974	prpf6	98	91.883	ENSCPBG00000013964	PRPF6	96	92.979	Chrysemys_picta_bellii
ENSPLAG00000005974	prpf6	96	72.622	ENSCING00000008817	-	99	72.199	Ciona_intestinalis
ENSPLAG00000005974	prpf6	96	92.455	ENSCANG00000038230	PRPF6	100	92.030	Colobus_angolensis_palliatus
ENSPLAG00000005974	prpf6	96	93.624	ENSCGRG00001022666	Prpf6	100	93.199	Cricetulus_griseus_chok1gshd
ENSPLAG00000005974	prpf6	96	91.935	ENSCSEG00000018561	prpf6	100	91.935	Cynoglossus_semilaevis
ENSPLAG00000005974	prpf6	100	97.626	ENSCVAG00000010550	prpf6	100	97.626	Cyprinodon_variegatus
ENSPLAG00000005974	prpf6	100	92.725	ENSDARG00000091367	prpf6	100	94.386	Danio_rerio
ENSPLAG00000005974	prpf6	96	92.561	ENSDNOG00000040544	PRPF6	100	92.242	Dasypus_novemcinctus
ENSPLAG00000005974	prpf6	87	92.640	ENSDORG00000005406	Prpf6	100	92.640	Dipodomys_ordii
ENSPLAG00000005974	prpf6	96	71.505	FBgn0036828	CG6841	99	71.613	Drosophila_melanogaster
ENSPLAG00000005974	prpf6	83	91.813	ENSETEG00000004447	PRPF6	85	91.813	Echinops_telfairi
ENSPLAG00000005974	prpf6	96	86.349	ENSEBUG00000008835	prpf6	100	85.926	Eptatretus_burgeri
ENSPLAG00000005974	prpf6	98	92.050	ENSEASG00005023115	PRPF6	100	92.880	Equus_asinus_asinus
ENSPLAG00000005974	prpf6	96	89.054	ENSECAG00000013983	PRPF6	100	88.629	Equus_caballus
ENSPLAG00000005974	prpf6	86	95.833	ENSEEUG00000000180	PRPF6	81	95.833	Erinaceus_europaeus
ENSPLAG00000005974	prpf6	97	94.486	ENSELUG00000001945	prpf6	94	94.486	Esox_lucius
ENSPLAG00000005974	prpf6	96	93.199	ENSFCAG00000001183	PRPF6	100	92.774	Felis_catus
ENSPLAG00000005974	prpf6	96	93.122	ENSFALG00000010326	-	98	92.804	Ficedula_albicollis
ENSPLAG00000005974	prpf6	99	85.139	ENSFALG00000006046	-	97	87.193	Ficedula_albicollis
ENSPLAG00000005974	prpf6	96	92.136	ENSFDAG00000006451	PRPF6	100	92.857	Fukomys_damarensis
ENSPLAG00000005974	prpf6	100	97.936	ENSFHEG00000000560	prpf6	100	97.936	Fundulus_heteroclitus
ENSPLAG00000005974	prpf6	97	93.849	ENSGMOG00000015622	prpf6	99	93.319	Gadus_morhua
ENSPLAG00000005974	prpf6	96	93.199	ENSGALG00000006001	PRPF6	100	92.880	Gallus_gallus
ENSPLAG00000005974	prpf6	100	94.221	ENSGAFG00000021109	prpf6	100	94.221	Gambusia_affinis
ENSPLAG00000005974	prpf6	97	95.869	ENSGACG00000002576	prpf6	100	95.869	Gasterosteus_aculeatus
ENSPLAG00000005974	prpf6	98	91.979	ENSGAGG00000008653	PRPF6	96	93.085	Gopherus_agassizii
ENSPLAG00000005974	prpf6	96	92.561	ENSGGOG00000016876	PRPF6	100	92.136	Gorilla_gorilla
ENSPLAG00000005974	prpf6	100	97.626	ENSHBUG00000004496	prpf6	100	97.626	Haplochromis_burtoni
