EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000006077 (Gene tree)
Gene ID: 106947113
Gene Symbol: rbm4.3 (1 of many)
Alias: -
Full Name: RNA-binding protein 4B-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 2628 bases
Position: chrKQ545329.1:372167-374794
Accession: 106947113
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000021947	RRM_5	PF13893.6	2.9e-07	1	2
ENSPLAP00000021947	RRM_5	PF13893.6	2.9e-07	2	2
ENSPLAP00000021947	RRM_1	PF00076.22	1.1e-26	1	2
ENSPLAP00000021947	RRM_1	PF00076.22	1.1e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000009704	-	1201	XM_015031924	ENSPLAP00000021947	347 (aa)	XP_014887410	UPI00072DA62F

Gene Model

Click here to download ENSPLAG00000006077's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000006077's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000006077	rbm4.3	99	64.124	ENSPLAG00000006131	rbm4.3	97	63.663
ENSPLAG00000006077	rbm4.3	63	49.275	ENSPLAG00000018569	-	93	49.275
ENSPLAG00000006077	rbm4.3	97	52.941	ENSPLAG00000018572	rbm4.1	65	52.941

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000006077	rbm4.3	100	76.068	ENSAPOG00000002991	rbm4.3	100	76.638	Acanthochromis_polyacanthus
ENSPLAG00000006077	rbm4.3	99	63.944	ENSAPOG00000002953	rbm4.3	99	65.254	Acanthochromis_polyacanthus
ENSPLAG00000006077	rbm4.3	100	79.143	ENSACIG00000021295	rbm4.3	100	79.429	Amphilophus_citrinellus
ENSPLAG00000006077	rbm4.3	99	60.511	ENSACIG00000021311	-	99	62.500	Amphilophus_citrinellus
ENSPLAG00000006077	rbm4.3	99	64.205	ENSAOCG00000008015	rbm4.3	99	65.341	Amphiprion_ocellaris
ENSPLAG00000006077	rbm4.3	100	76.857	ENSAOCG00000007992	rbm4.3	100	76.571	Amphiprion_ocellaris
ENSPLAG00000006077	rbm4.3	99	65.909	ENSAPEG00000017324	rbm4.3	99	65.527	Amphiprion_percula
ENSPLAG00000006077	rbm4.3	100	76.857	ENSAPEG00000017288	rbm4.3	100	76.571	Amphiprion_percula
ENSPLAG00000006077	rbm4.3	100	75.214	ENSATEG00000019395	rbm4.3	100	76.638	Anabas_testudineus
ENSPLAG00000006077	rbm4.3	99	63.714	ENSATEG00000019375	rbm4.3	99	65.242	Anabas_testudineus
ENSPLAG00000006077	rbm4.3	99	61.648	ENSACLG00000010620	-	99	63.068	Astatotilapia_calliptera
ENSPLAG00000006077	rbm4.3	100	80.453	ENSACLG00000010642	rbm4.3	100	80.737	Astatotilapia_calliptera
ENSPLAG00000006077	rbm4.3	52	69.780	ENSAMXG00000040224	rbm4.3	63	75.497	Astyanax_mexicanus
ENSPLAG00000006077	rbm4.3	99	61.080	ENSCSEG00000013659	rbm4.3	99	62.323	Cynoglossus_semilaevis
ENSPLAG00000006077	rbm4.3	99	63.739	ENSCVAG00000008508	rbm4.3	99	63.739	Cyprinodon_variegatus
ENSPLAG00000006077	rbm4.3	100	84.438	ENSCVAG00000008502	rbm4.3	100	85.879	Cyprinodon_variegatus
ENSPLAG00000006077	rbm4.3	98	63.173	ENSDARG00000022129	rbm4.3	99	61.281	Danio_rerio
ENSPLAG00000006077	rbm4.3	99	64.972	ENSELUG00000022155	rbm4.3	99	65.634	Esox_lucius
ENSPLAG00000006077	rbm4.3	98	65.341	ENSELUG00000022150	rbm4.3	96	64.431	Esox_lucius
ENSPLAG00000006077	rbm4.3	99	64.306	ENSELUG00000022168	rbm4.3	99	64.804	Esox_lucius
ENSPLAG00000006077	rbm4.3	80	65.125	ENSFHEG00000023137	rbm4.3	87	66.548	Fundulus_heteroclitus
