EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSPLAG00000006044 (Gene tree)
Gene ID: 106951867
Gene Symbol: si:dkey-85a20.4
Alias: -
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Plus strand
Length: 12267 bases
Position: chrKQ545792.1:25670-37936
Accession: 106951867
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000004355	SpoU_methylase	PF00588.19	6.9e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000009766	-	5423	XM_015039596	ENSPLAP00000004355	1626 (aa)	XP_014895082	UPI00072E571C

Gene Model

Click here to download ENSPLAG00000006044's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000006044's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000006044	si:dkey-85a20.4	85	45.028	ENSG00000059588	TARBP1	99	41.855	Homo_sapiens
ENSPLAG00000006044	si:dkey-85a20.4	99	75.261	ENSAPOG00000016419	si:dkey-85a20.4	99	75.200	Acanthochromis_polyacanthus
ENSPLAG00000006044	si:dkey-85a20.4	84	44.412	ENSAMEG00000003359	TARBP1	99	44.597	Ailuropoda_melanoleuca
ENSPLAG00000006044	si:dkey-85a20.4	99	70.031	ENSATEG00000020266	si:dkey-85a20.4	99	70.141	Anabas_testudineus
ENSPLAG00000006044	si:dkey-85a20.4	83	45.690	ENSAPLG00000007666	TARBP1	99	46.252	Anas_platyrhynchos
ENSPLAG00000006044	si:dkey-85a20.4	84	43.768	ENSACAG00000001142	TARBP1	99	40.453	Anolis_carolinensis
ENSPLAG00000006044	si:dkey-85a20.4	86	44.064	ENSANAG00000022031	TARBP1	89	44.382	Aotus_nancymaae
ENSPLAG00000006044	si:dkey-85a20.4	78	54.990	ENSBTAG00000004517	TARBP1	99	54.990	Bos_taurus
ENSPLAG00000006044	si:dkey-85a20.4	99	41.860	ENSCJAG00000018155	TARBP1	99	41.876	Callithrix_jacchus
ENSPLAG00000006044	si:dkey-85a20.4	85	45.000	ENSCAFG00000011533	TARBP1	98	45.000	Canis_familiaris
ENSPLAG00000006044	si:dkey-85a20.4	85	45.025	ENSCAFG00020027141	TARBP1	85	44.954	Canis_lupus_dingo
ENSPLAG00000006044	si:dkey-85a20.4	85	45.035	ENSCHIG00000011437	TARBP1	99	41.647	Capra_hircus
ENSPLAG00000006044	si:dkey-85a20.4	82	44.290	ENSTSYG00000010382	TARBP1	99	44.436	Carlito_syrichta
ENSPLAG00000006044	si:dkey-85a20.4	78	41.770	ENSCAPG00000010831	TARBP1	99	41.860	Cavia_aperea
ENSPLAG00000006044	si:dkey-85a20.4	85	43.737	ENSCPOG00000013995	TARBP1	99	40.893	Cavia_porcellus
ENSPLAG00000006044	si:dkey-85a20.4	85	45.300	ENSCCAG00000037278	TARBP1	86	45.448	Cebus_capucinus
ENSPLAG00000006044	si:dkey-85a20.4	85	44.937	ENSCATG00000011754	TARBP1	99	41.587	Cercocebus_atys
ENSPLAG00000006044	si:dkey-85a20.4	80	44.036	ENSCLAG00000003655	TARBP1	96	44.195	Chinchilla_lanigera
ENSPLAG00000006044	si:dkey-85a20.4	79	45.496	ENSCSAG00000010100	TARBP1	99	45.573	Chlorocebus_sabaeus
