EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000006115 (Gene tree)
Gene ID: 106938788
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rap-1b-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 627 bases
Position: chrKQ547983.1:15284-15910
Accession: 106938788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000004424	MMR_HSR1	PF01926.23	9.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000009660	-	627	XM_015020946	ENSPLAP00000004424	208 (aa)	XP_014876432	-

Gene Model

Click here to download ENSPLAG00000006115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000006115's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000006115	-	74	35.032	ENSPLAG00000011855	si:ch73-116o1.2	80	36.527
ENSPLAG00000006115	-	75	33.544	ENSPLAG00000003181	-	78	33.544
ENSPLAG00000006115	-	75	31.737	ENSPLAG00000017071	rasl10a	83	31.737
ENSPLAG00000006115	-	75	33.544	ENSPLAG00000005832	RAB13	83	33.544
ENSPLAG00000006115	-	78	30.539	ENSPLAG00000018718	rab22a	83	30.539
ENSPLAG00000006115	-	79	34.320	ENSPLAG00000007015	rab9a	79	34.320
ENSPLAG00000006115	-	81	34.302	ENSPLAG00000022926	rab9a	85	34.302
ENSPLAG00000006115	-	78	30.539	ENSPLAG00000017232	rab22a	83	30.539
ENSPLAG00000006115	-	62	30.233	ENSPLAG00000019120	-	66	30.233
ENSPLAG00000006115	-	81	30.178	ENSPLAG00000015383	rab30	82	30.178
ENSPLAG00000006115	-	77	30.303	ENSPLAG00000020989	rab35b	76	30.323
ENSPLAG00000006115	-	78	32.716	ENSPLAG00000003379	hrasb	85	32.716
ENSPLAG00000006115	-	82	33.702	ENSPLAG00000002398	rasl11b	72	33.702
ENSPLAG00000006115	-	100	72.596	ENSPLAG00000003951	rasd4	98	72.596
ENSPLAG00000006115	-	78	35.714	ENSPLAG00000006777	-	75	35.714
ENSPLAG00000006115	-	79	30.120	ENSPLAG00000005628	rab42a	75	30.120
ENSPLAG00000006115	-	82	30.636	ENSPLAG00000001529	rheb	92	30.636
ENSPLAG00000006115	-	72	35.570	ENSPLAG00000009163	rras	80	37.107
ENSPLAG00000006115	-	78	33.951	ENSPLAG00000009352	KRAS	99	31.156
ENSPLAG00000006115	-	77	31.056	ENSPLAG00000006354	rab15	75	31.056
ENSPLAG00000006115	-	80	30.178	ENSPLAG00000015650	rhebl1	88	30.178
ENSPLAG00000006115	-	77	32.121	ENSPLAG00000011866	rab9b	74	32.121
ENSPLAG00000006115	-	75	30.128	ENSPLAG00000023374	rab2a	73	30.128
ENSPLAG00000006115	-	77	31.395	ENSPLAG00000004043	rasl11a	66	31.395

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000006115	-	100	75.000	ENSAPOG00000013337	rasd4	100	75.000	Acanthochromis_polyacanthus
ENSPLAG00000006115	-	100	81.731	ENSAPOG00000014798	-	100	81.731	Acanthochromis_polyacanthus
ENSPLAG00000006115	-	95	54.455	ENSAPOG00000019479	rasd3	96	54.455	Acanthochromis_polyacanthus
ENSPLAG00000006115	-	100	73.558	ENSACIG00000008211	rasd4	100	73.558	Amphilophus_citrinellus
ENSPLAG00000006115	-	100	82.692	ENSACIG00000006211	-	100	82.692	Amphilophus_citrinellus
ENSPLAG00000006115	-	100	75.481	ENSAOCG00000011925	rasd4	100	75.481	Amphiprion_ocellaris
