EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000006107 (Gene tree)
Gene ID: -
Gene Symbol: rbm4.3 (1 of many)
Alias: -
Full Name: RNA binding motif protein 4.3
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 1341 bases
Position: chrKQ545329.1:361091-362431
Accession: ZDB-GENE-040426-1938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000004404	RRM_5	PF13893.6	3.2e-10	1	2
ENSPLAP00000004404	RRM_5	PF13893.6	3.2e-10	2	2
ENSPLAP00000004404	RRM_1	PF00076.22	1.7e-29	1	2
ENSPLAP00000004404	RRM_1	PF00076.22	1.7e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000009685	-	522	-	ENSPLAP00000004404	173 (aa)	-	-

Gene Model

Click here to download ENSPLAG00000006107's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000006107's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000006107	rbm4.3	87	51.095	ENSPLAG00000018569	-	87	51.095

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000006107	rbm4.3	90	82.051	ENSAMXG00000040224	rbm4.3	65	82.051	Astyanax_mexicanus
ENSPLAG00000006107	rbm4.3	93	80.124	ENSDARG00000022129	rbm4.3	50	76.023	Danio_rerio
ENSPLAG00000006107	rbm4.3	85	75.510	ENSGMOG00000004032	rbm4.3	63	76.000	Gadus_morhua
ENSPLAG00000006107	rbm4.3	86	90.580	ENSKMAG00000017456	rbm4.3	95	90.580	Kryptolebias_marmoratus
ENSPLAG00000006107	rbm4.3	89	71.795	ENSLBEG00000001025	rbm4.3	71	71.795	Labrus_bergylta
ENSPLAG00000006107	rbm4.3	88	88.889	ENSMMOG00000012143	rbm4.3	89	88.889	Mola_mola
ENSPLAG00000006107	rbm4.3	85	87.755	ENSOMEG00000021202	-	92	86.928	Oryzias_melastigma
ENSPLAG00000006107	rbm4.3	87	83.333	ENSPKIG00000007001	rbm4.3	65	83.007	Paramormyrops_kingsleyae
ENSPLAG00000006107	rbm4.3	86	72.794	ENSPMGG00000005450	-	75	72.794	Periophthalmus_magnuspinnatus
ENSPLAG00000006107	rbm4.3	87	94.667	ENSXCOG00000006010	rbm4.3	93	94.667	Xiphophorus_couchianus