ENSPLAG00000006044	si:dkey-85a20.4	78	44.769	ENSCPBG00000005587	TARBP1	97	40.671	Chrysemys_picta_bellii
ENSPLAG00000006044	si:dkey-85a20.4	83	45.224	ENSCANG00000034343	TARBP1	99	45.297	Colobus_angolensis_palliatus
ENSPLAG00000006044	si:dkey-85a20.4	90	42.895	ENSCGRG00001016690	Tarbp1	92	42.685	Cricetulus_griseus_chok1gshd
ENSPLAG00000006044	si:dkey-85a20.4	85	43.847	ENSCGRG00000016893	Tarbp1	94	43.626	Cricetulus_griseus_crigri
ENSPLAG00000006044	si:dkey-85a20.4	99	61.747	ENSCSEG00000005255	si:dkey-85a20.4	99	66.544	Cynoglossus_semilaevis
ENSPLAG00000006044	si:dkey-85a20.4	99	54.833	ENSDARG00000079055	si:dkey-85a20.4	99	68.394	Danio_rerio
ENSPLAG00000006044	si:dkey-85a20.4	91	43.226	ENSDNOG00000008637	TARBP1	99	41.518	Dasypus_novemcinctus
ENSPLAG00000006044	si:dkey-85a20.4	80	44.512	ENSDORG00000007984	Tarbp1	100	44.705	Dipodomys_ordii
ENSPLAG00000006044	si:dkey-85a20.4	85	45.621	ENSEASG00005000252	TARBP1	99	41.986	Equus_asinus_asinus
ENSPLAG00000006044	si:dkey-85a20.4	85	45.351	ENSECAG00000023673	TARBP1	85	46.681	Equus_caballus
ENSPLAG00000006044	si:dkey-85a20.4	99	58.175	ENSELUG00000012193	si:dkey-85a20.4	99	58.175	Esox_lucius
ENSPLAG00000006044	si:dkey-85a20.4	85	42.957	ENSFCAG00000014183	TARBP1	99	39.928	Felis_catus
ENSPLAG00000006044	si:dkey-85a20.4	80	46.329	ENSFALG00000013565	TARBP1	99	46.241	Ficedula_albicollis
ENSPLAG00000006044	si:dkey-85a20.4	79	43.125	ENSFDAG00000001308	TARBP1	99	43.351	Fukomys_damarensis
ENSPLAG00000006044	si:dkey-85a20.4	100	69.840	ENSFHEG00000007565	si:dkey-85a20.4	99	80.533	Fundulus_heteroclitus
ENSPLAG00000006044	si:dkey-85a20.4	85	61.182	ENSGMOG00000004549	si:dkey-85a20.4	99	61.325	Gadus_morhua
ENSPLAG00000006044	si:dkey-85a20.4	84	44.006	ENSGALG00000011000	TARBP1	99	40.815	Gallus_gallus
ENSPLAG00000006044	si:dkey-85a20.4	100	93.604	ENSGAFG00000007387	si:dkey-85a20.4	100	93.604	Gambusia_affinis
ENSPLAG00000006044	si:dkey-85a20.4	86	70.754	ENSGACG00000005865	si:dkey-85a20.4	99	70.613	Gasterosteus_aculeatus
ENSPLAG00000006044	si:dkey-85a20.4	84	46.423	ENSGAGG00000012102	TARBP1	89	46.181	Gopherus_agassizii
ENSPLAG00000006044	si:dkey-85a20.4	84	44.143	ENSGGOG00000022879	TARBP1	99	44.468	Gorilla_gorilla
ENSPLAG00000006044	si:dkey-85a20.4	99	73.817	ENSHBUG00000008877	si:dkey-85a20.4	99	73.817	Haplochromis_burtoni
ENSPLAG00000006044	si:dkey-85a20.4	85	43.732	ENSHGLG00000011592	TARBP1	99	40.568	Heterocephalus_glaber_female
ENSPLAG00000006044	si:dkey-85a20.4	85	43.949	ENSHGLG00100015169	TARBP1	95	43.808	Heterocephalus_glaber_male
ENSPLAG00000006044	si:dkey-85a20.4	97	56.161	ENSIPUG00000005249	si:dkey-85a20.4	98	51.948	Ictalurus_punctatus