ENSPLAG00000006115	-	100	81.731	ENSAOCG00000013791	-	100	81.731	Amphiprion_ocellaris
ENSPLAG00000006115	-	100	81.731	ENSAPEG00000014385	-	100	81.731	Amphiprion_percula
ENSPLAG00000006115	-	100	75.481	ENSAPEG00000001236	rasd4	100	75.481	Amphiprion_percula
ENSPLAG00000006115	-	100	83.173	ENSATEG00000004140	rasd4	100	83.173	Anabas_testudineus
ENSPLAG00000006115	-	100	75.000	ENSATEG00000004192	-	100	75.000	Anabas_testudineus
ENSPLAG00000006115	-	100	73.558	ENSACLG00000005453	-	100	73.558	Astatotilapia_calliptera
ENSPLAG00000006115	-	99	73.659	ENSCSEG00000003581	rasd4	97	73.659	Cynoglossus_semilaevis
ENSPLAG00000006115	-	100	82.692	ENSCSEG00000017910	-	100	82.692	Cynoglossus_semilaevis
ENSPLAG00000006115	-	99	71.981	ENSCVAG00000004658	rasd4	99	71.981	Cyprinodon_variegatus
ENSPLAG00000006115	-	100	89.423	ENSCVAG00000014662	-	100	89.423	Cyprinodon_variegatus
ENSPLAG00000006115	-	91	43.814	FBgn0040370	CG13375	70	43.590	Drosophila_melanogaster
ENSPLAG00000006115	-	95	46.701	ENSEBUG00000013908	rasd3	91	46.701	Eptatretus_burgeri
ENSPLAG00000006115	-	100	70.616	ENSELUG00000008115	-	100	70.616	Esox_lucius
ENSPLAG00000006115	-	99	69.268	ENSFALG00000000852	-	99	69.268	Ficedula_albicollis
ENSPLAG00000006115	-	100	72.596	ENSFHEG00000003385	rasd4	100	72.596	Fundulus_heteroclitus
ENSPLAG00000006115	-	100	89.904	ENSFHEG00000016103	-	100	89.904	Fundulus_heteroclitus
ENSPLAG00000006115	-	100	72.596	ENSGAFG00000010126	rasd4	100	72.596	Gambusia_affinis
ENSPLAG00000006115	-	100	75.962	ENSGACG00000019357	rasd4	100	75.962	Gasterosteus_aculeatus
ENSPLAG00000006115	-	99	71.220	ENSGAGG00000022039	-	99	71.220	Gopherus_agassizii
ENSPLAG00000006115	-	100	74.038	ENSHBUG00000003805	-	100	74.038	Haplochromis_burtoni
ENSPLAG00000006115	-	100	73.558	ENSHCOG00000018554	rasd4	100	73.558	Hippocampus_comes
ENSPLAG00000006115	-	100	77.404	ENSHCOG00000015161	-	100	77.404	Hippocampus_comes
ENSPLAG00000006115	-	100	67.788	ENSIPUG00000021888	-	100	67.788	Ictalurus_punctatus
ENSPLAG00000006115	-	100	73.077	ENSKMAG00000000984	rasd4	100	73.077	Kryptolebias_marmoratus
ENSPLAG00000006115	-	100	63.942	ENSLACG00000003581	rasd3	100	63.942	Latimeria_chalumnae
ENSPLAG00000006115	-	100	66.827	ENSLACG00000001282	-	100	66.827	Latimeria_chalumnae
ENSPLAG00000006115	-	100	72.596	ENSLOCG00000017761	rasd4	100	72.596	Lepisosteus_oculatus
ENSPLAG00000006115	-	100	61.137	ENSLOCG00000018104	rasd3	100	61.137	Lepisosteus_oculatus
ENSPLAG00000006115	-	100	74.038	ENSMAMG00000001194	-	100	74.038	Mastacembelus_armatus
ENSPLAG00000006115	-	100	73.558	ENSMZEG00005023931	-	100	73.558	Maylandia_zebra
ENSPLAG00000006115	-	100	83.654	ENSMMOG00000012444	rasd4	100	83.654	Mola_mola
ENSPLAG00000006115	-	100	81.731	ENSMALG00000019233	rasd4	100	81.731	Monopterus_albus
ENSPLAG00000006115	-	100	73.558	ENSMALG00000022582	-	100	73.558	Monopterus_albus