ENSPLAG00000005974	prpf6	96	93.518	ENSHGLG00000009222	PRPF6	100	93.092	Heterocephalus_glaber_female
ENSPLAG00000005974	prpf6	93	93.457	ENSHGLG00100016600	PRPF6	100	93.021	Heterocephalus_glaber_male
ENSPLAG00000005974	prpf6	100	95.459	ENSHCOG00000011513	prpf6	100	95.459	Hippocampus_comes
ENSPLAG00000005974	prpf6	100	92.505	ENSIPUG00000004912	prpf6	100	92.505	Ictalurus_punctatus
ENSPLAG00000005974	prpf6	96	91.083	ENSSTOG00000002922	PRPF6	100	90.234	Ictidomys_tridecemlineatus
ENSPLAG00000005974	prpf6	96	93.624	ENSJJAG00000000836	Prpf6	100	93.199	Jaculus_jaculus
ENSPLAG00000005974	prpf6	100	97.317	ENSKMAG00000017800	prpf6	100	97.317	Kryptolebias_marmoratus
ENSPLAG00000005974	prpf6	100	96.491	ENSLBEG00000012582	prpf6	100	96.491	Labrus_bergylta
ENSPLAG00000005974	prpf6	96	94.255	ENSLOCG00000004827	prpf6	96	92.447	Lepisosteus_oculatus
ENSPLAG00000005974	prpf6	96	92.667	ENSLAFG00000005272	PRPF6	100	92.242	Loxodonta_africana
ENSPLAG00000005974	prpf6	96	92.455	ENSMFAG00000037542	PRPF6	100	92.030	Macaca_fascicularis
ENSPLAG00000005974	prpf6	96	86.200	ENSMMUG00000015558	PRPF6	98	93.588	Macaca_mulatta
ENSPLAG00000005974	prpf6	96	80.085	ENSMNEG00000045555	PRPF6	100	79.661	Macaca_nemestrina
ENSPLAG00000005974	prpf6	100	97.007	ENSMAMG00000010718	prpf6	100	97.007	Mastacembelus_armatus
ENSPLAG00000005974	prpf6	90	97.714	ENSMZEG00005026539	prpf6	100	97.714	Maylandia_zebra
ENSPLAG00000005974	prpf6	97	97.761	ENSMZEG00005015261	-	100	97.761	Maylandia_zebra
ENSPLAG00000005974	prpf6	93	93.348	ENSMGAG00000006634	PRPF6	100	93.021	Meleagris_gallopavo
ENSPLAG00000005974	prpf6	96	93.624	ENSMAUG00000013969	Prpf6	100	93.199	Mesocricetus_auratus
ENSPLAG00000005974	prpf6	84	92.336	ENSMICG00000017793	PRPF6	98	92.355	Microcebus_murinus
ENSPLAG00000005974	prpf6	96	93.518	ENSMOCG00000001701	Prpf6	100	93.092	Microtus_ochrogaster
ENSPLAG00000005974	prpf6	96	96.989	ENSMMOG00000020419	prpf6	100	96.989	Mola_mola
ENSPLAG00000005974	prpf6	93	94.328	ENSMODG00000017051	PRPF6	99	93.835	Monodelphis_domestica
ENSPLAG00000005974	prpf6	95	97.391	ENSMALG00000000089	prpf6	100	97.391	Monopterus_albus
ENSPLAG00000005974	prpf6	96	87.354	MGP_CAROLIEiJ_G0024814	Prpf6	100	96.296	Mus_caroli
ENSPLAG00000005974	prpf6	96	93.624	ENSMUSG00000002455	Prpf6	100	96.296	Mus_musculus
ENSPLAG00000005974	prpf6	96	93.624	MGP_PahariEiJ_G0026262	Prpf6	100	96.296	Mus_pahari
ENSPLAG00000005974	prpf6	96	93.624	MGP_SPRETEiJ_G0025741	Prpf6	100	96.296	Mus_spretus
ENSPLAG00000005974	prpf6	86	93.196	ENSMPUG00000008673	PRPF6	98	93.196	Mustela_putorius_furo