ENSPLAG00000006044	si:dkey-85a20.4	82	44.762	ENSSTOG00000032291	TARBP1	96	44.656	Ictidomys_tridecemlineatus
ENSPLAG00000006044	si:dkey-85a20.4	85	42.131	ENSJJAG00000017840	Tarbp1	95	41.990	Jaculus_jaculus
ENSPLAG00000006044	si:dkey-85a20.4	89	71.133	ENSKMAG00000017546	si:dkey-85a20.4	98	71.133	Kryptolebias_marmoratus
ENSPLAG00000006044	si:dkey-85a20.4	82	73.067	ENSLBEG00000012132	si:dkey-85a20.4	94	72.667	Labrus_bergylta
ENSPLAG00000006044	si:dkey-85a20.4	99	43.450	ENSLACG00000004337	TARBP1	99	43.450	Latimeria_chalumnae
ENSPLAG00000006044	si:dkey-85a20.4	99	52.757	ENSLOCG00000016214	si:dkey-85a20.4	100	52.757	Lepisosteus_oculatus
ENSPLAG00000006044	si:dkey-85a20.4	85	45.060	ENSLAFG00000011394	TARBP1	95	43.436	Loxodonta_africana
ENSPLAG00000006044	si:dkey-85a20.4	85	43.890	ENSMFAG00000041068	TARBP1	99	40.961	Macaca_fascicularis
ENSPLAG00000006044	si:dkey-85a20.4	85	43.927	ENSMMUG00000021703	TARBP1	86	43.927	Macaca_mulatta
ENSPLAG00000006044	si:dkey-85a20.4	85	45.007	ENSMNEG00000045002	TARBP1	99	41.602	Macaca_nemestrina
ENSPLAG00000006044	si:dkey-85a20.4	83	45.580	ENSMLEG00000044182	TARBP1	99	45.652	Mandrillus_leucophaeus
ENSPLAG00000006044	si:dkey-85a20.4	99	68.305	ENSMAMG00000021760	si:dkey-85a20.4	99	68.305	Mastacembelus_armatus
ENSPLAG00000006044	si:dkey-85a20.4	99	73.510	ENSMZEG00005005751	si:dkey-85a20.4	99	73.510	Maylandia_zebra
ENSPLAG00000006044	si:dkey-85a20.4	85	44.076	ENSMAUG00000020968	Tarbp1	87	43.856	Mesocricetus_auratus
ENSPLAG00000006044	si:dkey-85a20.4	85	40.871	ENSMICG00000015280	TARBP1	99	38.144	Microcebus_murinus
ENSPLAG00000006044	si:dkey-85a20.4	85	44.003	ENSMOCG00000004128	Tarbp1	87	43.852	Microtus_ochrogaster
ENSPLAG00000006044	si:dkey-85a20.4	99	66.252	ENSMMOG00000007795	si:dkey-85a20.4	99	65.879	Mola_mola
ENSPLAG00000006044	si:dkey-85a20.4	85	44.051	ENSMODG00000008504	TARBP1	99	40.906	Monodelphis_domestica
ENSPLAG00000006044	si:dkey-85a20.4	99	68.159	ENSMALG00000002916	si:dkey-85a20.4	99	68.159	Monopterus_albus
ENSPLAG00000006044	si:dkey-85a20.4	85	43.497	MGP_CAROLIEiJ_G0031729	Tarbp1	78	58.846	Mus_caroli
ENSPLAG00000006044	si:dkey-85a20.4	85	43.754	ENSMUSG00000090290	Tarbp1	88	43.604	Mus_musculus
ENSPLAG00000006044	si:dkey-85a20.4	85	44.287	MGP_PahariEiJ_G0023326	Tarbp1	87	44.216	Mus_pahari
ENSPLAG00000006044	si:dkey-85a20.4	85	43.816	MGP_SPRETEiJ_G0032846	Tarbp1	87	43.799	Mus_spretus
ENSPLAG00000006044	si:dkey-85a20.4	76	45.404	ENSMPUG00000002802	TARBP1	99	45.404	Mustela_putorius_furo
ENSPLAG00000006044	si:dkey-85a20.4	83	43.603	ENSMLUG00000002414	TARBP1	99	43.746	Myotis_lucifugus
