EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSPLAG00000006131 (Gene tree)
Gene ID: 106947109
Gene Symbol: rbm4.3 (1 of many)
Alias: -
Full Name: RNA-binding protein 4B-like
Gene Type: protein_coding
Species: Poecilia_latipinna
Status: putative
Strand: Minus strand
Length: 14600 bases
Position: chrKQ545329.1:349477-364076
Accession: 106947109
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSPLAP00000004445	RRM_5	PF13893.6	3.6e-09	1	2
ENSPLAP00000004445	RRM_5	PF13893.6	3.6e-09	2	2
ENSPLAP00000021963	RRM_5	PF13893.6	3.6e-09	1	2
ENSPLAP00000021963	RRM_5	PF13893.6	3.6e-09	2	2
ENSPLAP00000004445	RRM_1	PF00076.22	2e-28	1	2
ENSPLAP00000004445	RRM_1	PF00076.22	2e-28	2	2
ENSPLAP00000021963	RRM_1	PF00076.22	2e-28	1	2
ENSPLAP00000021963	RRM_1	PF00076.22	2e-28	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSPLAT00000009632	-	3164	-	ENSPLAP00000004445	348 (aa)	-	UPI00072EEA2C
ENSPLAT00000009640	-	3146	XM_015031910	ENSPLAP00000021963	348 (aa)	XP_014887396	UPI00072EEA2C

Gene Model

Click here to download ENSPLAG00000006131's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSPLAG00000006131's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSPLAG00000006131	rbm4.3	97	63.663	ENSPLAG00000006077	rbm4.3	99	64.124
ENSPLAG00000006131	rbm4.3	86	53.333	ENSPLAG00000018572	rbm4.1	66	53.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSPLAG00000006131	rbm4.3	97	61.290	ENSAPOG00000002991	rbm4.3	97	62.319	Acanthochromis_polyacanthus
ENSPLAG00000006131	rbm4.3	100	78.977	ENSAPOG00000002953	rbm4.3	100	77.273	Acanthochromis_polyacanthus
ENSPLAG00000006131	rbm4.3	100	74.644	ENSACIG00000021311	-	100	74.644	Amphilophus_citrinellus
ENSPLAG00000006131	rbm4.3	97	62.130	ENSACIG00000021295	rbm4.3	99	64.103	Amphilophus_citrinellus
ENSPLAG00000006131	rbm4.3	97	62.059	ENSAOCG00000007992	rbm4.3	99	62.216	Amphiprion_ocellaris
ENSPLAG00000006131	rbm4.3	100	78.063	ENSAOCG00000008015	rbm4.3	100	76.638	Amphiprion_ocellaris
ENSPLAG00000006131	rbm4.3	97	62.353	ENSAPEG00000017288	rbm4.3	99	62.216	Amphiprion_percula
ENSPLAG00000006131	rbm4.3	100	78.917	ENSAPEG00000017324	rbm4.3	100	76.068	Amphiprion_percula
ENSPLAG00000006131	rbm4.3	100	77.778	ENSATEG00000019375	rbm4.3	100	77.493	Anabas_testudineus
ENSPLAG00000006131	rbm4.3	97	63.158	ENSATEG00000019395	rbm4.3	97	62.609	Anabas_testudineus
ENSPLAG00000006131	rbm4.3	100	74.929	ENSACLG00000010620	-	100	74.929	Astatotilapia_calliptera
ENSPLAG00000006131	rbm4.3	97	64.012	ENSACLG00000010642	rbm4.3	97	63.265	Astatotilapia_calliptera
ENSPLAG00000006131	rbm4.3	54	76.596	ENSAMXG00000040224	rbm4.3	70	76.744	Astyanax_mexicanus
ENSPLAG00000006131	rbm4.3	100	72.316	ENSCSEG00000013659	rbm4.3	100	70.904	Cynoglossus_semilaevis
ENSPLAG00000006131	rbm4.3	100	85.387	ENSCVAG00000008508	rbm4.3	100	85.387	Cyprinodon_variegatus
ENSPLAG00000006131	rbm4.3	99	60.969	ENSCVAG00000008502	rbm4.3	99	63.352	Cyprinodon_variegatus
ENSPLAG00000006131	rbm4.3	95	67.164	ENSDARG00000022129	rbm4.3	99	66.477	Danio_rerio
ENSPLAG00000006131	rbm4.3	100	64.888	ENSELUG00000022168	rbm4.3	100	65.156	Esox_lucius