ENSPLAG00000005974	prpf6	96	93.730	ENSNGAG00000003365	Prpf6	100	93.305	Nannospalax_galili
ENSPLAG00000005974	prpf6	100	97.730	ENSNBRG00000015025	prpf6	100	97.730	Neolamprologus_brichardi
ENSPLAG00000005974	prpf6	96	92.455	ENSNLEG00000010208	PRPF6	100	92.030	Nomascus_leucogenys
ENSPLAG00000005974	prpf6	96	84.137	ENSMEUG00000009824	-	90	84.387	Notamacropus_eugenii
ENSPLAG00000005974	prpf6	96	87.673	ENSODEG00000004841	PRPF6	100	87.248	Octodon_degus
ENSPLAG00000005974	prpf6	100	97.420	ENSONIG00000017406	prpf6	100	97.420	Oreochromis_niloticus
ENSPLAG00000005974	prpf6	96	93.411	ENSOANG00000004920	PRPF6	100	92.986	Ornithorhynchus_anatinus
ENSPLAG00000005974	prpf6	95	91.309	ENSOCUG00000014151	PRPF6	100	90.880	Oryctolagus_cuniculus
ENSPLAG00000005974	prpf6	100	96.491	ENSORLG00000009592	prpf6	100	96.491	Oryzias_latipes
ENSPLAG00000005974	prpf6	100	96.594	ENSORLG00020001458	prpf6	100	96.594	Oryzias_latipes_hni
ENSPLAG00000005974	prpf6	100	96.594	ENSORLG00015018762	prpf6	100	96.594	Oryzias_latipes_hsok
ENSPLAG00000005974	prpf6	100	96.904	ENSOMEG00000012174	prpf6	100	96.904	Oryzias_melastigma
ENSPLAG00000005974	prpf6	96	86.306	ENSOGAG00000007573	PRPF6	100	85.881	Otolemur_garnettii
ENSPLAG00000005974	prpf6	96	92.667	ENSOARG00000008776	PRPF6	99	92.242	Ovis_aries
ENSPLAG00000005974	prpf6	96	92.561	ENSPPAG00000008686	PRPF6	100	92.136	Pan_paniscus
ENSPLAG00000005974	prpf6	96	93.199	ENSPPRG00000008497	PRPF6	100	92.774	Panthera_pardus
ENSPLAG00000005974	prpf6	93	93.130	ENSPTIG00000011184	PRPF6	97	92.694	Panthera_tigris_altaica
ENSPLAG00000005974	prpf6	96	92.561	ENSPTRG00000013765	PRPF6	100	92.136	Pan_troglodytes
ENSPLAG00000005974	prpf6	96	92.242	ENSPANG00000024135	PRPF6	100	91.817	Papio_anubis
ENSPLAG00000005974	prpf6	98	93.139	ENSPKIG00000005627	prpf6	99	94.468	Paramormyrops_kingsleyae
ENSPLAG00000005974	prpf6	90	93.084	ENSPSIG00000007717	PRPF6	100	92.630	Pelodiscus_sinensis
ENSPLAG00000005974	prpf6	99	94.628	ENSPMGG00000008925	prpf6	99	93.905	Periophthalmus_magnuspinnatus
ENSPLAG00000005974	prpf6	96	93.624	ENSPEMG00000016036	Prpf6	100	93.199	Peromyscus_maniculatus_bairdii
ENSPLAG00000005974	prpf6	98	87.147	ENSPMAG00000006144	prpf6	100	87.777	Petromyzon_marinus
ENSPLAG00000005974	prpf6	96	93.518	ENSPCIG00000017909	PRPF6	100	93.092	Phascolarctos_cinereus
ENSPLAG00000005974	prpf6	100	98.978	ENSPFOG00000006431	prpf6	99	98.978	Poecilia_formosa
ENSPLAG00000005974	prpf6	100	99.587	ENSPMEG00000009977	prpf6	100	99.587	Poecilia_mexicana
ENSPLAG00000005974	prpf6	100	99.071	ENSPREG00000017993	prpf6	95	99.071	Poecilia_reticulata