ENSPLAG00000006044	si:dkey-85a20.4	85	44.888	ENSNLEG00000002518	TARBP1	99	41.847	Nomascus_leucogenys
ENSPLAG00000006044	si:dkey-85a20.4	65	56.170	ENSMEUG00000011370	-	65	55.957	Notamacropus_eugenii
ENSPLAG00000006044	si:dkey-85a20.4	68	53.411	ENSOPRG00000013822	TARBP1	68	53.411	Ochotona_princeps
ENSPLAG00000006044	si:dkey-85a20.4	85	43.852	ENSODEG00000005238	TARBP1	89	43.994	Octodon_degus
ENSPLAG00000006044	si:dkey-85a20.4	85	75.499	ENSONIG00000009789	si:dkey-85a20.4	100	75.570	Oreochromis_niloticus
ENSPLAG00000006044	si:dkey-85a20.4	85	44.311	ENSOCUG00000017418	TARBP1	99	41.010	Oryctolagus_cuniculus
ENSPLAG00000006044	si:dkey-85a20.4	99	67.302	ENSORLG00000010529	si:dkey-85a20.4	99	67.363	Oryzias_latipes
ENSPLAG00000006044	si:dkey-85a20.4	99	67.117	ENSORLG00020019264	si:dkey-85a20.4	99	67.179	Oryzias_latipes_hni
ENSPLAG00000006044	si:dkey-85a20.4	99	66.933	ENSORLG00015003276	si:dkey-85a20.4	99	66.994	Oryzias_latipes_hsok
ENSPLAG00000006044	si:dkey-85a20.4	85	43.390	ENSOGAG00000002379	TARBP1	99	40.000	Otolemur_garnettii
ENSPLAG00000006044	si:dkey-85a20.4	85	44.996	ENSOARG00000003434	TARBP1	98	42.978	Ovis_aries
ENSPLAG00000006044	si:dkey-85a20.4	83	45.586	ENSPPAG00000028097	TARBP1	99	45.997	Pan_paniscus
ENSPLAG00000006044	si:dkey-85a20.4	81	45.671	ENSPPRG00000013561	TARBP1	88	45.563	Panthera_pardus
ENSPLAG00000006044	si:dkey-85a20.4	82	44.825	ENSPTIG00000009281	TARBP1	99	44.704	Panthera_tigris_altaica
ENSPLAG00000006044	si:dkey-85a20.4	85	45.493	ENSPTRG00000002124	TARBP1	99	42.184	Pan_troglodytes
ENSPLAG00000006044	si:dkey-85a20.4	85	45.050	ENSPANG00000021933	TARBP1	99	41.516	Papio_anubis
ENSPLAG00000006044	si:dkey-85a20.4	99	56.155	ENSPKIG00000016716	si:dkey-85a20.4	99	56.155	Paramormyrops_kingsleyae
ENSPLAG00000006044	si:dkey-85a20.4	79	45.811	ENSPSIG00000010699	TARBP1	99	45.888	Pelodiscus_sinensis
ENSPLAG00000006044	si:dkey-85a20.4	85	44.421	ENSPEMG00000006888	Tarbp1	92	44.199	Peromyscus_maniculatus_bairdii
ENSPLAG00000006044	si:dkey-85a20.4	90	70.051	ENSPCIG00000029710	TARBP1	98	70.051	Phascolarctos_cinereus
ENSPLAG00000006044	si:dkey-85a20.4	86	98.143	ENSPFOG00000013020	si:dkey-85a20.4	100	98.143	Poecilia_formosa
ENSPLAG00000006044	si:dkey-85a20.4	100	98.524	ENSPMEG00000017857	si:dkey-85a20.4	100	98.524	Poecilia_mexicana
ENSPLAG00000006044	si:dkey-85a20.4	100	95.264	ENSPREG00000022753	si:dkey-85a20.4	100	95.264	Poecilia_reticulata
ENSPLAG00000006044	si:dkey-85a20.4	77	44.803	ENSPPYG00000000102	TARBP1	84	45.207	Pongo_abelii
ENSPLAG00000006044	si:dkey-85a20.4	67	75.658	ENSPCAG00000004808	TARBP1	72	75.658	Procavia_capensis