ENSPLAG00000006077	rbm4.3	100	78.348	ENSFHEG00000023096	rbm4.3	100	80.170	Fundulus_heteroclitus
ENSPLAG00000006077	rbm4.3	55	72.021	ENSGMOG00000004032	rbm4.3	52	69.545	Gadus_morhua
ENSPLAG00000006077	rbm4.3	99	88.184	ENSGAFG00000001935	rbm4.3	99	87.320	Gambusia_affinis
ENSPLAG00000006077	rbm4.3	99	73.778	ENSGACG00000019980	rbm4.3	100	70.308	Gasterosteus_aculeatus
ENSPLAG00000006077	rbm4.3	100	79.603	ENSHBUG00000009051	rbm4.3	100	80.453	Haplochromis_burtoni
ENSPLAG00000006077	rbm4.3	99	61.648	ENSHBUG00000009020	-	99	63.068	Haplochromis_burtoni
ENSPLAG00000006077	rbm4.3	100	63.585	ENSHCOG00000010363	rbm4.3	99	64.903	Hippocampus_comes
ENSPLAG00000006077	rbm4.3	95	59.403	ENSHCOG00000010349	rbm4.3	96	60.117	Hippocampus_comes
ENSPLAG00000006077	rbm4.3	99	61.690	ENSIPUG00000022943	RBM4B	99	62.079	Ictalurus_punctatus
ENSPLAG00000006077	rbm4.3	100	74.716	ENSKMAG00000014541	rbm4.3	100	75.284	Kryptolebias_marmoratus
ENSPLAG00000006077	rbm4.3	99	61.017	ENSKMAG00000017468	rbm4.3	99	59.887	Kryptolebias_marmoratus
ENSPLAG00000006077	rbm4.3	99	63.068	ENSLBEG00000001071	-	99	64.205	Labrus_bergylta
ENSPLAG00000006077	rbm4.3	55	78.010	ENSLBEG00000001025	rbm4.3	86	78.010	Labrus_bergylta
ENSPLAG00000006077	rbm4.3	99	64.672	ENSMAMG00000004715	-	83	65.527	Mastacembelus_armatus
ENSPLAG00000006077	rbm4.3	100	75.429	ENSMAMG00000004701	rbm4.3	100	76.571	Mastacembelus_armatus
ENSPLAG00000006077	rbm4.3	85	79.530	ENSMZEG00005007441	rbm4.3	78	80.479	Maylandia_zebra
ENSPLAG00000006077	rbm4.3	85	56.478	ENSMZEG00005028537	-	81	58.249	Maylandia_zebra
ENSPLAG00000006077	rbm4.3	99	58.523	ENSMZEG00005007417	-	99	59.943	Maylandia_zebra
ENSPLAG00000006077	rbm4.3	100	80.453	ENSMZEG00005028540	rbm4.3	100	80.737	Maylandia_zebra
ENSPLAG00000006077	rbm4.3	100	72.394	ENSMMOG00000012191	rbm4.3	100	72.881	Mola_mola
ENSPLAG00000006077	rbm4.3	91	73.418	ENSMALG00000003032	rbm4.3	95	74.367	Monopterus_albus
ENSPLAG00000006077	rbm4.3	100	72.857	ENSMALG00000015014	-	93	75.692	Monopterus_albus
ENSPLAG00000006077	rbm4.3	87	61.238	ENSMALG00000003001	rbm4.3	86	63.514	Monopterus_albus
ENSPLAG00000006077	rbm4.3	100	79.830	ENSNBRG00000012372	rbm4.3	100	80.114	Neolamprologus_brichardi
ENSPLAG00000006077	rbm4.3	100	78.873	ENSONIG00000018378	rbm4.3	100	79.155	Oreochromis_niloticus
ENSPLAG00000006077	rbm4.3	99	61.648	ENSONIG00000018380	-	99	63.068	Oreochromis_niloticus
ENSPLAG00000006077	rbm4.3	97	57.143	ENSORLG00000012473	rbm4.3	97	57.550	Oryzias_latipes
ENSPLAG00000006077	rbm4.3	97	57.143	ENSORLG00000011589	rbm4.3	97	58.689	Oryzias_latipes
ENSPLAG00000006077	rbm4.3	100	67.898	ENSORLG00000024749	rbm4.3	100	67.236	Oryzias_latipes
ENSPLAG00000006077	rbm4.3	97	57.143	ENSORLG00020012464	rbm4.3	97	57.550	Oryzias_latipes_hni
ENSPLAG00000006077	rbm4.3	100	67.908	ENSORLG00020012482	rbm4.3	100	67.529	Oryzias_latipes_hni
ENSPLAG00000006077	rbm4.3	97	56.857	ENSORLG00020012474	rbm4.3	97	58.405	Oryzias_latipes_hni
ENSPLAG00000006077	rbm4.3	97	57.429	ENSORLG00015013686	rbm4.3	97	57.835	Oryzias_latipes_hsok