ENSPLAG00000005974	prpf6	96	92.030	ENSPPYG00000011256	PRPF6	100	91.605	Pongo_abelii
ENSPLAG00000005974	prpf6	91	95.098	ENSPCAG00000006536	PRPF6	88	94.444	Procavia_capensis
ENSPLAG00000005974	prpf6	96	92.774	ENSPCOG00000016881	PRPF6	100	92.349	Propithecus_coquereli
ENSPLAG00000005974	prpf6	96	87.248	ENSPVAG00000014316	PRPF6	100	86.823	Pteropus_vampyrus
ENSPLAG00000005974	prpf6	100	83.573	ENSPNYG00000001939	prpf6	100	83.573	Pundamilia_nyererei
ENSPLAG00000005974	prpf6	97	95.021	ENSPNAG00000015606	prpf6	100	93.033	Pygocentrus_nattereri
ENSPLAG00000005974	prpf6	96	93.518	ENSRNOG00000051498	Prpf6	100	93.092	Rattus_norvegicus
ENSPLAG00000005974	prpf6	96	92.455	ENSRBIG00000043613	PRPF6	100	92.030	Rhinopithecus_bieti
ENSPLAG00000005974	prpf6	96	89.418	ENSRROG00000040969	PRPF6	98	92.215	Rhinopithecus_roxellana
ENSPLAG00000005974	prpf6	87	89.735	ENSSBOG00000020632	PRPF6	93	87.543	Saimiri_boliviensis_boliviensis
ENSPLAG00000005974	prpf6	96	93.518	ENSSHAG00000016810	PRPF6	100	93.092	Sarcophilus_harrisii
ENSPLAG00000005974	prpf6	95	94.839	ENSSFOG00015020859	prpf6	100	94.409	Scleropages_formosus
ENSPLAG00000005974	prpf6	100	95.769	ENSSMAG00000008112	prpf6	100	95.769	Scophthalmus_maximus
ENSPLAG00000005974	prpf6	100	96.904	ENSSDUG00000016142	prpf6	100	96.904	Seriola_dumerili
ENSPLAG00000005974	prpf6	100	96.904	ENSSLDG00000025283	prpf6	99	96.904	Seriola_lalandi_dorsalis
ENSPLAG00000005974	prpf6	90	92.054	ENSSPUG00000018260	PRPF6	100	91.600	Sphenodon_punctatus
ENSPLAG00000005974	prpf6	100	97.007	ENSSPAG00000015850	prpf6	100	97.007	Stegastes_partitus
ENSPLAG00000005974	prpf6	97	91.728	ENSSSCG00000029119	PRPF6	98	92.610	Sus_scrofa
ENSPLAG00000005974	prpf6	96	93.220	ENSTGUG00000007221	PRPF6	100	92.903	Taeniopygia_guttata
ENSPLAG00000005974	prpf6	100	96.078	ENSTRUG00000002920	prpf6	100	96.078	Takifugu_rubripes
ENSPLAG00000005974	prpf6	96	89.798	ENSTNIG00000017873	prpf6	100	89.798	Tetraodon_nigroviridis
ENSPLAG00000005974	prpf6	85	94.444	ENSTBEG00000005348	PRPF6	85	92.222	Tupaia_belangeri
ENSPLAG00000005974	prpf6	96	92.880	ENSTTRG00000013068	PRPF6	100	92.455	Tursiops_truncatus
ENSPLAG00000005974	prpf6	98	88.658	ENSUMAG00000021631	PRPF6	98	91.276	Ursus_maritimus
ENSPLAG00000005974	prpf6	96	93.199	ENSVVUG00000014948	PRPF6	100	92.774	Vulpes_vulpes
ENSPLAG00000005974	prpf6	96	92.660	ENSXETG00000012054	prpf6	97	92.234	Xenopus_tropicalis
ENSPLAG00000005974	prpf6	100	99.278	ENSXCOG00000008082	prpf6	100	99.278	Xiphophorus_couchianus
ENSPLAG00000005974	prpf6	100	99.174	ENSXMAG00000015581	prpf6	100	99.174	Xiphophorus_maculatus