ENSPLAG00000006044	si:dkey-85a20.4	85	43.270	ENSPCOG00000005666	TARBP1	85	43.199	Propithecus_coquereli
ENSPLAG00000006044	si:dkey-85a20.4	81	60.563	ENSPVAG00000014798	TARBP1	94	38.111	Pteropus_vampyrus
ENSPLAG00000006044	si:dkey-85a20.4	99	70.668	ENSPNYG00000019135	si:dkey-85a20.4	99	70.668	Pundamilia_nyererei
ENSPLAG00000006044	si:dkey-85a20.4	93	41.029	ENSRNOG00000053574	Tarbp1	95	40.965	Rattus_norvegicus
ENSPLAG00000006044	si:dkey-85a20.4	85	42.606	ENSRBIG00000043362	TARBP1	94	42.507	Rhinopithecus_bieti
ENSPLAG00000006044	si:dkey-85a20.4	85	44.937	ENSRROG00000029527	TARBP1	89	45.007	Rhinopithecus_roxellana
ENSPLAG00000006044	si:dkey-85a20.4	83	45.295	ENSSBOG00000034503	TARBP1	96	45.581	Saimiri_boliviensis_boliviensis
ENSPLAG00000006044	si:dkey-85a20.4	83	44.758	ENSSHAG00000000013	TARBP1	99	44.758	Sarcophilus_harrisii
ENSPLAG00000006044	si:dkey-85a20.4	99	52.518	ENSSFOG00015002660	si:dkey-85a20.4	97	58.717	Scleropages_formosus
ENSPLAG00000006044	si:dkey-85a20.4	99	68.984	ENSSMAG00000007081	si:dkey-85a20.4	99	69.045	Scophthalmus_maximus
ENSPLAG00000006044	si:dkey-85a20.4	99	69.613	ENSSDUG00000023566	si:dkey-85a20.4	99	69.797	Seriola_dumerili
ENSPLAG00000006044	si:dkey-85a20.4	99	73.079	ENSSLDG00000020200	si:dkey-85a20.4	100	73.202	Seriola_lalandi_dorsalis
ENSPLAG00000006044	si:dkey-85a20.4	76	57.763	ENSSARG00000012207	TARBP1	75	57.534	Sorex_araneus
ENSPLAG00000006044	si:dkey-85a20.4	85	44.145	ENSSPUG00000015364	TARBP1	99	41.169	Sphenodon_punctatus
ENSPLAG00000006044	si:dkey-85a20.4	99	75.444	ENSSPAG00000007213	si:dkey-85a20.4	99	75.398	Stegastes_partitus
ENSPLAG00000006044	si:dkey-85a20.4	85	44.922	ENSSSCG00000010160	TARBP1	99	45.288	Sus_scrofa
ENSPLAG00000006044	si:dkey-85a20.4	80	45.686	ENSTGUG00000010214	TARBP1	100	45.686	Taeniopygia_guttata
ENSPLAG00000006044	si:dkey-85a20.4	94	63.164	ENSTNIG00000016586	si:dkey-85a20.4	99	68.787	Tetraodon_nigroviridis
ENSPLAG00000006044	si:dkey-85a20.4	79	40.802	ENSTTRG00000008707	TARBP1	85	40.936	Tursiops_truncatus
ENSPLAG00000006044	si:dkey-85a20.4	80	44.694	ENSUMAG00000006730	TARBP1	97	44.810	Ursus_maritimus
ENSPLAG00000006044	si:dkey-85a20.4	63	74.468	ENSVPAG00000007665	TARBP1	73	74.468	Vicugna_pacos
ENSPLAG00000006044	si:dkey-85a20.4	84	45.221	ENSVVUG00000007460	TARBP1	99	44.554	Vulpes_vulpes
ENSPLAG00000006044	si:dkey-85a20.4	83	43.134	ENSXETG00000016224	tarbp1	99	43.053	Xenopus_tropicalis
ENSPLAG00000006044	si:dkey-85a20.4	84	87.097	ENSXCOG00000011779	si:dkey-85a20.4	100	86.968	Xiphophorus_couchianus
ENSPLAG00000006044	si:dkey-85a20.4	64	94.656	ENSXMAG00000009600	si:dkey-85a20.4	100	94.656	Xiphophorus_maculatus