ENSPLAG00000006115	-	100	83.654	ENSNBRG00000001521	-	100	83.654	Neolamprologus_brichardi
ENSPLAG00000006115	-	100	74.038	ENSONIG00000021230	-	100	74.038	Oreochromis_niloticus
ENSPLAG00000006115	-	100	71.635	ENSORLG00020019402	rasd4	100	71.635	Oryzias_latipes_hni
ENSPLAG00000006115	-	100	71.635	ENSORLG00015019530	rasd4	100	71.635	Oryzias_latipes_hsok
ENSPLAG00000006115	-	100	71.635	ENSOMEG00000010545	rasd4	100	71.635	Oryzias_melastigma
ENSPLAG00000006115	-	100	77.885	ENSOMEG00000019524	-	100	77.885	Oryzias_melastigma
ENSPLAG00000006115	-	100	72.596	ENSPKIG00000007853	rasd4	100	72.596	Paramormyrops_kingsleyae
ENSPLAG00000006115	-	100	56.872	ENSPKIG00000018772	-	100	56.872	Paramormyrops_kingsleyae
ENSPLAG00000006115	-	100	59.242	ENSPKIG00000013103	rasd3	100	59.242	Paramormyrops_kingsleyae
ENSPLAG00000006115	-	99	67.805	ENSPSIG00000001290	-	99	67.805	Pelodiscus_sinensis
ENSPLAG00000006115	-	100	69.231	ENSPMGG00000000859	rasd4	100	69.231	Periophthalmus_magnuspinnatus
ENSPLAG00000006115	-	100	82.692	ENSPMGG00000012580	-	100	82.692	Periophthalmus_magnuspinnatus
ENSPLAG00000006115	-	100	98.558	ENSPMEG00000003690	-	100	98.558	Poecilia_mexicana
ENSPLAG00000006115	-	100	73.077	ENSPMEG00000021391	rasd4	98	73.077	Poecilia_mexicana
ENSPLAG00000006115	-	100	73.077	ENSPREG00000017010	rasd4	100	73.077	Poecilia_reticulata
ENSPLAG00000006115	-	100	98.558	ENSPREG00000015955	-	100	98.558	Poecilia_reticulata
ENSPLAG00000006115	-	100	74.038	ENSPNYG00000016378	-	100	74.038	Pundamilia_nyererei
ENSPLAG00000006115	-	100	68.269	ENSPNAG00000005318	-	100	68.269	Pygocentrus_nattereri
ENSPLAG00000006115	-	99	59.242	ENSSFOG00015008777	rasd3	99	59.242	Scleropages_formosus
ENSPLAG00000006115	-	100	75.000	ENSSFOG00015004613	rasd4	100	75.000	Scleropages_formosus
ENSPLAG00000006115	-	100	75.000	ENSSMAG00000016456	rasd4	100	75.000	Scophthalmus_maximus
ENSPLAG00000006115	-	100	82.692	ENSSMAG00000009101	-	100	82.692	Scophthalmus_maximus
ENSPLAG00000006115	-	100	74.519	ENSSDUG00000020340	-	100	74.519	Seriola_dumerili
ENSPLAG00000006115	-	100	83.654	ENSSDUG00000015982	rasd4	100	83.654	Seriola_dumerili
ENSPLAG00000006115	-	100	74.038	ENSSLDG00000002757	-	98	74.038	Seriola_lalandi_dorsalis
ENSPLAG00000006115	-	95	56.436	ENSSLDG00000016267	rasd3	94	56.436	Seriola_lalandi_dorsalis
ENSPLAG00000006115	-	100	83.654	ENSSLDG00000017618	rasd4	100	83.654	Seriola_lalandi_dorsalis
ENSPLAG00000006115	-	100	75.481	ENSSPAG00000021839	rasd4	100	75.481	Stegastes_partitus
ENSPLAG00000006115	-	100	83.173	ENSSPAG00000011401	-	100	83.173	Stegastes_partitus
ENSPLAG00000006115	-	99	72.195	ENSTGUG00000007747	-	99	72.195	Taeniopygia_guttata
ENSPLAG00000006115	-	100	72.596	ENSTRUG00000022489	rasd4	100	72.596	Takifugu_rubripes
ENSPLAG00000006115	-	100	73.077	ENSXCOG00000013226	rasd4	100	73.077	Xiphophorus_couchianus
ENSPLAG00000006115	-	95	65.403	ENSXMAG00000021609	rasd4	99	65.403	Xiphophorus_maculatus