ENSPLAG00000006131	rbm4.3	99	69.122	ENSELUG00000022155	rbm4.3	99	69.405	Esox_lucius
ENSPLAG00000006131	rbm4.3	99	68.644	ENSELUG00000022150	rbm4.3	99	67.139	Esox_lucius
ENSPLAG00000006131	rbm4.3	80	87.004	ENSFHEG00000023137	rbm4.3	86	86.813	Fundulus_heteroclitus
ENSPLAG00000006131	rbm4.3	64	67.568	ENSGMOG00000004032	rbm4.3	53	66.216	Gadus_morhua
ENSPLAG00000006131	rbm4.3	100	61.690	ENSGAFG00000001935	rbm4.3	100	61.690	Gambusia_affinis
ENSPLAG00000006131	rbm4.3	91	71.942	ENSGACG00000019980	rbm4.3	99	59.218	Gasterosteus_aculeatus
ENSPLAG00000006131	rbm4.3	97	64.012	ENSHBUG00000009051	rbm4.3	97	63.265	Haplochromis_burtoni
ENSPLAG00000006131	rbm4.3	100	74.929	ENSHBUG00000009020	-	100	74.929	Haplochromis_burtoni
ENSPLAG00000006131	rbm4.3	95	73.030	ENSHCOG00000010349	rbm4.3	100	71.591	Hippocampus_comes
ENSPLAG00000006131	rbm4.3	100	63.202	ENSIPUG00000022943	RBM4B	100	63.764	Ictalurus_punctatus
ENSPLAG00000006131	rbm4.3	100	77.364	ENSKMAG00000017468	rbm4.3	100	76.857	Kryptolebias_marmoratus
ENSPLAG00000006131	rbm4.3	100	75.852	ENSLBEG00000001071	-	100	75.000	Labrus_bergylta
ENSPLAG00000006131	rbm4.3	53	68.984	ENSLBEG00000001025	rbm4.3	79	69.540	Labrus_bergylta
ENSPLAG00000006131	rbm4.3	96	60.221	ENSLOCG00000002755	rbm4.3	100	60.686	Lepisosteus_oculatus
ENSPLAG00000006131	rbm4.3	100	77.493	ENSMAMG00000004715	-	84	76.353	Mastacembelus_armatus
ENSPLAG00000006131	rbm4.3	97	63.050	ENSMAMG00000004701	rbm4.3	97	63.953	Mastacembelus_armatus
ENSPLAG00000006131	rbm4.3	97	64.012	ENSMZEG00005028540	rbm4.3	97	63.265	Maylandia_zebra
ENSPLAG00000006131	rbm4.3	100	70.940	ENSMZEG00005007417	-	100	71.510	Maylandia_zebra
ENSPLAG00000006131	rbm4.3	85	70.470	ENSMZEG00005028537	-	83	70.470	Maylandia_zebra
ENSPLAG00000006131	rbm4.3	86	65.101	ENSMZEG00005007441	rbm4.3	79	64.189	Maylandia_zebra
ENSPLAG00000006131	rbm4.3	95	61.747	ENSMMOG00000012191	rbm4.3	99	61.190	Mola_mola
ENSPLAG00000006131	rbm4.3	89	75.484	ENSMALG00000003001	rbm4.3	87	77.181	Monopterus_albus
ENSPLAG00000006131	rbm4.3	97	61.538	ENSMALG00000015014	-	99	60.857	Monopterus_albus
ENSPLAG00000006131	rbm4.3	91	61.635	ENSMALG00000003032	rbm4.3	95	61.006	Monopterus_albus
ENSPLAG00000006131	rbm4.3	99	63.533	ENSNBRG00000012372	rbm4.3	99	63.248	Neolamprologus_brichardi
ENSPLAG00000006131	rbm4.3	99	62.429	ENSONIG00000018378	rbm4.3	99	62.147	Oreochromis_niloticus
ENSPLAG00000006131	rbm4.3	100	74.929	ENSONIG00000018380	-	100	74.929	Oreochromis_niloticus
ENSPLAG00000006131	rbm4.3	97	56.105	ENSORLG00000024749	rbm4.3	99	54.722	Oryzias_latipes
ENSPLAG00000006131	rbm4.3	100	74.095	ENSORLG00000012473	rbm4.3	100	72.981	Oryzias_latipes
ENSPLAG00000006131	rbm4.3	100	75.487	ENSORLG00000011589	rbm4.3	100	74.373	Oryzias_latipes
ENSPLAG00000006131	rbm4.3	100	75.487	ENSORLG00020012474	rbm4.3	100	74.373	Oryzias_latipes_hni
ENSPLAG00000006131	rbm4.3	99	56.941	ENSORLG00020012482	rbm4.3	99	54.342	Oryzias_latipes_hni
ENSPLAG00000006131	rbm4.3	100	74.095	ENSORLG00020012464	rbm4.3	100	72.981	Oryzias_latipes_hni