ENSPLAG00000006077	rbm4.3	97	56.571	ENSORLG00015013698	rbm4.3	97	58.974	Oryzias_latipes_hsok
ENSPLAG00000006077	rbm4.3	100	67.714	ENSORLG00015013721	rbm4.3	100	67.049	Oryzias_latipes_hsok
ENSPLAG00000006077	rbm4.3	97	57.184	ENSOMEG00000005929	rbm4.3	97	58.807	Oryzias_melastigma
ENSPLAG00000006077	rbm4.3	99	59.664	ENSOMEG00000005918	rbm4.3	97	60.795	Oryzias_melastigma
ENSPLAG00000006077	rbm4.3	100	71.143	ENSOMEG00000005950	rbm4.3	100	71.143	Oryzias_melastigma
ENSPLAG00000006077	rbm4.3	93	62.687	ENSPKIG00000007001	rbm4.3	97	61.696	Paramormyrops_kingsleyae
ENSPLAG00000006077	rbm4.3	64	38.017	ENSPKIG00000007274	-	66	37.450	Paramormyrops_kingsleyae
ENSPLAG00000006077	rbm4.3	99	64.124	ENSPMEG00000024271	rbm4.3	97	63.953	Poecilia_mexicana
ENSPLAG00000006077	rbm4.3	100	98.847	ENSPMEG00000024260	rbm4.3	100	98.847	Poecilia_mexicana
ENSPLAG00000006077	rbm4.3	99	64.689	ENSPMEG00000024263	rbm4.3	99	64.589	Poecilia_mexicana
ENSPLAG00000006077	rbm4.3	99	63.037	ENSPREG00000002156	rbm4.3	97	62.242	Poecilia_reticulata
ENSPLAG00000006077	rbm4.3	100	96.254	ENSPREG00000002093	-	100	96.254	Poecilia_reticulata
ENSPLAG00000006077	rbm4.3	100	80.170	ENSPNYG00000018564	rbm4.3	100	80.453	Pundamilia_nyererei
ENSPLAG00000006077	rbm4.3	99	61.648	ENSPNYG00000018541	rbm4.3	99	63.068	Pundamilia_nyererei
ENSPLAG00000006077	rbm4.3	99	61.326	ENSPNAG00000013053	rbm4.3	99	59.621	Pygocentrus_nattereri
ENSPLAG00000006077	rbm4.3	99	59.079	ENSSFOG00015015563	rbm4.3	99	58.791	Scleropages_formosus
ENSPLAG00000006077	rbm4.3	99	63.636	ENSSMAG00000013644	rbm4.3	99	63.248	Scophthalmus_maximus
ENSPLAG00000006077	rbm4.3	100	70.822	ENSSMAG00000013653	rbm4.3	100	70.538	Scophthalmus_maximus
ENSPLAG00000006077	rbm4.3	100	74.644	ENSSDUG00000018422	rbm4.3	100	74.929	Seriola_dumerili
ENSPLAG00000006077	rbm4.3	99	63.714	ENSSDUG00000018435	rbm4.3	99	64.957	Seriola_dumerili
ENSPLAG00000006077	rbm4.3	99	63.714	ENSSLDG00000017204	rbm4.3	99	64.957	Seriola_lalandi_dorsalis
ENSPLAG00000006077	rbm4.3	100	74.074	ENSSLDG00000017182	rbm4.3	100	74.359	Seriola_lalandi_dorsalis
ENSPLAG00000006077	rbm4.3	100	74.074	ENSSPAG00000008041	rbm4.3	85	75.499	Stegastes_partitus
ENSPLAG00000006077	rbm4.3	99	62.963	ENSSPAG00000008062	rbm4.3	99	64.489	Stegastes_partitus
ENSPLAG00000006077	rbm4.3	100	71.388	ENSTRUG00000023874	rbm4.3	100	72.521	Takifugu_rubripes
ENSPLAG00000006077	rbm4.3	99	61.972	ENSTRUG00000020901	rbm4.3	99	62.500	Takifugu_rubripes
ENSPLAG00000006077	rbm4.3	99	60.623	ENSTNIG00000005668	rbm4.3	99	60.057	Tetraodon_nigroviridis
ENSPLAG00000006077	rbm4.3	99	63.842	ENSXCOG00000006001	rbm4.3	99	63.739	Xiphophorus_couchianus
ENSPLAG00000006077	rbm4.3	99	96.199	ENSXCOG00000005996	rbm4.3	98	96.199	Xiphophorus_couchianus
ENSPLAG00000006077	rbm4.3	99	63.559	ENSXMAG00000021997	rbm4.3	99	63.456	Xiphophorus_maculatus
ENSPLAG00000006077	rbm4.3	100	96.542	ENSXMAG00000025173	rbm4.3	100	96.542	Xiphophorus_maculatus
ENSPLAG00000006077	rbm4.3	99	64.689	ENSXMAG00000011698	rbm4.3	97	63.953	Xiphophorus_maculatus