ENSPLAG00000006131	rbm4.3	100	74.373	ENSORLG00015013686	rbm4.3	100	73.259	Oryzias_latipes_hsok
ENSPLAG00000006131	rbm4.3	97	55.233	ENSORLG00015013721	rbm4.3	99	54.190	Oryzias_latipes_hsok
ENSPLAG00000006131	rbm4.3	100	73.538	ENSORLG00015013698	rbm4.3	100	74.652	Oryzias_latipes_hsok
ENSPLAG00000006131	rbm4.3	97	59.302	ENSOMEG00000005950	rbm4.3	99	58.807	Oryzias_melastigma
ENSPLAG00000006131	rbm4.3	100	72.549	ENSOMEG00000005918	rbm4.3	100	72.829	Oryzias_melastigma
ENSPLAG00000006131	rbm4.3	97	74.425	ENSOMEG00000005929	rbm4.3	100	74.444	Oryzias_melastigma
ENSPLAG00000006131	rbm4.3	94	65.774	ENSPKIG00000007001	rbm4.3	100	64.326	Paramormyrops_kingsleyae
ENSPLAG00000006131	rbm4.3	97	63.663	ENSPMEG00000024260	rbm4.3	99	63.739	Poecilia_mexicana
ENSPLAG00000006131	rbm4.3	100	91.117	ENSPMEG00000024263	rbm4.3	100	91.117	Poecilia_mexicana
ENSPLAG00000006131	rbm4.3	100	99.138	ENSPMEG00000024271	rbm4.3	100	99.138	Poecilia_mexicana
ENSPLAG00000006131	rbm4.3	99	63.636	ENSPREG00000002093	-	99	64.589	Poecilia_reticulata
ENSPLAG00000006131	rbm4.3	100	91.954	ENSPREG00000002156	rbm4.3	100	91.954	Poecilia_reticulata
ENSPLAG00000006131	rbm4.3	97	64.602	ENSPNYG00000018564	rbm4.3	97	63.848	Pundamilia_nyererei
ENSPLAG00000006131	rbm4.3	100	74.929	ENSPNYG00000018541	rbm4.3	100	74.929	Pundamilia_nyererei
ENSPLAG00000006131	rbm4.3	100	66.391	ENSPNAG00000013053	rbm4.3	100	65.565	Pygocentrus_nattereri
ENSPLAG00000006131	rbm4.3	100	63.661	ENSSFOG00015015563	rbm4.3	100	62.568	Scleropages_formosus
ENSPLAG00000006131	rbm4.3	97	62.941	ENSSMAG00000013653	rbm4.3	97	61.628	Scophthalmus_maximus
ENSPLAG00000006131	rbm4.3	100	78.348	ENSSMAG00000013644	rbm4.3	100	75.499	Scophthalmus_maximus
ENSPLAG00000006131	rbm4.3	100	77.778	ENSSDUG00000018435	rbm4.3	100	76.923	Seriola_dumerili
ENSPLAG00000006131	rbm4.3	97	64.431	ENSSDUG00000018422	rbm4.3	99	63.636	Seriola_dumerili
ENSPLAG00000006131	rbm4.3	97	64.035	ENSSLDG00000017182	rbm4.3	99	63.068	Seriola_lalandi_dorsalis
ENSPLAG00000006131	rbm4.3	100	77.778	ENSSLDG00000017204	rbm4.3	100	76.923	Seriola_lalandi_dorsalis
ENSPLAG00000006131	rbm4.3	100	77.778	ENSSPAG00000008062	rbm4.3	100	76.353	Stegastes_partitus
ENSPLAG00000006131	rbm4.3	97	61.424	ENSSPAG00000008041	rbm4.3	83	62.029	Stegastes_partitus
ENSPLAG00000006131	rbm4.3	97	59.706	ENSTRUG00000023874	rbm4.3	99	62.500	Takifugu_rubripes
ENSPLAG00000006131	rbm4.3	100	75.637	ENSTRUG00000020901	rbm4.3	100	73.938	Takifugu_rubripes
ENSPLAG00000006131	rbm4.3	100	73.219	ENSTNIG00000005668	rbm4.3	100	72.934	Tetraodon_nigroviridis
ENSPLAG00000006131	rbm4.3	100	90.544	ENSXCOG00000006001	rbm4.3	100	90.544	Xiphophorus_couchianus
ENSPLAG00000006131	rbm4.3	97	64.140	ENSXCOG00000005996	rbm4.3	100	64.607	Xiphophorus_couchianus
ENSPLAG00000006131	rbm4.3	97	63.848	ENSXMAG00000025173	rbm4.3	99	65.625	Xiphophorus_maculatus
ENSPLAG00000006131	rbm4.3	100	90.544	ENSXMAG00000021997	rbm4.3	100	90.544	Xiphophorus_maculatus
ENSPLAG00000006131	rbm4.3	100	97.414	ENSXMAG00000011698	rbm4.3	100	97.414	Xiphophorus_maculatus